XLOC_037627 (gene) - C. hemisphaerica

Overview
NameXLOC_037627
Unique NameXLOC_037627
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_331:669273..672820+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037627 ID=XLOC_037627|Name=XLOC_037627|organism=Clytia hemisphaerica|type=gene|length=3548bp|location=Sequence derived from alignment at scaffold_331:669273..672820+ (Clytia hemisphaerica)
TTGATAACCAAAAAAAGGAACActgaaaagtttttatttgttGTACCTTT
CTTTTCAAAGAGAAAGTCGCTCTAAGTAAGGactattttacaaaatatta
tcACAAAATTATCTATTCCGTAATAATAACAACACAGTGTCTGGTTCAGG
GTATGACAACCTTTTTCACAGACCAACTGGGACCCCTTCTCATCAAATAA
ACCAAACCTCGCTTCAAAATATTATTCCATTTGTCCTATCCCctctgaat
tttctgacttgaaaaaaatggattttaaacATAGTGATTTAAACCCCCGG
CCATAAAAACATATGGGAatatatcaatccccatcgagtttcagttcgtt
atttttacccccactggctagAAAactcctaccgggtctgtgagaaggcg
TGTTGTATGAGGAAAATCAGGCTGTTATCTACTGTCGATGAAAAGTATAT
ACTCCCGATATCAAATTGCTCAAATTACACTCTCAAAATACACTCCTCTA
CTCATAAAAGGAGCTACAAACCAACATTGCTAAAATAGTAGGGAGAAATT
AAGCAATTAAAAATAGTGTTGTTTTGTTCAGCCAAAAGCAGCtattttcc
acttttttcactttttgaagcttgatatctcgagttaggtagaGAAATCA
Cccatactcgcaatatatctctaatcttaatttttttagagctttccaaa
aatatacaacaggtctctcttttctcaagctaaaatatttattaaatttt
gaccctatgatttttgcctgggactgtcatatttgtccgaaaatcacacc
aaaatatccaaaaaaaattggcacctatgttattttgattcccttacctt
tccaaaaaatgtaaaacaagtgctttgaccgaGAGGAAGTTGTGACTTGG
AttgtgaagaaaaaaatagatGTACTTTAgccatttctaaaaaatctaaa
atttcgttttttcaaaaaatctaaaattccgcaaaaataatcaaaaagta
TGAATGTTACGATATTTAAACTACGGAAGGCAAAACATTTTTCAGCCTTG
AGCAAAATGAGAGAAATATCTTCGTTACTTGTTAACACATCAACTGTCAA
TAGCATCTCTTTCAGCGATAAGTGTAAACGctttgctttcttttttttcc
tatTTGTAGTgtctaaatttgaaataaaaatagtgTTTTAAGACACCACT
GAATAACCTATTGTTCAATTTACACAATTTCAATAATGCACCCCAAATCT
ACCAAGTATTTAATTTGTAAGTGGATGAGAAATAAAGTCATTTTAAGCTG
AATGTAacatattttttggaatttaacTAAATATCTCCTCAGGAACATAT
TCAGTAGTTGTGGTCGTGCttgttgttgtagttgtagGTGTGGTCGTTGT
GGTTGTAGGAGTGGTCGttgtggtcgttgttgtagtcGGAGTGGTTGTTG
TGGTTGTAGGAGTGGTCGTTTTCGTTGTTgtaggagtggtcgttgtagtA
GTTGGAGTAGTCGTTGTCGTTGTAGGAGTGGTCATTGTAGTTGTAGGTGT
GTTCTTTGTTGTAGTTGTAGTTGTAggtgtggttgttgttgttggagtgg
tcgttgtggttgtaggagtggtcgttgtagttgtaggagtggtcgttgta
gtagttggagtggtcgttgttgttgttgtaggagtggtcgttgtaggtgt
ggtcgttgttgtagttggagtggtcgttgtggttgtaggagtggtcgttg
tagtagttggagtggtcgttgtagtagttggagtggtcgttgtagtagtt
ggagtggtcgttgtagtagttggagtggtcgttgtagtAGTTGGAGTAGT
CGTTGTCGTTgtaggagtggtcgttgtagttgtagttgtaggagtggtcg
ttgtagtagttggagtggtcgttgtagtagttggagtggtcgttgtagtA
