TCONS_00053930-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053930-protein
Unique NameTCONS_00053930-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length142

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053930-protein ID=TCONS_00053930-protein|Name=TCONS_00053930-protein|organism=Clytia hemisphaerica|type=polypeptide|length=142bp
MGLIASSMKETMEDNLKKQQDFMLQTQQMQLGRQIAMQHMMAKKQMSIQM
ARQREMFNWIASFTGTVSFFAVVAATKSKNPKLLAPILPLGFITAYQWDM
AHGDKMQRIKRDAEFILDETDRTELPHGDLNLQLIDQYRTKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034047XLOC_034047Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053930TCONS_00053930Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019319DUF2368
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019319Protein of unknown function DUF2368PFAMPF10166DUF2368coord: 7..135
e-value: 4.4E-44
score: 149.3

Blast
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BLAST of TCONS_00053930-protein vs. Swiss-Prot (Human)
Match: PLRKT (Plasminogen receptor (KT) OS=Homo sapiens GN=PLGRKT PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.320e-29
Identity = 52/140 (37.14%), Postives = 85/140 (60.71%), Query Frame = 0 
Query:    1 MGLIASSMKETMEDNLKKQQDFMLQTQQMQLGRQIAMQHMMAKKQMSIQMARQREMFNWIASFTGTVSFFAVVAATKSKNPKLLAPILPLGFITAYQWDMAHGDKMQRIKRDAEFILD-ETDRTELPHGDLNLQLIDQYR 139
            MG I S   ++M +++K Q++FML   ++QL RQ+ MQ  M ++QM++Q+A  RE   +  +F G  +      A K K P  L PI+PL FI  YQ+D+ +G  ++R+K +AE IL+ E  + +LP G +  + I++ R
Sbjct:    1 MGFIFS---KSMNESMKNQKEFMLMNARLQLERQLIMQSEMRERQMAMQIAWSREFLKYFGTFFGLAAISLTAGAIKKKKPAFLVPIVPLSFILTYQYDLGYGTLLERMKGEAEDILETEKSKLQLPRGMITFESIEKAR 137
The following BLAST results are available for this feature:
BLAST of TCONS_00053930-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PLRKT3.320e-2937.14Plasminogen receptor (KT) OS=Homo sapiens GN=PLGRK... [more]
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