XLOC_034047 (gene) - C. hemisphaerica

Overview
NameXLOC_034047
Unique NameXLOC_034047
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_237:221569..229954+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034047 ID=XLOC_034047|Name=XLOC_034047|organism=Clytia hemisphaerica|type=gene|length=8386bp|location=Sequence derived from alignment at scaffold_237:221569..229954+ (Clytia hemisphaerica)
GGGGGGACGAGGTAGGTTGGGTCTTCTTTGTCAAAATCGTATCTgtatct ttgcggctcttgttgcTTTGtcgcactttcgttttcaatttCTAAGAATT TTAGGAATAATGCTATTTTCCAGAACAAAAAGCGCCCATTGAATCTTCAA ATTATCGTTGTTCCGTAATATACGAATCAaaaccaaaacattcgaaactt caaaacaaaaacaaagattgCAGAATTTCTTGCACTGATCAACTCAACTG ACTGTCGCCTCTCGttcagaaagaaaaattaatataCCAGTCCAGTCAGT ACTCCACGCACAAGATGGGTTTAATTGCATCATCAATGAAAGAAACTATG GAGGATAATCTCAAAAAGCAGCAAGATTTCATGCTACAAACACAACAAAT GCAGGTATTAATGATGTCAAAATTTACAGATTTCGCGGTATTTTATATGA TTTTAacacctgtgacctgttgacctgtgacctgtgtttcgAACTGGACA TTTTATTCCTAACCCTAAAGAAGGTGAGGCCGAATGCCTTCTTTATAGCA CTTAGGGGCACCCGTACCCTGAGACCTAACTTAggcagcctagactaatg ttaatttttctttcagaaaaaagactataaataaattgtttacctttatt cctgcagcttcccaacatccaagctctcgaACAtaacaagccgaatgaaa ttactttcaatttcccgtagaaattatgcgatgaaaaatccgggggtcga agaatgaagatatttttatttccgaacaagttatctttgcttatagcgaa atattacttttcaatatatttgctgaatataatgtttgattacaaaaata ctttacactgtatttaaagtttgaaaaagtcgattctactaTTCTANNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctttaa tataatgccaattatgcatgtaagtttttaattcatactttctttttgca tatgttttgcatactttctaagggaatttcaccacggcaattcgaccacc ataatttttgcatacaattcaatatggcggatggaaaggcgaaaaggtct atcccgagatttttgcagtcgggcgttcaaaacaaaagcgtttttatttt tccgcccacttacgaatttttctttataataggcatttaaaatatcGAAT TTAAAAATAGtagtataaaaccttattttttaccgtatagtatttcttct aaaacaaaaaaacaaaatacactagaaaaataaagaattNtaggatcccg tagggatctTTGTAGGGCACCGGTACCGGTGGTAGGGTTGGGAGCCTTCT TAATTAAtgaaggtctgtaaattacacgctataagtatttgtgaatgaca gctgTCTTCTGTCTCTTGTTGGCGCAAGCAGTTAGGCATTGGGTTCAAGC CTGGGTCGGAGACCagcagccagaatatcaaccaacctaaattttgtcat tcaattcttgagactttgattttgaaggccttgtttatacgctaaagtaa aaatgatTCCACACATGTAAATGGAttaggccgatgaaatttacatatga gtttaccgttgtgaacttacccaaaaatagatgcggcatgatttcattat tcattattcattattttcccaacNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNttattcattattttcccaacagcaccttatcc accatttctgccaatcatgctctctcaaaataaaaaattttgcttcgctt caacccttcgcatcttttgcgaatgaaaaataaagatcgattgctacagt ggcgctagattttgcaaaaaactaaaatggcggtCAGGGCGGTTTGGCAG ATATATGGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNTAAACATGcgtagagacgattttaacaaagataga ggttgtagttgtaaagaaatatggaaataatgaaaaatttatgaattttg aaaataatgaaattttcacgtgggtgctttttagagatgtgggcggccga cggtaaactcatatataaatttcatcggccttagtgtttgaggtccagca aaatttctgggaaatagcctatccggcggtgcacGGTTCTGTCTCCCCCt cagatctttttcttgggaagttgatcttcaaattagtttttaagGTTGGC TTGCTaggctcaaatttttttatctatggctcaaattttaggcaatttct catagttttcgAAAATATTCCACCCGTCGCGCGTCGGGGAGAGAGCGCAG ATCTGAAAagccgaagggctagataggcaactcaAAGCTTTctcgagcaa aaaaaattgactttttaaatttcgtgccgatggataggatctagcatttt