XLOC_035349 (gene) - C. hemisphaerica

Overview
NameXLOC_035349
Unique NameXLOC_035349
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_268:94536..102210+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035349 ID=XLOC_035349|Name=XLOC_035349|organism=Clytia hemisphaerica|type=gene|length=7675bp|location=Sequence derived from alignment at scaffold_268:94536..102210+ (Clytia hemisphaerica)
CGTGACTGGCCGACACCTTATACCGTAGTATCTCTGGGTTATAATATCAC GCGCTGTGCGTATATGTATTTTGATTTCCCAATAACTACTTCCCCTCGTC CCGACTGACAATCAGTAGGTAGGTGTGCGCCACGCTGCAGACGAACGACA GACTGCAACAGACGACGGTCGACAACGCAACGCAACGTCAAACAACGTGG ATACACTTTCCTTCTGTTTTGTATTCACACTTGTAGCATTCATATCTCAT CAGTTACTGCAACAATTTCAATCCACAAGGATGCCCTACAGAGAAGAGGA GTAAGTATTTATGCTTTAgacggtcatcgaaaaattgttctattcgcgtc acccgcccgcatcaaattttctgctgattttcgggacgaccctggacacc gccgtacattgtacggtgtTGTACGGTGGGTGTACGGTGGGGTGTACGGT GGATTTCGAGTTAACCTATTTCACCACCGTAccaaattgatttcagtttc AGAAAGCATGCAAATTTTTAGACATTCAACCGTGGTCGGACTTACTGAAA AACTTCTAAgtcggaaaaactttctttGGTACATTAAGTTTGACCACAGA ACTTGTCTTTCGCGATCGCATTCCCACCGTACTACCgtagttggtctaat gtcgacatccgtcttctaatttcgacacccttctttttagagataggaac aatagaaactgaggaaggtcggaatcactgattgactttgattagcgtga tgagaggaaaaaatctttagtctatcagtgatttcgaccttcttattatt ccaatctataaagaaggatgtcgaaattagaagacggatgtcgaaattag aagacggatgtcgacattagaccaacttacggtattgtACGGTGGGAAAT TTAATGTACGGTGGGAAAATGGACGGTGTTTTCAAAGTtgggtgcggaga tgcggagatgcggaaaaaaatctgggaaaagcaatttgttcttttaaagt atagcttttttctcaattgctttgacgaccatcgaaaaattgttttgcag GCGTTACCACCCGCCCAGCTGTGAGTTACTGgcggcgtgattaaaaaaag ctgggaatgtttttgaccgcccgtccgcccgcatgcatttttaacacccg ttgcgatgCGAACAGAGCATtatttcgatgaccgccttagAGTCCCCCCT CCCAGTTCGGGCGACCCGTCTAGTTTGCGAATATGAATGGGCCATTTCTA GAATTTGTCTGTGACAGGAGGGGGGCGAACGAcacaccaaaattcgaaat ttccaaggcctgagaagaaaatgtatgaattttaaggcaattgaactaaa aaaggcaaaaaagagtggaatttctgaTGTATTCTACAAAAATACATgaa tttttatcggaatttccaaccaccactgccagacggtgtcaatcgaacga atcgaacgtcGAATCAAAAATGTATACTTAATATCCTGACTGTCCCAGAC Gattcaaggctgagatatagaagaacgagtataggcgtttgcgcctgcgt ttggtgactgacagtttcagtttcagtttcactactttcactttcacttt cactttcagccagcgagtgagcgagcatgataattgatttccgggtcaaa atgtttgacacttgaaccaatcgtttgcttacctttcttgcgtggtcgtc atttgaatttcagtattcagtGCTTATGAAATACGGTTGTTATAAGGGTA