XLOC_033987 (gene) - C. hemisphaerica

Overview
NameXLOC_033987
Unique NameXLOC_033987
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_234:516054..525349-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033987 ID=XLOC_033987|Name=XLOC_033987|organism=Clytia hemisphaerica|type=gene|length=9296bp|location=Sequence derived from alignment at scaffold_234:516054..525349- (Clytia hemisphaerica)
CTTTCCCTCCCTTCCCTCTGAAAAATATTAAACAATGAAGGCAACCATTT ATAAATATATGATAATGATTAAATTCTTTATTGAAAATAGATATAAAAAA TAAAAATGGGGGATGACAACAAAAGAAAACTCAACCTGGAAGATGAAATG AACAGGTATTCATGCCATGTGTGTTATAATTTGTGTAGTCTTTCTGGATA TCATGATCTTCTCACAACCCTTATTAAAAACTTTTATTCCCTTACAACAC TTTGAAATTTATCGATTTTGATGGTTAAGATAATGAAGGTTTCGGTTTTT GCAACGCAATGCTTTTCTGTTTCATCATTATGACGAACATGATAAATCCA TTATTACACCTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGATT GACACTTCCCCTCAAGGATTTTTGTTTTAATTTTCATAAATTGTGAATGT ACAGTCTGGTGGCTGATATTTTATGGTAGACTATATTTTTCCACTTTTAG CCACCAAAATGTACTTTTTTCAAAAAAAACTTACTTAGCCTATTTCTTGT TGTATTTACTATGTATTGGTAAAGTTTCGCATTTATATTGAAAATATTTT TAGAGTTATTGAGAAAAATGTGTTTTTGTTGATTTTTTGATACTTCACAC AATTTTTGACTGGCATCTTATCTAGGTTTGAGCAGGAGATTTCTGGCAAT CTCCCTCCTCCACCAAAAATGCCAAAGATGCCCAACATGATGGGTCCACC TGGCTTCATGGGCCGTCCTCCCATGCCCCCTCCACCATTCATGAACCAAA ACCGTAATGGTAGTGGAGGGCTGCCACCCATGTCATTCCCTCCTGGTCCC CCTCCTCAGATGCCACCAAATATGTTTGGGGGACCACCAGGTGGCCTACC ACCACCACCGGCAATGCGTGGTCTCCCTGTTCCTCCACCAATGATGGTCC CTCCTCCCATGATGCCAATGCCGATTCCTCCAATGGCGATGCCCTCATCT GCGCCAGGTAAATTTTAGTACCCTTTTTTTCAGCTACCCTTCCTTTCGGG ACAATTAAAACTATAATATAGTAGACCCCCAATCTAGTAGACTTTACATT ATAGTGAGCCTTTTCAGAAACTTATTCAATTGTCAAGGGTAGAGGGGAAA ACAAAATATCTGAATGACTCCAAATGAGAGTAAACATAATTGGATAACAT AAGAAAACCTCAACATCTTTCGTTAGATTGTATAGGTATCACATAGTTCA TGATTCAGAATAAATATATTTATTAGAAAACCACAGTTCTGCTGCCTTTT AAGGTGTGACGAAACATTCTGAATTTTGTTATAAAAATACTTGAAGGTTG AAGAACCTGCTGCCAACAATATTCCTATCATTAATTTTATAGGAAACAAT TTTGGTGGATCAGCGAACAATACATCAAGCAACGATAACATGTCATCATC TGTTTCAAATATCAACAATCCTACCGCTGACAATGTGGTAGGTGGACCCG GTGGGGGTGGTGGTGAAAAGAAGAAGAAAGATAAGAAGAAGACGGTTGTT CGTGTGGCAGGGAGCAGTGTTTGGGAAGATGATAGCCTTCTCGATTGGGA TCCTAGTAAGTCTTGAATTGTTTATAATTTTTTGAGACTACATTCTTTAA ATTAGGGCGTGGTTTCTACCTTAGAATAATAAAATTGTAGTATTATAAAA TATACTATCGACCCTTGCCATAGAAGCTGTTGGACCTGGTTTGACATACA