XLOC_037630 (gene) - C. hemisphaerica

Overview
NameXLOC_037630
Unique NameXLOC_037630
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_331:709731..716635+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037630 ID=XLOC_037630|Name=XLOC_037630|organism=Clytia hemisphaerica|type=gene|length=6905bp|location=Sequence derived from alignment at scaffold_331:709731..716635+ (Clytia hemisphaerica)
GTTATTTCAAGTAAGGTCAGATGATCAATCATATCGAAGAAATTCTGCTA TTTGGAACTTAAAACTATGGACAGTTGAGCAGCGAAAATATTATATGTTG AGTAGTTTCGTGTTTTATCGCACTGAGCTATAAAgcttattttttatcaa tttcatcGTCGAACTTTAAACGTTAAAATCTTAAGGCGGAATGGCTGAGA ATTCACGGAGAATGAAATTTCGTAGACTCTTTACCGTTTGCAATCAAAAT GGTACCACCGCTGCAGCAGAGGAAGAATTTGGCGAGAAAGACAAGAATGG GATAATAAATGGAAGTGTTAGGCTCGATGAACAAGATAATGAAGGTAAGA GTTGAGCATTTTTAGGCAAaaccaatacaccttttcgaccgtagccgcca attaccgcacgggcattttttgtctgCGTTTTACCATCCTTAAactgtct ttttttttcacaccgaaagacaatagaaaaaatcataaaaagagGATTTG ATCGAGTTTAAGGTGGttaatcaaatataaaaatggCGCCTGAACGCGCG ACTACGGTTGAAACCAATATATTAGTATATTAACTCTTTGGcggttttaa taattttccaaattcgaaaaatattttacacacCTTCAGTATAAGGGGGA TATCTCTTGAAAGGTTGCTAATACACCCtataaagtatatattttctgaa agctgGGTAAAAAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtccaaattttta ttttgctgacgtcagcagggatttcaagtttgaaaataaaaaataaattt ttacgtaaaaatatttttttttcacaaaaatcatcATAAAATCCAAAATA ACTGTTAGTTTCCTCTAAAACTTTGtacaaatgttcttatatacaaTATA ATCAAATGCTGAAAATTTTAGACCTAAGGctttacaaaaaatgaaaatat tgatatttcgGTGAACGCGTAAAATGACAGAAAATGGtataaaattgtaa taaatcTACTATCAGTTTCATGACATGAAATTCTTCTTATGAGTCTATTT CAAGGGTTCAAAATCATGAAACTAGACATTCTAAGTATATTTAATGATGT CTTCTTGCTAGGAATTGGCCAGTTAATAtgtccattttcaaattttaacc atGTACGGCAATAACGTGAGCTATGCTACGTCCATTCAGGGTGTCATGCG GTAACTTGAAAATCAGAAATGTCCACGAGATGAAATTGGTCAAATGACCT TTGTGTTGTAAACAAAGGCCATTGTATGTGATTTGAGCAAGTAAATCAGT GATAAATCCAAGTGCTAGTCATTTATATGGTCATGGAGACGGCTTGTGCA GCCTGGTCTTTGTCGTCACAAAATGTTGAATTATATACGAAAACTTTGAA CCACACCACAAGAGCTTGGGTCCAATGTCCAATGAGAGCCACTTTGTATG CAAATTGAGTGTTCTTTCAGAATTATACAAATAAGATTTAGTTAGCCTTG TTGTGGCTTGAAAACTGGATTATGAGACATGTTACTAATGTCATTTCATC TGACAAAAATGTGGGCGTGTGGACACGTATACCAATTCAACCCCCATGGA TATTGTGTGATAGAATGAGTTACTCTTTacaaataatttgaagccaaaaC ATTACACAAACTATAAAAGTTCATTCTGCATTGATTTCGACCATAAAAAC CAGTTGAATCTGCTCAAATCTTCTTTAAAGTCAACCAGTGTGGCTgcttg aaattgaatatttcaatgtttttattttgcagCTTGTCAGCCTACATATT ACTATTGGCACACGGGTCTATGATCATTCAACTGAGACTTTTCCGTCTCT AATAGCATAAGGACACCTGTACATATAAAAATCACGGGTTTTTATAGCCT AGAAACTCTGTTTTTCTCAATAATTTAATGGGGGGTCGTTAACGACCCCC ATATCCGCCAAAGAGTTAAAAAAaggttgttttaaaaaaaattagaaaat taaaCAGTGAAGTACAAGTATTAaacattttccttaaaaataagattaga gagcgtcaactgtagatCTCAAATCAATTGGGGGATCAGGTCCATGTGTc