XLOC_034631 (gene) - C. hemisphaerica

Overview
NameXLOC_034631
Unique NameXLOC_034631
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_247:330200..341302+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034631 ID=XLOC_034631|Name=XLOC_034631|organism=Clytia hemisphaerica|type=gene|length=11103bp|location=Sequence derived from alignment at scaffold_247:330200..341302+ (Clytia hemisphaerica)
gaaacgctttctcgtgtctccaccccatttttcattcaataacatttgtg cttctctcacttttgtcccagggacaaaatcagcgtgtcttttgggtatt tccctcactttttgttccataaaacaaaaaaagaaaccatgggacacgca ctttttttcttgtgttggtgggatggagcatgttgcgttgtaccaacgca aaaaaaacttctcgtgtccccaagtcTTTAAGGTAAAAACACGATTCTTT TACACTTGGGTAAGAATAACCTTCTCGGATTTTTGCATGACCTTGCTTTA GGGCGTGTCTTGatactgtttctttattttagaGCTTTTGTACTGTTTGA TTAACTGGACATAAATGTGTGGTAATTAAATCAAAGGCTTTTTACAAATT ATTTATAATTACGGAAATACTAATTTGCCAATGTAACGCGATTTAATCTA AGCGAATAATTCCTGCGATGACTTTACAGTATGTCCAATGATGTAAATAT CACTACACCCGTTTCCATCCATTTTTTTCGTGCCGATTTTTTGTCGCTGA TCGCCGAGAAAAGTCTGAGAAAAGTTTAACCGAAGGTAATGTTTATTTAG AAGCTTGTTAAATCTATACGTAAGCATGTTTGTAATTTAATATTGGATTT ACGAGAGATAGTGTTTTATTTCACAATACGATCCTTCGTGGCCATGTTTG TGATTTGTATTGGCAGCTTCTTAAAAACTGTCCTCTTAACTCGGCGTACT TTTTCACCAAGAAACTGAGTGAATTATTCTTATAACGTTGATGTTATTAT TTCCCTCTGTTTTCGTGTAAAGGATAATGGTATATGTATCATCAGGCTTT GTTGTCATAGCAACATTAAATTGATATCAGATGATTTGTTAATAACCTTA TAATTTGTCTTATTTGTTCTAGTTGTTTAATTCATTGCATACACTCATCA TCACACATGCTTGCTTCCACCCTCCCTCATCGTCAGCACAAAAAGCGCCT GACGTCGAAACAAGACAGAGTCGGAATTTCCCAtaagaagaataaaaaag ttcGAATTTCAAGCCAACAACGACAGGGTAAGCAAGCTTTCAATTTTCTT CGCTTTGTAGTTTAACATGCTTGAATGACTAAAgttgagagagagagagg acACTGAAAGATTTAACTAACATTACCCCGTAACagttatcgtattatca taacACCTTTATTACTGTATTATACGTACCACTTGTATGACTATTTACCA TAATCATTTTAACGTCTAGTGCCGTATActcgtttttataagaaactcaT TTAATCATTCTAAATTNTTAActtaagaataccgtaagaatatttttgga cgattttcgccaaaaagttaagaatacccATGATGAAATgcaaaaacacc attcttatagaaaaaagaaGCGTGTAACCAGTACAGTGTACCATCTTCTT AGACTTTTCACATCGAGGTCACAGAACGTGTTTCATCTTTCAATAAACAA GNAATGATAAGAATAAAACATAGATCTTGGCCATTtcgtatttgagaaaa aaatgaacagaGAGACAGAATTTACACTCTAACAATACTATGGCTGTTGT