TCCAATACTTCAACTCATTCATTTTACGGTGTTTAATTTGATCAGACAAA TTATATAGATCTATTAAAATCTCTGTGAATCCTCTGGAATACTACCAATT TTTTTAACCTCTATTTTTTTACGACTTTAAGAGGAAGGGACCACTTCTCA GCCTACAAGTTCATTGTTCTAAAATCCTTCTTCCATTTTCAGATGATTTC CGTATTTTTGTCGGCGATCTGGGCAACGAAGTAAGCGACGACCACCTTCT TCGGGCGTTCTCCAAGTACCCTTCCCTCAACAAATCACGCGTCGTTCGTG ATAAGAGATCGAAGAAGACCAAAGGTTATGGTTTCGTCAGCTTCAAAGAT CCTCAAGATTATTTGAAAGCAATGAGAGAAATGAACGGTCAGTAAAAAAT GGTCGAATTTTGAATACAATTGGATGTCTCCAAAACTCAAACACTGACGA AGAACTTAAATTTGTTNTTTAATAATATTGGATGTCTCCGAAACTCAAAC ACTGACGAAGAACTCAAATTTGTTCGAGTTATGAAGACTAGATTATAAGG CATTGTTAACTTAAGGGGCAAGAAAAATTGTTCGAATTAAGGTGACATTT GAGAGAGGTTCGAATTCTGGAGACTTCAGACGAGTTCATTGTAGGTTTTA TAAGAAAAGACCATGAATTTTTTTAAATTTCAACATGGTATAAAAGTCAG TTTTTTTCAAATAGCTTTCGAACTACTTTTTCAAATTTAATGTATGATAG CTCAAAATTCAAGTAAGATCATCCTCTATACCATAAAATAAGAATAAACT AAAAATTTAAATCTAGAAGTTCACAATATCTCGACAAACTTGTATACTTT TTTTTGGTGCACCCGATATAAAATTATGTTAACATTCGTACTTACTATAG CCGGGAAGGAGAGAAGTTGTTTTCATTTTTATGGAAATGCTGTATAAGCA GATAGGAGATACTCTTGGGTACCTAATAAACGGGGGGTTAGTGCGGGTGG AAAAATTCTCGAAATTTAATAAGCGGGGAGAGGGTTGGAATGAAAATATC CTGGAAAATTCCTTAAAAGGAGGCTAAAGGCTTGGGGACACGAGAAGTTT TTTTCGCGTCGGTGCAATGCAACATGCTCTTTCCCACCAACACAAGAAAA AAGGTGTCTACACGGTTTCTTTTTTGTTTCATTGGACAAAAAGTGAAGGA AATACCCTCAAAGAGAGTACTTTAATTTAAACGATGTCATTTTATAAAGA TTCCTAATAAATTCTCAATTTATTCACAGGTAAATACGTTGGTAACAGAC CAATCAAGTTACGCAAAAGTAATTGGAAAGATCGAAACATCATGACAGCA AAGAAGAAAGAAAAGGAAAAGAAGAAGCTTGGCTTACGGTGAAAGTTTGG GGATCTGCAAGTACACGTTGACCTGATTTGGCCGAGATTATTATTTTTTC CTCGATCGTAGCTTCGAGAAGAATACAATCGATTTTCACATCGTATTGTT GTTGAGATGAAATAGATTGAGATGACAGTTCCAGTTTTTTCCAATTCTAG TTTTTGGCTTATTATTTGAAGCTGGATTCACATAGTCATTGAATATGCAA TGGTTGCGTGCTATACAATATTATGTTGTAGGCGAAGATATGGTGTTAGT CAAAGCTAATTGAACTTTATATCGCAGTATGTTTTCCTAGTTGGCTAAAT CAATAAACAAAACAATCGAGTAATTATAAAGGGGCGAACGTTGACTACTC CCTCTCTCTCTTTCTTTCTCTCTCTCTGGTAAAACTTCTTGAAATCAAAA TTGATTAAGATTTTTTTTTTCCATTACCTCAAATGTACTTCACTTAATAT CGTTGAAACCTTTTTGTATATTTTTTCTAATAATTTGGCATTTGGAGTTC TAAATCCTACAAAACTTCGAATCTATGGAAAAAGAGATATCTGGGGTGAC ATGGTCGTTTAGCATTTTTAACTTGTTTTTTTATGTGGACGTTTTTAGGA TAATTTGAAGAATATAAACTACGGTATTTTCATTCTATCTTGCTTTTTCT ATCCAAATTCCCAGATATCAATTTTTATGGGTTTTTTTCTGAGTTTTTAT ACAGTGCGGTCAGCCATTATTGGAAAAACTTTAATATACTGGTAAAAAAT