gaataataatgataataatttatttacaaCCACCCATTACCGGGTAAGGT TGGACATAGAGTCATGACTCTCGCCCATGAGGCCTATTCAATTCAGAGAG TTACGACTCTATGTCGagctatcaaaaaagaaaaaaaaaagaaaaattac tttttcttgcttaagTCAAGAATAAAATATTGGTTTAATGAAACATGACG CCAAATATCTGAGAGTTACCCCCATCTTGGTATGTTTGAGTTGTAGAAAC TTAATTACTTTGATGagtaagttttgaaaattttgtataagtgaaaattt gaatagatAGAAGTTGATACAATCATTGGGACTTCTAAACCTTTTTTAAG AAATAGAAACAGGTCACCCCAAATTTGGGataactctcggacgggaacTT TATATACACGATTATAGCACCCCTTAATAAAAACATTAGATTAGAGTCAT ACATTTGAGGTGAGTCACCGCTCAGATTCTGCACTGATGATTTTACAACA ATCaccaaaagaaaatcatttcgaTCATTTGCCAATAAAAAGGGTGCAGG ATCAGAATTTTACGATCCACACTATGGGAAAATAAAGGACTACAGTAACT AGattctaaaaatatttctatcacAGTTATTGTTTATTTCTTTAGACGAA AGAATTCCTGCCTAGAAAGTGGGAACAGCCCGTGAGAAAAGGTTAGAGTA ACAGTCTAACAGTAAGAAGAACAAATTGGAAACCATATTCACAGCAGACC ATTGCAGTCTTGTTGTGTCACACAGCAAGGGGTCATTAACAGGCTACAAT ATGCTTTTTCACTATTTCTAATTTTCACCTTTCATttcctttgcttgaaa aaagaacaaagtAGCATAAAAAACTGGTAGCTTAGAAAATATTCtggaaa aatagaaagaaaatgaTAAAGCGAAACGGAAATGGGCCGAGAAAAACATC TGAGTACGGTCTTGGATGTACACAAGAATTGATTTTGAATGTGAATGGAA TTTATCTCAATAATGGTTATTCTACAGACTGGGGATACCATTTCGGAGAT AAAAACGTTGTTCCGAAAGCAGAAAAAATTAAGCGACGGAAAGGTAAGCT ATTGTATTTGGTAACCTGTCccaaactcttcttcgctgacCGAAAAAATA ACGCGAAGTTCGACATATGGTAAATTTTTTCAAGATACAAAAAACGGCCG CGGACGGGTGGTACAGGCTACCCATCTGGTGgttcaaaatgatttttcaa cgTCTTTAGACTGACAGATAACAGATAGATAGAGATGATAGGGAGAAGAT GTTTATCATGGATAATTCAGTAATCTAAGAGAACTTTTACGCAGTCGTTC GATTATTTTCACGGGGTCTACAGTCAGCTAgttcggctatctatgaactg aacgaaaTCTTGGAAGGTGCGGAGATTCGAACCACAAAATCCTGGATTAC CATGGTATTGACGCCTTTTCCTATCGGCCATCACTACTTAAATCTGCTTA ACCCCTACATGACAAGATTACTAGACCTTTAAGGAAGAAAAATAACCCAC TCTATTCTCGAAGAAAAAGTGCTACGGTAAGGTCGATATTGGACTTTGGA TAAACCACCCCACAGTGTTGAAATAGGCGAGATGTACCCATACTAAAAAC GAAGCTCCTTTCATGATCAAATGAATCGTATATTGAAGAAACCTCATCAG AAAAAAATGGCGGTTTCCAAGATTAAGTTTCcgtcaaaaattatttcttt aattaaggtaatagaccttatcagagtttttgatttttctaaaaaagtga tgcattgtgggattgtttcgagtgtattacaatagaaatctcttaggaat tcctcgagggaattctattgtaatacactcgaaacaatcccacaatgcat cgcttttttagaaaaatcaaaaactccgataatgTCTATTCCAAATGAAT TTTTATATACTTTCGTTTTTAGTGTTGCCCACAGTACTGATGAAAGAAGA TGATGACACATGGCACGAACGTCAGATCAACGGACGGAAATATATCCGTG AAAAGATGAACGAATATATCGGTGCATTGACTGTCCATGGGCTTACCAAA GTATTCACAGGTAAATCTACTTTCAGTTTACTTTTATCTTTGAGGCGAAT CAATGCTTTTTGATGGAAGGAGAATGTGTGATAAATACTCCCTACTTTAT CGGCCTCTTCATATGAATTCCGTAGGGAATTTCCCTTCTGTCCACTATTT CTCTCAGTTTGAACCACAAGTGTTTTGTGGTTTAGAGATGCTAGCTAAAT CGATCCAGCCAGccagccagggtgcagtatacagtgctgacgagtcctaa taaggaccaaatgcatatgctgctctcctgagtgaatatagtgggacaga aattcttatttcttcacatatatatatataatgtcCGGGGGATATTAGAA AAATTGTGGAACACTTACACTCATCATGTCCACGGGGTAAATTTAATCTC AAGTGGGTCGAATTGATGTTTATCCCGGTGTAAAACAAGTGTCTAGGGGC