TCAAACTCCTCACTAagagggaacagatcatagattcgaattgaacgcgt aattactaatcaggcacgacgcaacgggtacggcagggACGGCGGctgcc gtaccagattttcacaaaaatacctgaagttttcctcttcgtcggtaaaa tcgctataaaatcgcttaaatttcctcattcgccgtaccagatataaaaa gcttccgtcgtgcctgctaatagcaattaacaatacataacgcgtcgata tctcttcactcccatgaaatgtgattcaaaattaaagtgatgagcacgaa aacaaaatcaagaattggaaaatttgacacccagagggatcgaactcgga aacccatgcTTATGAGACAAACGCTCTAACCATTTGAGCTAACCACAATT GAAAGAGTctgagggaaagcttgaagttatgagaaagaaaaaggaaagaa agaaacaagaagaaaattagttcccgctttgatgttattatcgaaacaaa aggatcagtcacgccgacattcctttccacacgtcagcaatctagttttt ataaatataacaactagattgtaaggttcattctaaaaaagaatagtcgt TTCTTTAGACCAGCTACGTTCTATGCTAAAGTGTTAAAGTGTTCCGGTTT TTACCAAAAGAAAGCCAGTGATCTTATTTATAGCTTTTTAGCAGTGTATA ACACTGTGGACGCCCAcgcgggctagacggcaaattgatAAAGTGCcaaa cgttttgcaacatttcaaaatttgtttgcCGCGGGAGAAAACAAAGTTGC GACTATTGATGGACAAATGTTTCTGGAAAAGGAGGATAACtagttgaagg ctgaaactttgtttACTTAACTTTTGGTTACTTTTGATTGTCTTCGAGCA TATAGTTCTGGCAAGAATCTTTTGATCCACACCACAATCTTTGTTAAATC CACAACTCTTGAAGGAAAAATGGAACANGTCTTCGAGCATATAGTTCTGG CAAGAATCTTTTGATCCACACCACAATCTTTGTTAAATCCACAattcttg aaggaaaaatgGAACAGCAGAGAGGGCACCCTGTATAACCACGGATTTGG TAGTGAGGTCACctagcacataaaaacgtaagaatacttcagatggtgat taagcataaaatttggcacagatgatccttagagggtctaaaacttaatt ttaaacagtaacaccaaattttgccacatggcaacctgccagatgacgtc atcaggttggctgggcaaaaaattatttttttgaaaatatttaaaatctg atggttccagcaGAAAGAGcatgctgataaaaattgaggtataaaacatg ccttgaaaatcttcctatcaaaagttatggaggttgaaagNcatgaaatg ctgataaaaattgaggtataaaacatgccttgaaaatcttcctatcaaaa gttatggaggttgaaagttttttgatgacgtcatcataagcttttccagg caaaacttaaaaacctcgtaattttggtacaaattgaccaaatttcatgt tttatacatgaattcatatcTGCTGTTAcgtaatttcaaattatttggaC CAATCTACTTGTTAACACACATTTGTCCTAGACGCGAGTGGTCTTTTGCT TTGAAGCTATCATTGATGTTTGGTACTAGAACTTTTGTTTCTAGAATTTT CCAAGTATATATCGTTCTCTCCTTTTCTGCAGTGAGTATATCTTAAGCTG CATGAGACTTTCCCAGTAATTTTGAGGTGTTcctcttataaaattatcag aaaaagggtgaggaattaaaaaatcacattcgctaattctagttctttca ttatCATGTAGTTTGTTTCACTTTTTCGATTCTTTACCATGGGAttgtct caaaaaaaaatttatttctgccgaaatggattttcttttcatttgggatt cttctttcagaaaaacttattctttacttataactttttgttcctctatt tccagaggccccttgaaaatgggtcctaccacctttttgaCTCATTTGCA AAAAGTTGGTACTATAGTTAGACAAAAATTGTGTCTATCCGACTGACACG TCAACAtagtttaaaaaaactttaattaaGATAACAATCTTGTCTGTCTc