CTTAAACTTTCTCTCCTGTCAGAAAATCCACacccttttcaataaaataa cgAGCACTTTATGAAAAGGGTCTTAAAAGCATTCTAacctataaaaaaaa ttagtgcATATATTACTAAATAATATGCTATTATAAGATCCTAATCCAGT AATACAAATTTTTGACACCTCTTtttcagtgacccggtgaggATTATTTG CCAGTGATGATAGATAAAATAGGAATTTACATGCTGGTTGGGACACTATA CAATCCTTTTTTggatggctggggatttcaaagttttattaTTGTGTATT TCCCGGTGGGAAGGGGAGGTTACTGTAGTTTTCCAATAGGAATGGGGTTT CAGGGCACCTTTCCATCGGAAACGGTTTTTGGTCATTTGGGCGGGGTTCC TTTCGGTTTTGAGACAGTGGATATATTTTCAACCCTAAGAATTAAGCAAA TATCATTATAAGGAAAAGAggatttctaataaaaaaggaCGGTGACTAAA AAGTCATCTCACATTCTGATCACTCTAACATTTCAGGCGCTCAAATCTCA TTCTGGTGGTATAGAGCTGTTGTTTATTTAGAATCGACTTTATTAGACTA TTAAAATTGTAtccaaaaacctttttttatttaatcatATAAGTTGGAGT CGTTGGACAACcagaaaatcgataaaaatacCTTGGAGggtaatacaatt tttttataagagcatccaaaatttttgaagtctacggatgttcttaactt ttttagttttaagtctaaaaatgttcttaacatgttcttattttgaccat tttttaagtatttttgaccattttcctaagaaaaagggtgtttttgagtc cacaaagccttaaaatgttcttaacttgttcttaacattttagccattGA AGCCTATGTTCTTATATAGTTTGTTCTTATGCTTCGATGGCCAAAATGTT AAGAACAAGTTAAGAACGTTTTAAGGTCTAACGTCTTTACAGACTCTTTC TTAAGAAAATGGATAAAAATGCTCACGAAATGGTGAAAATAAGAACATGT TAAGAATATTTTTAGGCTTAAAGCTCAAAAAGTTAAGAACATCCTAAGGC TTCAAAAAGTTTGGATGTTCTTAACGTGTACACGCTTTTTTTTTATAAGA ATACACTTTATAAGAATGTCCATGATGAAAATGGCCAAAAAATTAAGAAT ATAGTAAGAATATCACCATCATAGAATTTAGCCACTGAACCTAAGAATGC CATTTTAAATGCATTTTAACCTGTAGATTGCCAATTTCGATCTTAACTTA AGAATACCGTAAGAATATTTTTGGACGATTTTCGCCCATGATGAAATGCA AAAACACCATTCTTATAAAAAAAAAAGCGTGTAACCAGTACAGTGTACCA TCTTCTTAGACTTTTCACATCGAGGTCACAAAACGTGTTTCATCTTTCAA TAAACAACCTTCAATTTTTCACGAGCTTCTGATTTACGATATGGTTGCTG TTATTTCACATTTTTTTAATCTCGACAACAATAAGGTTTATTCAATCGTT CTTTTATGACGAAACAAGATAGCAGACCTCTATGTTTTAAGAGCAGACCG AAAGAAAGAGGGAGACCTCTCAGAAATGAGGAAGGCAGACAAGCTAGGCA GGAGGAGCTCTCACTCTCAGTTACTCTAGTTAAGTAGGAAACAGGGGTGG ATACGACAGGCTCCTTCTaagagatttttctttttctttagagCAACTAA ATCAAGATGGCAGCCAGTAGGAATACAGCAGCAGCCAACACGACAGAGAG TTCAGTTGACCCTGATTCCACTGCAGAAACGTCTCGAGGTATCTCTTCAT CCACCCTGGGGTCATCTACTTCACAAGACAACTCTTCCATGGCAAGATCA ACCTCCACATCTGCACCCTTCAAACGCTCGAAACCTCCAGCCAAAACTGC CGGCAAGAAGAAAGTTTCAACTGCTGTTAAAAGGTAAGGGGTTTCCCCCT