GTTGTAGTTGTAggtgtggttgttgttgttgtagttgtaggtgtggttgt
tgttgttgtaggaGTGGTCGTGGTAGTAGTTGGAGTAGTCGTTGTAGTAG
TTGGAGTAGTCGTTGTCGTTgtaggagtggtcgttgtagttgtagttata
ggagtggtcgttgtagtagttggagtggtcgttgtagtAGTTGGAGTGGT
CGTAGTAGTTGTAGGTGTGGTCGTAGTTGTAGGAGTGGTCGCTGTAGTAG
TTGTAGTTGTAggtgtggttgttgttgttgtagttgtagGTGTGGTTGtt
gtggtcgttgttgttgtagttgtaggtgtggtcgttgttgtagttggaGT
GGTCGTTGTGGTTGTAGGAGTGGTCGTGGTAGTTGTAGGTGTGGTCGTTG
TAGGTGTGGTCGTTGTAGTTGTAGGTGTGGTCGTTGTCGTTTTTGTTGTA
GGAGTGGAAGTTGTTGTAGTTGTAGAAGTGGGAGTGGTCGTTGTAGTAGT
TTGAGTGGTCGTTGTAGTAGTttgagtggtcgttgttgttgtaggCCTGG
TCGTtggagtggtcgttgtagttGTGGTCGTTTTCTTTATCAAACACTCG
TCATTTCGACAATACCTAGCGTAGTAACAATATTGATTGCAATAGTCTGC
CACAATTCTATCTCGATAAAGCCCACGGTCAATGTAACGAGAATTAGGAC
CTGTCCAGCTCCATTTACATAAGCATTCACCAGTAGTCAAACATTGACCT
TTACCAAACAAATGACATTTAACGTTGCATTTCTTTTTCGGTTTCGGCGT
AACCACGCTTACACATTTAGGGTTTCGATACCACCTGTTGTAGTGACAGG
ATGTCGTACAATAATCAGCTGTGATGCGGTTTCGATTCGTACCTTTGTTA
ACATATTGTGAATTAGGACCCGTACATTTCCATCTGCATAAGCAGCGACC
GTTCGGTAAACACCGGCCGTACGCTTTATTGTTTTTTTCGCATCTAGAAT
GACATTTGGTTGATGGAGCTTTGGTTGTTGTCGTTGTagtggtggtcgtt
gtcgtCGTGGGTTTTGAAGTTGTCGAAAGAAAGGGTGTACAGACACGTGA
CCACGAAGGCGTGTAGTGACATGGTACTCGACAATGATCTGCTTTAACTC
TCTTATCTAGTGACCCTCCAGTGAGAGATACTGCATTAGGTCCAGTCCAT
CCCCACCAACATAGGCAACGACCATCAGGTTGACAGACACCAGTACCTGG
TGTAGGATGCTCACAGCGTTGGTCGCAGTGTCTCCTGACTCTGCCTCGAT
GACTGCCAACAACTTGACGTGTTCTATATCTCCTTGACGAGTGACCATAG
CTATGGTATCTTGCCAAAACTATACCAATGCATAATGCAAAGATAATTGT
GATTAAGGTCGACTggttcatttttgaaatcagcCACGACAATGTCTTGA
TTTAAAGtgacaagtaaaaaaaattctgaattcTCCCTTTAAAATCCAAC
AGTTTTGTAAACCGCTTGTAGTTCTTGTGAACCTCTTGTGAACCTTCTTT
TCAGCTAGTCAAATACGGAAATGaagtgattttgaaaaatgtccaaat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059814TCONS_00059814Clytia hemisphaericatranscript
TCONS_00059815TCONS_00059815Clytia hemisphaericatranscript
TCONS_00059816TCONS_00059816Clytia hemisphaericatranscript
TCONS_00059817TCONS_00059817Clytia hemisphaericatranscript
TCONS_00059818TCONS_00059818Clytia hemisphaericatranscript
TCONS_00059819TCONS_00059819Clytia hemisphaericatranscript
TCONS_00059820TCONS_00059820Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_331supercontigscaffold_331:669273..672820 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.1	9.43	4.28	3.44	0.67	0.35	7.7	12.4	69.52	111.89	9.9	60.63	6.87	5.77	3.93	3.94	0.98	1.34	0.39	0.2	0.14	0.16	1.74	2.14	0.5	0.39	0.39	0.61	0.71	0.33