aattgttttcagtgCGCAAGATCAAAagagtaggcggcaaacgctatttc acatctttCAAATTGGTGAAATTGCATGATTTTAGTCAAGTGTCTAGCCC CCATCAGGGGCTTTACAGGTCTGTGGAAGAGAAATGGAATGTCGCCCTTT GAAGTACAGCTATTAGTGAGGTAGATAACTcaggacgacggacgaaaaat gtaataggctagtgaaaatacgaaatctgattggttgaaatattCTGATT GATTATTCTAGCTTTTCTAGCTTTAATTAAATTCagaaaatagcacaata tttccaaaatgtttacaattattttaaaaataaaaggtCTGTAATTTACT CAGTAAAGTTTCCCGCGTTTGCAGTTTCCCGCGTTTTAGCATTTTCCCGC CACTGAGTTTCCCGCGTGTTCGTCAGCGCCCTCTGCGCCCATGGGCGGAA CGGACCACCTTGGTCGTTCTGGGTTGTTCCGGGTCGTTCTGGGTCGTTCC GGGTCGTTCCGGGTCATTCTGGGTTGCTCTGGCACGTTACGGGTCATTAC TACTAGTTCCTACTTATACAAACGACCTGGTCAAATTTACTCTTGGAAGT GTACAAAAAACATTCCTAAgtcatatttacaaaaaaatatgtcaaaactg tTTCCTTTTAGTCCATTAACTTCAGTTTGGTAAAAGAATACAAAcacaaa agtaaataaaaatagactTTATGACATCATGATTTCATTCAACTTGGAAT AAATCCTCAATAtcaaaaataaggctaaaaagTACACactttatcaacat tttactcattttcttgACGATGTTACTTTTCTTGTTTAATATGTTTTCTG TAATGGACAGGGACCGCTAAACAATTTACAATGTTAAAAAAAGAACCTTG CACCTAAAAATGGTCATTGGAAATTCAGTACACACAGTGaactttttatt gtatttcttGCTTTGGCGTTCGTTTTTTTTTCGGGGGAAAaagcaataga cgatatcggctttccgaattctccccaaatgattacccatgatgcattgt gcaaaaaattcacggaaagtcaatatcatccgtgaattttttgcacaatg catcatgggtaatcattcggggagaattcggaaagccaatatcgtctatt gtttttttcccaaaaaaaaaacgaacgCCAAAGCaagaaaagtttgtttt gatttaagtttgtattttaatgaccatccaggtcattcatttgagggcta tgcaagtttccctccactggtGCAATTTACCCGATTTCACGGTACAGATT TGATAAAGTAGATAAGTCTTATTATGAGAAGCAGATAAAATTCAGGGCAC CGTGGTGCCTTTATGCCGTAGATTCGTTAGCTGAGATGAATGCTGATGCT GAGATGATTTCAATTTTCTATTATTCTTTTCAAAGCTTTTTCTAGACACT AATCAGGGCAAAATAATTAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNactaaaatgtaagacatacatgagtactaaaaggattttcgctaattt ttgacatacccccacctatttttcgaaaatgttattttagtacacatgta ctaaagttattttgagcaatttaacatagacaccacccattttttgccct tttacggctttaaatttaccaaaatggggtcattgttacaaacctagtcg aatttagtgcatcaatctgcaaaataatataagtttattactaaactgtg ctgaaattgtacataaaaatatttttaaaaaattggaaaaattctgaaag atttctgaagattttttcgaaaattcctgagaaaaaaaaatcaaattttt tccaaaattgttaaaaaaatgccccattttggctgattctggctgatttt agaacaaaatactaagatttttcaaaaatttctttaagggaccacccttt ttggtattttagtacacatggtactaaaattatttttgaNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCTGGGC ACCGTGGTGCCTTTATGCTGTAATTTCGTTAGCTGAGATGAATGCTGATG CTGAGATGATTTCAATTCTCTATTATTCTTTTCAAAGCTTTTTCTAGACA CTAATCAGGGCAAAATAATTAAGTTAAATTTCTCATGAAAATGGTTGAAG ACTGTTTGAAGAGAAAATAAATTATAACCCTGGTAAAAGATTTAAATGCT ACATAGAAAGGCGTCAGACATATGACTATTGGCAAATATTactattgtca aatattgttctCCAATATGCTGTTCTCTCCCTCGTACGGTTTAAGTAGAT CTTAAGTCTGGAGTTTCTGAACCTTTAGGAAGTTTCTAAGTTCAACTGAG TCATTTCTAGAGTTGACATTTTTATATGTGAAATTTGATGAGTCCCGAGT GGGATTTGAACCCATACATGAAAAGTAACCTCGATTCAGAAACTCCGTAC GCTACAATTACTCCACGAGGCCACGGCAATCAATTGAATTCACAAGCTAC ttataatgtgtatttcaaagACCCATATATATTATCCTGTTGGCCCCCAT CCTACCGGTCCTACCAGGGCCCTTTGTTTCCCTACAAATGCCACTGTCCC AACCCTATTAGgactcgagctccaaccctgaccctattTGATCCTGACTG ATAAAAAACGAATTTCACCTGTATGGATTGAAAAATTGATCTGGAAAATT TGTTCTCTCGTTTGTGTTTGTTGCAAAGATTTGGAATAAGTGTGTATAGC TGCTATATAAGTCTCGATCAGAAATCCTATCTTTCCTATTTTATCTATCT