ACTGACCCTACATTTTCTTTATGGGATGTTTTAAGTTGGCTTCTTTCTCT ACTTGGAATATTATAACTAAGGGTTTGGCATAGGAGAGAAATCTTTTTGG GTTGGGGTCGCTTAAATGAAAATAGATTATTGgaattaaagaaagttgag gtattatataaatttcataaactaattatttcatctattttcAGTTCGTA ACGTTATAGTTTTCATTAAGTGAAATTTAGTGCTTTAGACTTTGTTACGA TTTTCAAAATTGCGATTCTTTTAAAAGAGTATATTGTATTTGAATACTTT ACACCagcacccctgtatcagtgacctGTTGGATTTCTAAGTCTTCTTTT AATTGGACAGAATTTANCAATCGTTCTTTTATGACGAAACAAGATAGCAG ACCTCTATGTTTTAAGAGCAGACCGAAAGAAAGAGGGAGACCTCTCAGAA ATGAGGAAGGCAGACAAGCTAGGCAGGAGGAGCTCTCACTCTCAGTTACT CTAGTTAAGTAGGAAACAGGGGTGGATACGACAGGCTCCTTCTaagagat ttttctttttctttagagCAACTAAATCAAGATGGCAGCCAGTAGGAATA CAGCAGCAGCCAACACGACAGAGAGTTCAGTTGACCCTGATTCCACTGCA GAAACGTCTCGAGGTATCTCTTCATCCACCCTGGGGTCATCTACTTCACA AGACAACTCTTCCATGGCAAGATCAACCTCCACATCTGCACCCTTCAAAC GCTCGAAACCTCCAGCCAAAACTGCCGGCAAGAAGAAAGTTTCAACTGCT GTTAAAAGGTAAGGGGTTTCCCCCTACTGACCCTACATTTTCTTTATGGG ATGTTTTAAGTTGGCTTCTTTCTCTACTTGGAATATTATAACTAAGGGTT TGGCATAGGAGAGAAATCTTTTTGGGTTGGGGTCGCTTAAATGAAAATAG ATTATTGgaattaaagaaagttgaggtattatataaatttcataaactaa ttatttcatctattttcAGTTCGTAACGTTATAGTTTTCATTAAGTGAAA TTTAGTGCTTTAGACTTTGTTACGATTTTCAAAATTGCGATTCTTTTAAA AGAGTATATTGTATTTGAATACTTTACACCagcacccctgtatcagtgac ctGTTGAATTTCTAAGTCTTCTTTTAATTGGACAGAATTTAAGATTTTCT CGTTCACAGATAAAAACCCAGTGAGTAATTCATAAATTTTCTTGTAGCTG CTCTTTTGCGAACCAAAaaagcattttcaaagtttaagaAAATTTCAGGG GATTCGCTTCTCAAGCTAAATGATTTTTAGCCGATTTTTCCATTTGTGGG GGCCCCACCGGTTCTCTGTGATACAGGGATGCATTACAGTGCTAGGGAAA TAAGTTTTGTTCAAAGGTAACCTTTTTAAAGGAAGGAGTCCTTGATATAA AACTGtcaagataaaaatatttagttttacttctttgtttctattttttc ttttttatagaaaattattCCCCCTTTTTTCACTTCAACATGAATGAGAA ACGCCCTTCCTCTCTTCAACCCCCCTCCCTAGAGcagagaaactttttct ttgaaaatctcTAAAATTGAAAGCAAGATTTCCTGGTAAGAAATTTTCAG TACATGAGGCGGACAAAGACAATATCTGCCATTTTGTTCTCAGACGAAAA AATGTCGTAAACCCGGGGCAATTAGATATTGAGATTATTATTTGTTTTCG AAACCCGAGGTTAGTTTTGCAGCTGCGAATCATTTTTCCCTTCTAGAAAT TTCTCTTCTAACTTTCGTTGCATTAGCTTTTTGCATTTAATCACACAAAA TCATTAGACAACTTGCCAGGTGAAactaatttttgataaatttcttcACC TTTCATCAAAATAAAGTTCATAAAAACATGGCTTTCTAAAAAAAATCCGA CATTCGACTatcaacactttttttaatgtttttatgtgACGTCATTCATT