XLOC_035741 (gene) - C. hemisphaerica

Overview
NameXLOC_035741
Unique NameXLOC_035741
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_282:21194..25700+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035741 ID=XLOC_035741|Name=XLOC_035741|organism=Clytia hemisphaerica|type=gene|length=4507bp|location=Sequence derived from alignment at scaffold_282:21194..25700+ (Clytia hemisphaerica)
aaaagtttttggaaaacAGGAAAAACACTTTGGCCAGATCACTATAAGTT GAATTAATTTCGAAAGCCAATACGATTTCAGTTAAAGAAGGTACAGTATG CTTTTGTCTATTGgtttaatataatttttcaatttgctAATCTTTGTCCA AAATTTACGTTGAAAGTATAGAGGATGGCTCAGTAGTTTTCCAGCAAATT TatgtaaaagtgaaaaatgtaaaaaaaaaaaatctttcgcaGCAAGATTA AAATTCTACACACACATAGAAAACCTTATTCCAAACTTTTGGCAATAATT CGATTTCACTTTTACTTTAGAACACTATCGTCTGATAACCTCGAAACGAA GATGATCACATTGTCTTGGAAAGAGTTCACAGTAAGTTTAATTCAATTCT TTCTGGTTTAGACGAACTGAATCTCTACTAtgtaacatttgatttttaTC GCTTTGCGGTAGCTAACGGGAGGCAAGGGGTGTTGGGATTTGcccaataa ttttttgagaaatacatacttttttataaattttctgaTAAATTACTAAT TTTTAATTCTATTTCTCTAAATGAAATTATAAGTGCATTTACTGGCCatt ttaaacttaaattttcttttcaaacttcCTTCTTCGGGTCAAACAATGGT TGGCCTTCACCAAacttcacccccccccccccaatatcaAATGCTTCCTA AGGTGTCGAAACATCCCCTTAAGTTATTTCCAAATtggtttcttttcaaa tttgaaatgccCCTATCTGTTAGTTTTTGGTCATACAAAAATGTATCAAT GAAAGAAatgaatctttgtttttttttgctttctttgcCTTTCGCGAAAA AGTTGTAACGCGAACCTTTTCACCGGAAAGGCTTTCTGGCTTATTTCCAA ATAAAAGTAACAAAAGTCAATAAAAACAGTTAATCCTGAGTTCGGTTTAC TCAACTCACAAGATTCTCCAAATAAAAATTATCTGAATCTTCCTGATCTA ATCCAAATACGACTTATGGTGACAGGGAGGCCTTAATGTAAAACAAACTT CGTAATTCAAACCCAGTCGCCTTCTCTTATCGATATGCAAATATTTCGCA AGATTTGTTTAGATCTTAATGTCAAAGTGAGCTACCCGATAAAGCCCACG GAAAATTAAGGCCGGTCTACTTTTGCACAAAATGAGCGAcaactttttaa cgtttttgtaaggtcattggtcgttTGAAAAGTAAAGCAATTCCACTTTC GCTTGAAacttttttaacgatgaaaccTTTTCTGCAGGCAAAAACCTTTA ACAAAAGGTTTTTGCTCATTTTTGCGGGAAAGTGGAGACCGCCCTTTAAA GCAACAATCAGTCGAATTTGGGACGTTGTCACGTGGGACAAAATACgcag agattttttttggaaagggGATAAAAAAAGCACACTCGTCAACATTTCCT CGCTATACGCTTCGTAACTCCTATTCGAACATGCTCTTTGACATGACAAA TCAAGGTTTGGATTAATGACAGAAAAGTTAACTGCTAGTCTACTTAAATT GGTTGAACTGCGTAGTTATACTTTTCATACTTCTGAGTACATCTCGAACG ATCAATTGAGCTTTCGAGAAAAATATATCCCCAATTTTCAATCCAGTCAA TTTTCTTCCCAATCGGGTAAGGTCTGAAATTTGGTGTAATACTATACTAT AGGGGTGTACATAAATCCCTTCAAAATAACTGGAGCATCCAGGGTATTAA ACTATTTTCATTTGGATCCAAAATGGATGTGCCAAAAAGTACGACCTcct taacatgtttttttctaaagcccTTACAGTAACAGAAATCTTTTTTAATG ccatttaatttaatttatttcttgGAATAAgatagacgatgttatcgtcc gttacagtgatagtaaaggcgggaaaaaatggcggtatggcgttatgggc ggtatacggaaaaattatcggcgggagagtttcgaagactggcaactcta ccgagtgttaactcttttcggcaaaaaaacccgtttgcgaattttcttcg gctttgggcttNCTGAAATTTGGTGTAATACTATACTATAGGGGTGtaca aaaatcccttcaaaataACTGGAGCATCCAGGGTATTAAACTATTTTCAT TTGGATCCAAAATGGATGTGCCAAAAAGTACGACCTCCTTAACATatgtt tttttctaaagcccTTACAGTAACAGAAATCTTTTTTAATGCCATTTAAT