TGAGTAATAGAAATCTCCAGCGGTAGATTACTGTAAAATGTGCATCGTTG TtgatccagagtctctatagtAATTCCATGATTACtgtaaaaataatata tcctccacccccaaagaacagattttttttctgtaagAGCCAACTTTgga atcatcatcatcaaagaTTATCTAAAAGCAGCCAGCAGTAACTGGATCTA GATCACTTTAACATAATAACCCAATACTGCTTTTTGGATCAGTGAAAAAC AGGTGATTTGAGGCTTATAAGATCTGGTCCgtaccatagatttataaagc ccgaagggctagatgtcgtgctttaaaaTAAGCCAtagcaggcaaaaaaa aagtgattatcggaaaaaaaaatttcaaaaataacccGCGAAGCTTGGTC TagtgctgaaattctattgtaatgccACGTGCCTTAgttaggatttccta cctaaccacggcacacttttcagcaaaagtacgccatctagccctttggt TACTCAATTATTTTACCCCCGTGTTTTTACAAGAGAAATTTCCATGTAAT TTGCGTTATCTTTTCTTACTACAGGTACCAGATTTGAATCTCTTTTCTGG TTGTTCATGCTTTCTATGGGAACCTTATTGACCGGATTTGTGGTTTTCGG CCTGGTAACGAAATACTTAGAGCACCACGTGTATGTCCAGATCAGTTCTC AAATGGTCGATGAGAAATCGTTCCCTAGTATTACAATATGTGATGAAAAT AAACTGTTTGAGAATTATTATGCTTACTGTGGATTGCAATGTCACCATCC AGAGGCTCAATCAACAAAAGTGTGTCAAGAAAAATGGATGCATTTGAATA ATGTAAGTGCGTACATGGATAAAAATAATCGCTGGACGAACGGTCTTTTT ACAATCAATGCTTGTTATACGTGGGGAAGTAAAGACTGCAATAACTTGAA ATTCCTCAAATCAGTTCATCGTTATAATGATGCATGTTTCACATTTAATT TTGATGGAAATCTGGCTGATATTTACGGGcattttttgattgatttcacT TTCAATCATACTTTTGCGAACGAGCCTGCAGACCGTGAAACAACAATTAT AGCCTTACCCCACGATCAAGATATAGTTGAGTTAGACTTTACATTGCGTA ACCAATTAGAACCGCTGAAAACTTTAACAATGGTCTTTGATAACATCCAC ATAAAACGTCTCCCCGCACCATTCCCCTCTAACTGTACTGATGAGAAAAT AATGGATATTTTCCCTGGCGGTTATTCCCGGCGTTCGTGCATTGAAACAC AAAACTATATCCGGATGTATAAACAATGTGGAGACGTTGTTGATTATGTG AGACAATTCATGACGGAGGAGTTACACAAGGAGCATGCGCGGAATGAAAG CATTGTTGACACATGTCAATGCATCAGACAGTTTAGCAAACTCGAAAGCA TTAAGGCTTACTGTCCTTTCCCATGCAATGAAACTGAAATGTCCGTTCTA ACTAATTTCAATCGCTGGACCAAAGAAGAAATGAAGAGTGCTACTGAGCT ATTGGAAACTAGAAACTTGTCTAGCTACCGTCTGGATTTTCAATATCAAA GAGTAGATTCTTATAGACTGATTGAAGAAATGGAATTGTATACTTTGTAC CAGATGGCATGTGAAATAGGTGGTTTTGTTGGGTTGGTTATTGGTGCATC TATTCTATCTTTTATTGAAATCTTCACTTTGGTATCACTTTCGATTTACA GGCGCTTCCAATATCCGAAAATTGAGTAAATTTATTGGTTCAAAAATTCT GACAGCGTAGACACGAACCAGTTTGCATACAGTGTTTACCCATATAACAT TAACAAAGATGCATTAATACAATCTCGCGTAACAGAACGTGAACGAATTG TAGCGAATACTTTTAGCAATTGACAGTGGCGAGACAAAATATCGGATTGT AAAGATTTTCATATCGGTCTAACACTCCGAATGTTGGCAATTCCTGGCTC AGAGAAattaaggcatgtccaaatttaccttaattttttaactaaagttg catatcattaataggaacatttttgcataatttctttttcaaaattttgc tgacg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059827TCONS_00059827Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059827-proteinTCONS_00059827-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_331supercontigscaffold_331:709731..716635 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0.02 0 0 0.05 0.06 0.1 0.09 0.05 0.1 0.46 0.01 0.09 0.15 0.01 0 0.24 0.44 0 0 1.12 1.03 1.96 2.26 7.58 5.5 0.08 0 0 0.02