TACTTAACAACCGCTGAccgttttttataatttttcacaTTGATATTATA AGAACTAACCCTTGGATATCTTATAAGCCAGTTGAAGACTTACATATCCA TTATATAATGTCTTAGTTTTCGGCTGCATTgtcacatacacgttttttat aaaaaatgaaaaacttttgaggcctttgaatgttcttaatttttaaaacc taaaaatgttcttaaaatgttcttattttcaccattttgtgagtaatttt ATCTATTTTCCTGAGAAGttcggtgttttagagtccacaaagttCGAAGC TTTATAGTTTGttcatataaaattaaaaaaacatgtaagatGTAAGATTC TTTTAAACTTCCATTACTAGTTATAATGAccttgttttaattttcttgcC AGATTTCAGATTCTTTCCCTAGCATTGCGAATCTCGTTTTCCTAATGGAA ATAAAACTATTCCTATGGGAGAAAAGAGCGCTGACcagggggcatagccc cccccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNcaccccccccccccccaatatgaaaatgc ttcctacggcactgctgACTCAATAAAGATAAACTGTTACacgcttttct ttttttataagaatggtgtaaatccatttcatcatggatattgttaactt ttttgggaaaatcatcctagaatattcttacaccattcttaagttaggat cctaattcagactagattaaacatttagtacatacgtctcaagcataaaa tggcatttttgtgaaaggggtGAGCCTTAGCTACTTgagggtaattgaca atttataattaattgaaaatgctctaaaaatggcattcttagcttgaatA GCAAAATTTCTTGCTGGacatattcttagcatattcttaattttttggcc attttcatcatggacattcttataaagtgtattcttattaaaaaaagcgt gtagtctgaatcacagactCTTCGCAGACCTCTTTAGAAATACTTGCCAT AATAAGAAAGTGTTTTCGCTAAAGGATGAACAGAGGCCTAAATAACTGCG TGCTATTTATTGTGTTAAACCCTAGTGGTTGTGTACCCCTAGAAATGGAA GCGTCCTACTGGTTGAAAAGTATATCACATGAACTTTCATGGGAAAGTGT TCATGCGACTTTATCAGCTAAAAGCGACATATGGGCTGTTctagaaaaaa tccgttcatgggggatggaggatgaattgtccaggggtattgaaaaaata ccaaagaattgcaatgtccagggggtaaattccaatgtccaggggtaatt ttttgtgtccacggggttgatttgatgtttgtccaggggtataacccgtg tccagggggttaaaaatccaaatgtcccggggtaattcatgaaaaaaata atatatcctccaccccccatgaacggattttttctggaagagcccattgt tcTACTGGTAATATATGGAaggcgttttgaattttttcctaACACTTTGA GCCACGAtgttttcaaaaaccttttgttctccaacTTATACCGTTTATGT ATTTTGATCACCCTCCTACTTATACATTGCCTTGGTCTAATTGGTGAGAA AGTTTTTAGTTCTTatatttcaatgattttgtGTGTTTAGCTGTGAGTTA CAGTGTTCTTTTCTTCAGATATTCTCCGCCAACCCCTCCGCCCAAATGCC ACCCTCTGCATGATTGTCTTCAATGTGATGAATGTAGAGCAAATGTGCTT TTTCTTAGCTTTGAACAATGTAACTGACTGATTTCGGTATCTGTTTCATG TTTGTATGCCTACAAAGCCTATTGCCTGAAAAGTTGATTTATACCATTCT GCATTCATGCATGACCCGCGCCATGATCTCCAAATTAAAAGGGCCAATGT ACTTGATTTTGGTTTGCGGCAAATGGAGAAATTCCGATTTCGCATCCATA AGATGCATCCAAATAACCCTATTTGTGGAGAATGAGTTTATTTTCGAACT