TTGATAAATGGTTTACAAGGTTTAGTTTTTAAAGAAGATGTGAgatatca tttgcttactcatcaatttttattcacaagctttatttcattggattgac acgtatgtgtagcaagattagtcagaaagagagaaaaacatttttttgct tatattagcataatataacaaaaggcagacactgcccttatatgaaatat gtgtctgatatgaaaagggaacacttatgtaaaactaaaatctttaaATG AACTAACGggttttttatcaaaactttccCCTTTTTTCCACAGCTTGGGA GACAAATTGCAATGCAACATATGATGGCCAAGAAACAAATGTCAATTCAA ATGGCTCGTCAACGAGAGATGTTCAATTGGATTGCAAGTTTCACTGGTAC TGTTTCGTTTTTTGCTGTTGTTGCGTAAgtagaagtaaaaaaaaataacc TTGTGCACTCACTTCAGTTCAACTAAAATGTCTGTCTGTACCCTAAAAAC TTTGTGGCAGACTGaggacttcaaaaatggtcagatttggctgagattta caaaaatttcaagaaGTTGCACCATAAGAGTcgatttttcgcccaaattt actcaaagtCGGATAAGTTTTCTCTTCACTGTATGGGTCCAATTTTGAGA CCCCATTTTTTAGCTCTCAGGCTAGTGTATCAGGCTATTCcaccagaaat agtctgtaccaatgaagtataagcccgaagggctagaagtcaatctcctt ggtaggatttgaagccaacaaatcctaccaaagttgcgcggccttgagcg gctcgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatcaatc gtaaacaaaggaattgctagattcaatctgtcgtcaaaaatgcggcgcat tttttaaggcttcactttttcttgcctgagaaaggttagagatagaactc tagcccttcgggctttaaactcaatggtctgtaccccctatgttgaggag ttGTGAAGTCCAGGGTGGTCTAGAGAATTAAAAAATCCATAGGGTctggt ttttgtttttttttgtcagtaaaatgaggctgaaaatccagggtggtcag taacaCAAGGTacagaaaatgggaaaaaaatctatgaggcctgaaaaatt gaaataagaaATTCCAGAAAAACCTTTCAGTAATAATCTAgctttgatat tttatttttattttttagagcAACAAAATCAAAGAATCCAAAATTATTAG CTCCCATTCTCCCGCTTGGATTCATCACCGCTTACCAATGGGATATGGCA CATGGCGACAAAATGCAAAGGATAAAACGTTAGTAAAAAAGTTCCATGTA AAGTCAAAAATACCCTCatgaaattgtttttcaatGTATTTAATCGATAG CCAATATCTCTTGTGTTTATTGTCTATCTATCtgtgtactcttaggttcc aaataaattcttgttaatttttcgaaaatttttcaaatccccGCCCGGAC CTGATTAGGactccccgtttattaattttaaggATATTTTCAGCAGTTGA AGAGAAGGTCCCATATTTtactctaaatagcctgattttagcctatattt accttatttttgggttttcagaagaaCAATTTccaacacccccccccccc ccaattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNccccccccccccggcaattaggattta ttaaaatttcgatgttcaaaaatgttctttattaaCAAAAACACCTAATG AATTACCAGCATTGCGATCTTTGtgattgatgatttttttttcaaattat cagAAAAATCTTTGTGCTTATTTGTCTCTTTGCTGGAATATTTgctaaaa gtcatattttttcTCATTAGGAGATGCTGAATTCATTCTTGACGAAACTG ATCGTACAGAACTACCTCATGGAGATCTTAACCTTCAATTGATCGACCAG TATCGAACGAAGAAGTAGATTCGAGTTGATTAACAATTATGTGGATTCAG ACAAATTAGACATTAAACCTTAGTACGGTTGCTTACCGAATCTTAACGTC ATTTCGGGGTAATTTTCATAGGTTTGGGGTAACTTTCATTTGGTGAAATT TTCTATGACTCAATTTCGGATAAACCCTatgaaaagtaataaaatcagtc atatgACTAACCAGGAATGATATGATATTTCGTGAAATTAGGATTAATAC CCCTCGTATCATTTTGAAACACTTTGAAATAGCCCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053930TCONS_00053930Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053930-proteinTCONS_00053930-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_237supercontigscaffold_237:221569..229954 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PLGRKTPREDICTED: plasminogen receptor (KT) isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
26.94 25.71 23.74 24.16 84.29 71.47 71.6 71.4 49.91 48.76 44.23 50.56 39.13 36.21 33.96 49.63 31.15 40.5 18.2 22.09 21.21 22.34 22.16 22.46 16.86 16.66 8.31 8.09 11.1 10.05