TTGTTTCTTGGAATAAGATAGCGtataatgaaaaatgaaaaatgaaaaat gaaaaaaaaatagactTGAAAACCTTTGAATCACCATCAATATTTCATTT ATTCAACTTTAGATACTCGTCTTATTGTCGCTTGGTCATTTTCGGACAAT ATTTGCGGACACTACATGTTCAATGAAAACCAAATGCCAAATCGCCGAGA CAAGCAGTGGTGACAAAGTCAATGTAGACTGcagtaacaaaaacataaac GACTCGTGTCTATACCGAATCCTATCCACCTACTCAAACATCTCACAAAT CGAAGACTTAAACCTATCCAAGAACAGATTATCTAGATTCATCATTAATA ACAATCCAATCAGAACAGTTCTACAAAGCCTATTATACTTGAACTTGAGC AAAAATAGTTTTACAACAACCCCATCATGGCTTACTGAGCAGACGCCACA ACTTTTGGAGCTCGACCTCAGCTACAACAAACTCCATAACATATCGAGTC GTGATTTCTTAAACACCACAGGATTTCGAACCGGTATCCCATCTCTGATG ATCCTACATCTTAACCATAACCGAATCTCAACGCTCCACGATCAACCTTT CATCCAAGGATTCCAAAATCTCCAACGACTCTTCCTAAACAATAATCTTT TCGATTTTTCAGATTCCTGGCAACTAGAAGGATTATCCAAGCTCATTATT TTAGATCTTTCCTATAACCACATCGCAAGACTCGATACTCAAACATTAAC TTTCTCCAAACAGCTTTCCTTCTTGTATCTTCATCACAATCAGATCCAAG ATCTGTGGTCCCTGACTTTCGTAGAGTTCAGACAAATGAGTTATTTATCC TTATCTCACAACAATATCACAAGAATACATAATTATGCAATCTCCAAAAG CCTCATAGAAACACTTGATTTAAGTCATAATAGAATCAATATCATCCCAT TTGAATCTTTCATGGATACTGATATCTATAAACTGTATTTGGGTCACAAT CCCTTGAAGTGCGATTGCAAACTTAGGAAAGTTTTGGACATAACAGTTAA TCAGTATGTTGAGGGAACCTGTACTACCGACaatcttttcaacaaattaA ACAACATCACTGACACTTTGTTGGAGATCAAATGCGATGCTTGCCAAATC ATTGATTGTCAAATCCACGAAAAATGCATCATTGTGCAATCTGATGTCTT CCCCAAAAAACCGACTCCGAAATGTGTTTGCAGGTATGGAAAACTACCAG ATGGCGGATGTGATCCTTTGCCTCGATGTAATCTTGAATGTCAAAACAAC GCTTCGTGTATTGTAAGTACGGCTGCAACATCCAAGTGTGTTTGTACAGC TAATTTTACTGGGAAACTATGTGAATCTCATTTTAATGGTAGCCTAACAA CGTCATCGACTACCGCCCGTAATACACAACGTCCGGGCGTGACGCCTCTG AGGAAACACTCACCCTTAAGTACAGGCGTGATTGTGGTTGTCAGTCTTGT TTCAGTAGTTATTGGATTAATTTTTGGAGTTTATCTGTACCGAAGAATCA CTCTTGGTGTTAAGGTGCCCCATAAACAATATAAACCATTTTTCATCAGA GGCGACGATCTTCTGAAAGGATGAACCAAATATTGGTTTGTTTGGAAACC TGGAACAATCGCAAAATTGATGATTCGATATTGGAATGATTTTGAATCGG GCGTTCTCTTTCGATGCTTTCACTTGCCAGAATAGTAAATACTCGATAGA GTAAAGGTTTGATTGACCAGAAACTGGAAGTAGGATAGTTTGTCTAGGAG TATTTAAATTCAATCGATGGATATAggttgaaaaaatataaattgatgtt AAAAAAGGCCCTGATATTATTTGTTACAAAAGAAGAAGAGAAAAGAAGAC ATTTTCGAACGATGACATACGTGCATTTGAGCTGCGTATTCTAGCTGCTT TAACtactttaaaatctttaaaaaaactgggacaagctggagtttttaca agctcttatgtgatttggttggtcgttaggttaatttcattactttttct aaagaacgtgtcatatctattacttcaaatgaccaattagtgaagtatct tataacaactccagctcatcccaaaaaACTATGGTGAAGTAGCTATACGC GCCCTTAGCTGCCGTGCCGTAAACTTTTAGGTAAATAAGGGTTTCAGTAG AGATCCAGCCTTCTGAAAATGGATTgcactttttccatataatatTGAGG TTTGAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056724TCONS_00056724Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056724-proteinTCONS_00056724-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_282supercontigscaffold_282:21194..25700 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.03 0.05 0.04 0.02 0.6 0.29 0.11 0.16 0.16 0.14 0.07 0.16 2.39 1.82 4.62 6.2 1.6 1.57 2.31 0.64 0.16 0.22 0.04 0.04 0.02 0.28 0 0.02 0.02 0