CTGTATATCATGTTATTtaaatgcttttctttttttgcaagaaaGTGGTA GCGGACCTTCGATTAAAAGAAAGGTATGGGACAGGCAATAGTGAGGGCGT AGTAAAAATAAGTAGCAAGAAGTTTTGTGTTTAATTTGTGGCCAGACACA AGAACGATGACGTACAATGCGACAACTTCAACTTTATCACGAGCTTCTGA ATTCGGGCAATGAATAAATCATGAAATGTGCTGTTATGTTATCATTTTTT ATtaacactcttttttataagaatttactttCAGACCGCTTTATATTATC CCTTCTGTGTTTGTTACTTTCTATTACATATTGGGCTTCTTTTGTATGTT TTAAAGTTCCTACAGTTCCAAACTAGCTCAGAAGCCTGGGTGCAAATATC TTGCACGAACGTCAAACTTTCTCTGGTCATTTTGTAAACCAAATATATTC TTAGCTCAAAAGTAGAGTATGTCGTTCTGACATCTGAGAGGATTATTTCT CCTCACAAAAAAACCGCTGACCGGTTCCCAATGAAACCATacataatgaa atgaaaatcgtCAGATAAAATAATGGATGTCTAATTATTTATGAAAATCA AGCATACTTAAATACATTAAATAAACAAATTACATTCTGTTCTGGACTTC CCTAACTTTGTAATGTGTTACCGAACCCTGTTGTCTCCCTGTTGCCAGCA CTGGAATAGGGGTGGTAAGTGTTCAGGGTCAGGGGGCCTTAGGGTCTTAG ACTTTGGGGCTGGTCGTATAATGTAGGCAGACACTAATTTATGATAATAT TTTAGCTAATTAACTTGAATTGCCTGGGATATGAAGCTTAAAGACATTAA ACACAAAAGAGAGAGTTTAAGACTTTTTTGTTAGAACCAGTATATGTTTG ACGAGActcagctgttcttattttttaggaCAAAACCGAGGTATTTCCGG TTTGATATTTTTACTAATTGACTCTTAATTTGCTTAACAACTTTAGGCTA atgattgttcttaaattgttcttatgaaattattCTTAGAAAAGAAAGAA TGCATTTTGAAAACCCTGGAATAACtgtatcaaaaattatttcttttttt tatttcagaattcAACGTGAATTGACAGACATTACTCTCGACCCTCCGCC TAATTGCAGGTACGTAATCATCATTATCTCCCTATAATTATCTCCCTTGA CTTCAAACGCATTCCGCATTTAGAAATACTTAATTATTTGCCATATTTTG GTGGTTTTCTTCTGATACAAACGTTTTTATAACCTGTTTATAACTACACC CTGGTCTCGCTGAATTTAGTAAAGGTTTGATATATATGATGTTAATTTAC TGCATATCATGACTTAAACTACTGAAAGTAAAATACGAAAACAcatactt tttaattttgaaccACGTTTGTTTCAGTGCTGGACCAAAAGGCGACAACT TGTATGATTGGGTGGGTACCATCCTCGGACCACAAGGAACCGTCTATCAA GGAGGCGTGTTCTTCCTGGAGATTACTTTCCCTTCAGACTATCCCTTTAA ACCGCCCAAAGTGATCTTCAGAACGCGCATTTATCACTGCAACATCAACT CGCAGGTAAGGACTGTCTTTCACTCTTTCCCTCCCTGTTGAAGGTGGCTG GAGGGTGTGTACCCAGGATCCGTGCTCGAATTTGGGCTATTTGTATCTCT CCAATTTTAATTTGGTTTTTTATTTGTGTTTCGTAAATATTTGTTGATAC ttcttttttaataaatcaGATTCCTCCCATAGGGTGGTAGTGTTAGTGGC ACAGTAGATTGCATAGTAGCTTGCTTCAAATCTCTTCTCAAAAAGAAGTT TCATAATAATTGTGGTCAATTCGCAATTCTGTTTTTGGTTAACAAGAAAT AGTTTTATACCTCTCCGAAAGCcgctattttttcaagaaatttggTAGTT TAAGTTAGCGTGGAATGTGCTAAACCACTTTCAATTGAGCTAAGATCTGA