TATTTTTACTTGAGTATCACCTAATGGAAATTTTGAAATAATGGCAAATC TTTTCAATTATCTAGTCGAAGTCAAAGTATTGTGAGTTTATTTCAATGAC TTTTCTTATTCGACCGAAAAATAATCAAATACAGGATTTATAACGACAAA ATTGGTTTGTCAGCCAATAATAAGGGAGGGCTGGCAACCTTTTCCTAAAC GGTAACCACAACTAAAGAACTATATTTATCCTAAAATCGGTAATTTCTTT GGATTTAATCATTTGTGTAAATGTAGGAAGAATTATCTTTTCAAGCTTTC GAAAAAAGCTTTTTTGATTACTTTCTAAAGATTGATAAATTGGAAACCAA TTTTGGAAAATTAAAAGACCAGGTCTCGGTCCCTCGTATATGAAATATTG AGATAACACTAATTTTCATTAAAAAAAATATATTATTTTTTTGGTAAAAT ATTAATTAGTTAGGCTCATATTTTATTCTATAACTCATTGCCCTATTTTT TTTTCAACAAAGGGCGCTCTACAGGACCGTGGAGTAAGCTTTATATTTTT CATCAGTAATATATTCAAGGTTTTGCTGAACAGACGATTCATTACAAAGT AATATGTGAGTTACAAAAAAAATCACACAAGTTTTTTTGAGAATGGTGAA TTTGTGCTATGTTATTTTACTTTTTAATCTTTACTTGGTGTTCTTGACTT GTGTAACCTCAAATGAAGGTAAATGCTTCTTTAATGGGCAGTCTGTTCCT CTAAAGAATCCTGCATTGTAAACACGCATGCGTAGTATGTCGTTCTTTAA ACCATATGTAGTTAATTCCTGTGATAAGCAAAGAGGAATGGATACGTAGG GGTGGTGCAGGCACTTTCGGTCGGGGTTGGGGATGTCAACATTTGTCGCT CTTTCATGAAATCTGTCGTTCTTTAAGTAAATGCAGGATTATTTAGATAA ATCCCCTCTGGGCAATTTCCTACTTTATAAAAGGGCTTAATTTTATTCAA TAATAACATAATATCATCTATACATACATTGCTAAATTTATTTGGATGTA ACATACGATTTATCATGTTAGAATATTTATTAGAGTTGACGTACGCACTC CTTTTATATAAGCATACGGGAAAATCGGATCGAGGCTCAATATGCTTAGC AAAATCTCGTTTTCAGCCTTAAGTTATCCTTATTTATATGCTTAGACTTA GATTCGTTTTCCTTGGGTTCATGAAAATTTCGAATTTTTAAATCGGACCA TTGATTCGGCTCAAAGAATGAAAATTTTCTTTGTAGCTTGGCGCCGTAGG CGAAATCTTTTGGTATAAGAAAGCTCAAACAGCTTTAAAAGTAACCCTAA AAAGGTCGGTGCTTTAGAAAAGTTGTACGATTTCTTTTTACATTACAGCT TGGATGTATGCTTGACATTGTCCTTATTTTTTACCGAATTTAAGCCTAAG CGTTCTTATTTTAAACGTTATGCTTATAAAAAAAGAGTATACTAAATCAG TTTACTTGTAATCACTCAGAAGTTGATCGCTCCAATTCACTGTCAATGTA TTTCATTTTACAGCATTGACTGCTTTCTACCCTGAGGATGGCGCAAAGCG AATGACTTCAAATCGAGTGAAATTGATGCTGGATGTACCTTTCAACTCAA ATTTTCAAGGGATCGATACAAAAGATCATGTTTATGTAAGTTCCTAAATA CACGTACTTATTTGGATCTCAACCGCAGAATCCCTTAAATTTCCAATTCC GGTGGAAAGAAGTAGCCATCGAAGCAAAATTTTATACAAATGATGTGTTC TGATTTCTAGGAAATCTCTGTTATACTCTTTGTCTTCCTAACTGTGAACT GTTTAGCATAGTGCCTTGTACTTAAAGAGCAGAAACTTTCGCGAATATTA CTCTTGAAAGGAATTTAGCTGATATAACCTTCGCGAATTTTATAAAATAA TCTTTTGTTTTCTTCAGATAAGAAACCATGGCTATATTTCTACTGAGGGA TATCATTACAGTAAGAAGGGAAATTATATCAAAGATCATCGAAGAGGGTT TTACCCTTTTTGTGGTGATTTCGAACCAGGAAAGAAAGGTTATGTCAGCT TCTATCAATCTCAAGCAAAGGTACGTGTTTTTTTTAATAAGAATTTCCAA