XLOC_035970 (gene) - C. hemisphaerica

Overview


Name	XLOC_035970
Unique Name	XLOC_035970
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_285:213370..219980-

gene from alignment at scaffold_285:213370..219980-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_035970 ID=XLOC_035970|Name=XLOC_035970|organism=Clytia hemisphaerica|type=gene|length=6611bp|location=Sequence derived from alignment at scaffold_285:213370..219980- (Clytia hemisphaerica)
GTGTCAATCCAATGTGAAAAAGCTTGTGAATTAAAATTGATGAATAAGCA
AACGATATCACTCTTATTTAAAAACGAAACCTTTAGCTTGTGATATTTTT
TCAGGATCCCAAAGATTTCCTTAATCAGATTCCTGAAAATTATCACGGCA
TCGAACCAATTGTGATAGTGGGTAAAGGTAAGTTTACTTCATCGTAACAT
ATCCTGTACTCTGCACCAGAGTGTATCTCACGTTCATCGCTTTGTAGTAT
TGCCTCTACGGCAATGAATTTTGAAATTAGCCGTAGATACTGGGTCTGTG
TACAGACAACCTATCCTGAAACAAGACTGCAAACACAGTAAATTATAAGA
ATTGATATTTTAGCCTTATAATTTTTTGGAAATCAAAAATTAAACATAAC
TCAAGAATTAGTCGAACGTGCGTCGAAGTTCTCTGTACCAAAGTGTATCT
CACGTTTATCGCTACGGCAATGAATTTTTTAAATTAGCTGTAGATATTGG
GTCTGTGTGCGTCTAAGGCACGGTAGGGATGTACTCATATTTTTTTATAA
AAGACCTTGTCTGTTTCCCAAATTTTAGCGGAAAAGATTTTACAAAGCGA
TAAAGAAGTTAACATTGGACGTTTGTCACCTGAATGGCATGTGGAACTTC
ATTTCAGAATTGATAGTCTACTCTCGAGCCCTGATTGGTGCAAAGTCATG
ATGGTTACAAGCGGTAAATACATACCAATTTTCAGCTTGATGGGAATTTT
GTCCAGGGTGTGGTGAAATTTTTACTACCTTATCGGCCAAAACTTAGTCG
CTCTTAATTTTAGTCGACCTTAATTATTAGTCGGCCCTAATTTTAGTTAC
CTCNGTCTTAATTTTAGTCGACCTTGATTATTAGTCGGCCCTAATTTTAG
TCACCTCGTCAAAACTTAGTCACTAAGGGCCGACTAATAATTAAGACCGA
CTAAAAATTATATATTATTATAATTGTAAATTCTTTGTTAAAGTAATATC
TATATGAAAAGTAGGTTAAGGAAAGCTTCATTATAAACTTTTAATTTGGC
CCAAATTTTTAGTCGACCCTAATTTTAGTCACCAAGCCAAGATTTAGTCA
CTTAGGCCCGACTAAGTTTTGTCCGATAAGGTACTAATTCTACCTAACTA
ATATTATTCTGACAGTGGATGTACCTATTGGAACTCCTATAATGCGCATG
CGTAATTTATCGGTTTTTTTTAAACCGTTAGTGGTTAATCTCCATAATGT
ATAAAAAGTAGTGAATACCCTCAGGGTTGGGATGGCTAACTATATGTCGC
TCTTTATTGTCGTTTTTCCTTGTCATTTCTCGTTATTTCTCGTTTTTATT
CGTCTTTTTTCGTTTTTCTTCGTTTTTACATGCTCGAGATTATTTCTTTT
TTCATCCCACGCTTTCAGTTGCATCAAATCCTGTTCAAACATAGCCATAG
GCACTGGCTCTTACACCTACACACCTCGATTTTATCTCTCTTTTCCCTAT
CTCTGCTTTGTTCAAACCTTATGAAATATTTTTTAAATTGTTTTTGTTAT
CTCCCTTTTCCCTATCTCTGTTTTATTCAAACCTAACACCTAACAAATCA
TCCTTCGATTTGTTTTTGTTATCTCCCTATCTCTGTTTTATTCAAACCTA
ACACCTAACAAATCATCCTTCGATTTGTTTTTGTTATCTCCCTTTTCCCT
ATCTCTGTTTTGTTCAAACCTTATAAAATATTCTTTAAATTGTTTTTGTT
ATCACCCTTTTCCCTATCTCTGTTTTGTTCAAACCTTATAGTCCAGGGGA
ATTTTGGTCATTTTTTACCGAACCCAAAATTTGCGTACACATGGAATTTT
TTGATTGAAATGTGTTCATGGGGTCATTGGGATTGAAAAACCGTCGAGTG
CCACCTGGCACACCTTGAGCATTTTCCATAATGGCGGAATTTTCAAAATG
GCGGATTAAAAAAAATTCAAAATTTTGATATCTTCAAACCTAAGCACATT