accatgaaggtaataaagatatagatggagagaaaacgtctcggtaatga cctaaatggtggttgaaatcttttataaatctattcaaagcggcttttct ttgatgtaccatcattggaagcaaaaaacattaatttataactttataag aacagaaagaggctggtccgtttattttgaaaaacttaattttgcgagaa atcttggttaaaatgcgattcgaaatagtttcaactgatttaaggataaa agaatatattgatttcataaggatatatttttgggcgggcattttgtgaa aattggtagtcgcatcacattatcattgaaagtttcttatcttaaaatct tcacgtctaagtgggcagcggttttcatatgggcattatgggcagcttcc cctagcagtttggagtattgtgcttattatgtgaagtttttttacaattt ttcatgacaaggctattattttccaatatacttgttaaaaatgtaatgtc ttttcattcatcttaaacaTTCCCgtgagtatacccaaaattaatcatct tattcccaaagcaaccaaacagctgtttgcttccgatgataaatcagaat agaacaaaggGCATTGATTCACCATCTGtatttattaccttcatggtctC ACATTTCTTGTATCAGGAAATTGGATAAACTATTCAAAAACTTGTCTCAT TTAGTCCACCTTTTGAGGATAATGGTTTGAACAACTGGTGCGAAGAACTG TGGAAGAATGATAAGAATCGTTTAACTCCTGATCAAGATTATGAATTGGA TTTGCAAGGACGTACTCGTTTCTCTTATGACGGACCAGACATGGCTGCTG ATCCTCTCTTTGCTTCTGTATCTAGAGAAGCTCTTGCGAGACCAACAtat aaaggtttgttttttgaTCAATTGAATATACAGATGCTATATGAAAGTGA ACCATGATTTTTCGTCTGTCCCTTGAGCACCTTGAGCAAAGAGAATTGAA ATATGTACACTATAGTTTAGCGAATTTATTCTTATTAAGACacacgtttt cttttataagaacatggggcttcaatggccaaaatgttaagaacaagtta agaatattttaaggctttgtgtaCTCAAAAACAAccgttttcttaggaaa atgggtgaAAATGGTCTCAAAAagcttgaaacccaaaaagttaagaacat cccttcaaggcttcaaaattttggatgttctcattaaaaaaaacgtgtaa agttATCAACTATGACAATCAAGAAGACAAGACATACAAGATCGTTTTTT AGGGTATTCATTGTCTcatttttgttaactttttatcaattttcatacAG CCTTTGTTGCTCTCTTGGACAACTACGAAACAGCCACTGGTGTAGCTGAA GAGGTCACCCCAAAAGAACTACGTGAGAATTGGGAATTCATTAATGCATG CTACAAGACCGACTGTATGCGACTTTGTTATCAATATCTGAAAttcaaaa agataatcaataaaTCACCTGAAGAATTCAAACAAGAATTGTACGATATG TGGTTCAAAATGTACAGGCGATCGAGGGAAACTAGGTTTGTCTGCCCTCT TTTTAAATGGTCATTAATCAAAGTAGCCTTGAAATTTAATCACATTGAAC TCGGTCACAAAGCAAACAGTTTtcaatgaaagttgaaattaTGGTGTGAA GAATAGAAGGTGACTTGTAATGTTAATTAAGAATTCAATCTAAAGTCTGT CAAAgcgaagaattgaaaaatatctgaaatattCATGCTTGATCTTTCTA AATGGAGGGTGCATATTTCTATAGATTCATAAAATATGCGTTTGATTGTA TTTCATTCAGCATGTTTAATTATCCCTTTCAACTTAATTTACTAACCAAA ACCattttttcttagaaaattcgATTCATCTGGTTTTGAACACGTGTTTG TCGGAGAGACCAGGGGCGATAAAGAAGTCATCGGATTCCACAACTGGATT CAATTCTACTTACAAGAGAAAGCTAAGAATGTTGATTACAAAGGATTCAT GGCTAGTGACAGGGTTGgtaacattttctttttctttaaaggaATAATGA GATGGTCTGAGATTTTAAGGGTACCACTGGTCTTATACATGAGAAAACGT