TAATGTCTGTCTGGGCTTACACTTAGGCTTCTCTCGATaaaaatactgaa gttgagcccagtgcagTGCGCACTTTTGACTATTCACTAAAGTCCGCTAC ATTTCCGTCCGTAGTTGGCCACTAAATTGTATCTTTCCTTTTCTTAGGGT CAAATATGTTTGGACATCTTGAAAGACAATTGGAGTCCGGCATTCACCGT CTCCAAAGTACTTCTCTCGGTGACGGCACTTTTGACCGATTGTAACCCAG GTAacaaacaaattttcaaattgactAATTTACTTTTCTTAATATCTGAA TTCTTCATACAACTTACCACTACCTACGAGTCGCCATTGAGAGTTCTCGC CACTCTCGAAACTGTATAACTAAAAAACGCCTacaattttattcaaattt gtcaGGTTTTACTATTGTACTTTAAGGgatgaaaatatgaaatctaAAAA TCTTGGGTAAAAACGAATGTAATGGCAATTAATCAACGAAAAGAAGTTTT GTCTCGTGAAATGTCAAAAGTAGTTTCCTTTCTAAAGTACGCtgcttctt caaatttttaaaaatacgagacgaattttcatttttcagctgATCCATTG GTTGGAAACATCGCACAACAATTTCTTTCAAACCGTGAAGAGCACGACAC GATCGCCCGTGAGTGGACCCGAAGATACGCTACCTAAATGCTTCCCAGCA AAATCTGTTTCTCAAATCATGTAAATATCTCTGTTAAACAGAAAGTGATG GAGTCGAGTTGGAAAGGGAGAGAAGCTTAACTGCTGTGAAGTGATGTTAT CCAATAAGAGTTGTTTGAACTGACGAGGATGTGTTCTGGAAGGTTCAGCT TAGATGACGATAATGATGTTGTTTTCTCTCGACTCTGGCGGTAAATGAAT TGACATCAATGTAAGTGTTAATGACAGTCACCAAGCTCCTACAAAGCaaa gattgaaaaagaattgaGAGTATCAGTCGAAATATGAACAAACACTCATT AAAAACTTGATCGCAGTTTATAGAAGTATGCATGCACGCTTTTCGCTTTC TACTCGGGGAAgatatgtttcaattttcatgccTTCCGGCTGAGTGGAAT ACCATCACTTGTACCATCACAGTTGAagtaatttcaagaattttaatcct aattgcccccgcaaggagcgcagcgactgaggaggcattcatagcttcac gcaatatattgaactggaatctcgattttttgcgaattgtttttgttttt gNN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054953TCONS_00054953Clytia hemisphaericatranscript
TCONS_00054954TCONS_00054954Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054953-proteinTCONS_00054953-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_247supercontigscaffold_247:330200..341302 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
UBE2E2PREDICTED: ubiquitin-conjugating enzyme E2 E2 isoform X1 Homo Sapiens
UBE2E3ubiquitin-conjugating enzyme E2 E3 Homo Sapiens
UBE2E1ubiquitin-conjugating enzyme E2 E1 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.72 3.93 5.52 6.05 45.36 39.42 36.71 38.57 19.97 23.6 12.41 12.83 23.15 24.15 41.14 39.06 34.93 43.98 34.76 40.02 26.38 26.02 20.48 23.05 17.2 17.11 22.88 24.03 12.44 16.82