ATATACCGTTGGAAAGGATTTTTTATGCTGAACAACATTTTTGTCTACGA
AAAAGTCTGAAAATGTACTCAATGTGAGTAATAAGTGTCCGAAGCTAGGT
CGGTGATGTCATCATTTTTCGGACATGTGCTTTTTTTGTTAAAACTATCA
AGTGTAATATACTGTTGGAAAGGATTTTATATGCTGAACAACTTTTTTGC
TTACGAAAAAGTCTGAAAATGCACTCAATGTGAGTAATAAGTGTCCGAAG
CTAGGTCGGTGATGTCATCATTTTTCGGACATGTGCTTTTTTTGTTAAAA
CTATCAAGTGTAATATACTGTTGGAAAGGATTTTATATGCTGAACAACTT
TTTTGCTTACGAAAAAGTCTGAAAATGCACTCAATGTGAGTAATAAGTGT
CCGAAGCTAGGTCGGTGATGTCATCATTTTTCGGACAAGTGCTTTTTTCG
TTAAAACTATCAAGTGTTATATACCGTTGGAAAGGATTTTATATGCTGAA
CAACTTTTTTGCTTACGAAAAAGTTTGAAAATTCACCCAATGTGAGTAAT
AAGTGTTTGAAGGCATGTAGCTGATGTCATCACTTTTCAGAAACCTGTCT
TTTCCTTTTAGCTTAAATATCGAATCTTCAGAAACTACATATTGTATTTA
GTGAAGCTACGTCAGAATTCTTTTATCTGTATTACTTAGTCAAACTTGAA
AATTGAATTAATTGAAGAACATTATTATATAGAATTGAGTTTCTCTTTAT
TTATTTTCTAGTGAAAGAAAAATTATAAGTTATAAAATGATTGAACAGAA
AAGTTAGCTGAAGACAGAAAAAAGTTTGCTTTCGTTGGAATTTTCTGGTA
AGTCTTAAAATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNTAATCCGCCATTTTGAAAATTCCGCCATTATGGAAAA
TGCTCAAGGTGTGCCAGGTGGCACTCGACGGTTTTTCAATCCCAATGACC
CAATGAACACATTTCAATCATAAAATTCCATGTGTACGCAAATTTTGGGT
CAAACCTAAATTCCCCTGGACTATTATAAAATATTCTTCAAATTGTTTTT
GTTATCACCCTTTTCCCTATCTCTGTTTTATTCAAACCTTATAAAATATT
CTTCAAATTGTTTTTGTTATCACCCTTTTCCCTATCTCTGTTTTGTTCAA
ACCTTATAAAATATTCTTCAAATTGTTTTTGTTATCACCCTTTTCCCTAT
CTCTGTTTTGTTCAAACCTAACAAATCATCCTTCGATTTGTTTTTGTTAT
CACCCTTTTCCCTATCTTTGTTTTGTTCAAACCTCGGTTCAAACCTAACA
AATTATCCTTCGATTTGTTTTTAGGCGCAAGTTTTGGGTCTCATGGGTAT
AGGGTGCCCGCCTTAACACTTCAGCAACGCCCAAACATGCGTTTAGAAGT
TGGAACAAGTCTTAATCACAACGACAACTACCGGACGTTAGAATCAGTTG
CTCTAAACACCGACTACCACGTCATCATACAACAAAAATACGTCAAAAAC
GGAGTTTATAAGATGACGGCATTTTTGAACGGCGTTGAAATCATGAGAGC
TGACAACACACAACCGAGACAATTCTATAATGTAAAAGCGCTCGCTTCGA
CTAAAATGACGAACGCTTGTGACGTCACAATAAGCGATTTCAAAGTCACA
AATTTTGTATAAAGCTGTAAATATAATGTTTTTGTTTTTTTTAATTATCG
ATACTATTATATTATCTGGTCTCCAAAATATTTGGTTCTTCTTACAGGCG
AGACCAATTTGATTAGTTGTTTTACGGGCCCTGACCAACCCTGAAATTCC
AAAAATCGAAATAAAAATAAAATTCACTACATTTTTATTTGCATTGCTTT
ACAGACTCCCA

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00057104	TCONS_00057104	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00057104-protein	TCONS_00057104-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_285	supercontig	scaffold_285:213370..219980 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.49	5.19	2.91	2.57	0.23	0.06	0.5	0.47	1.44	1.16	0.39	0.94	5.8	3.63	2.12	1.19	0.58	0.64	8.72	8.04	1.26	0.91	3.47	2.97	1.13	2.09	0.63	0.5	1.72	1.79

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XLOC_035970 (gene) - C. hemisphaerica