GATTCCCGAGTAGTTTTGTCAACTGACAAGTCTGTGTCAAGATATTCCAc tttaaaatttcgaattcTGAGCTCTTTCCAACGTGAGAGGTCCGCGAGAG GTcccactgtttttttttaagttccTGAAAAGTCCGTCTGACTTGTCGAA GGTGAGTTATATCTCAGGGGGTCTTGTAGAATTATCTCAACGATAATCGA CGATTTATATTGTACATTCTTGACTCAAAATAGGAATTTTCATGGTTTTA TGCTCACATcataaaagtgtaaaaaagtataaaagtgTTACCCATTAAGA TAAATAATTTACAAATGCTTTGCAGGACTTTACACTCTAAACCCCCTGAC CGAAAGGTTTTCTTCGGAACCGTTTAAACGGCGATAATACTAAAAAATCG CTCCTCAACGATCTGCATAAACAAATGAACGAATGTGAAAGCAAATGCCT CTCGGAATTTTGTGAGTTTGTAAGCCAACTCGGTTTACAATAACAAACTG GAAAGCGCGATGCGAGATCCATAAAAAGACATGGCGACtgctttttgaaa tctttttttttaaccaaGAATTTGAGTTGGAGATTAAGAAACATTATTAA AGTTTTGGGTAAGGAAAAATGCAGTCTGTTTTTCCTTTTAGTTTCAGTAG TGAAATATCTCAATCTTGGCAACCAACTGATTATCCATTTAAGAATTAAA AGTCATTATTATCGTCAATAATTGGGCTTTCTTTTCCGTGTTTTTCCAAG TATAAATTCTTCAATCATCATTAATACCATTTATTGAGCGTAAAACTCGA TCTTAGGAAGTCGAAATCTGTAATATAtaaactatttaaaaaaatcaaga tttattCCATCATTTCTTATCAACTTGCCGTAAATCtatctttctttttc attcaacagAACCCTCACTTATTGACAGTCCAATTCTCATGGAAAGGCGA AGTCAAACCAAAAGGCGGTATCTTCATCGGTGTCTCACCTGAATTTGAGC TAGCTCTTTACACAGTCTGCTATATGTTAGGTGAGCACTCTTATAAGATC ACATTGGGCGGAGAAGAGGTGATCATCAAGTGCCATCAGACTGCAGGTAA GATCGGTACTTGTTACCCACAGTTACCCCGATGGCAGGGAAGAAGAAAGT AAAAAGTCGTTCACGTGAACATTTCAAAACGATCCTGAAAACGCTTGCGA AAGATTTTACAGTATGAATCCATGGTATTTTATTCATCGTTTTATATGTT TTTAGTCGCGCCTTTCAGGTAGTTCATTTCAATTAAAGTGTGTGGTGAGG GCTAGAGGGAATGCGAACATGAAGTGGATTTTGATTAgaatttttcaatt aattttagTGGCATAATTTTTGCCTTttagttgtttatttttttaacttt tttatttttattttcgtattATGGCTTTTTCGTACATGTCCACTTGCTTT TTTTAATCTCTTTTTGTAATACATCTTTCTTTATTCTCaagattattttt caatttatatttttgatgggagaaatttacaatttacacATTCATGAACT TTTCGTATccaatttgtattttattattaGTCACGATggaataaatgaat aaataaattttattttcaaaaataa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056147TCONS_00056147Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056147-proteinTCONS_00056147-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_268supercontigscaffold_268:94536..102210 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
90.3 95.45 283.88 332.04 349.43 285.21 344.72 346.31 262.46 315.11 193.81 225.83 162.14 167.19 248.4 273.99 220.73 190.93 115.83 135.4 97.99 96.99 139.83 131.75 46.12 51.09 151.61 104.81 158.76 125.87