AATTTTTGAAGTCTTCGGATTATTTTAACTTTTTGGGTTTCAAGCCTAAA AATGTTCTTATTTTCACCCTTTTTAGAGTATTTTAGTCCATTTTCTAAGA AATTTGGTTTTCTTAGAGTCCACAAAGCCTTAAAATATTCTTAACTTGTT CTTAATATTTCGGCCATCGAAGCCTTATGTTCTTATAGTTTGTTCTTATA AAAGGCATGCAATAAAGTAGCCTCTCTATAACTCGAATCCCTCTTTCTGG CACCTTCTAATTTTCTACGTACAAAACTCTCTGCAATGAAATAATTGTTC CTTTTTTAATTACTTGTATGGACAAATTGAATTGTCAATGTCGGCTTCTC TCTATTTCGGATTCTCTCGCAGGCTAAAAGAACATGCATTGGTAATTCCT TCTTTATTTGTGTTTCCAATTTTACTTCCTTTTGACAATCTATTAATAAT ATACCAGAAAACTTAGACATTGAATATTGTGATGTTTCCTTACTGGCCCG GTAAGGCGAGACCAATTTAATTTGTTGTTCTACGGGCAGATCGTTAGCAA AATATATTTCAGTCAGTCGGTAAAATAAGAATAAATTTTTCATTTATCAG GGTTGGTAAACACCGAAAATGTTTTCCAAAAAAATATCTGGTTCAAAAGT TCACTTTATTTTATCTTCGATGAAGATCATAATAAAATCATAGTGTATGG AATGCTTGATTTTCTAAATTTTTCAATTTCTTGAATTAATTTTAAGCTTT ATTCAAATTTGATTCTTACAAATAACTTGTGTGTAAAATATATTGTAGTG GAAATTCAATGTTATTATTTTTTTTGACTTTAGCAAAAATAGGGTCGGTC GGGCCTGTAGAACAACAAATTAAATTTGTCTCGCCTAATTGATAAAACTG ACAACAACAAAAACGTTTAATCGTATAACTTATTCATTATTTCCAGAACA TTAAAGATTTGATTGATAGCGATCTTCAAAAAATGAACGTAGCAAACTTT GTTCCACTCAACACCCTTGTTGTTACCTATAAAATTGGTCGAAAAAGGTG AGAATGTTGTTGCTATGCACATTTCTTTCTATAAGCAAACCATGTTGCTC AGGAGGCACGAGCAGGCATGAAATCTGCTTAATCTTTTTCACTAAATCGC AAATGTAAAGCTTTTTAGGAAATCTTAAACTATGGCAAACGATAGTTCAA GACCCAATAGCACATTTCTCAGAAATTGAACTACTTACAATGGTTGCTTA GCAGCTCTAGCCCAGGCAGAGATTAAAATTAAGTGTTCTTCTTAATTTCC CGGTGGAGATGGGATTTTGGAGACTTCGTCCTCCCACATTTAATCTGATA TGCTTTGCAATTTGTGCTTATATTGATTCTTTTTTTAGACCTACCTCAGA GGTAGGTAGGAGGTGCCTAGACGATGCTATCGTCCGTATAATATAATATT ATGATATAACATAGTTTGTATACTATAAAACGTAATATGTTTCGCGGCGG ATAGAGTCTGTGTCAGCTACCCCCGAAAAAAAATCCCGTCTTCACGTTTG TTCCTCTTTTACTTAGATGAAACTCGTCTTAGACTATAACATAGTCTAGG AGGTGCCCAAAAAACCAGTTTTTTTTTGGCATTTTCTCAAGATTTCACCA TTAGTTTTTTGTTTTTTTTGCATAAAGATGCGTATTAGCAATGCCCAAAA CATGGTCAAGTCCGATTTTTGAGAAATCTTTTTGCCGGAGATCGCCGTTT TTGCAGATTTTCATTGGACTTTTTCTTCGCTTTTTCGCACATAAAAATTA TTGATAACATTGCCCACCATCAAGCATGATTCAATTGTCAATGAAACTGA TTTTTGCAACCGGAACTTTCTATTTCTCTTTTCTCTACTCCCCTTCCCTC TCCCCCATCAACAATCAATGATGAAATTTAATGCATTTTCGCTAACCGCT ATATTTTCTGATTGATTGTTTTTATGTTTCTCCTTATTGCTATCTAACTT TCATCTTCAGGTAGGTTCATTCAGCATCTAGCTTGTTAGTCCCAATAATA ATTAATCAAACTTTCAGGAGGAAAAACCTTAACCATTAATTTTTCTCATT ATTGCTATCTAACTTCCATCATCAGGTAGGTTCATTCAGCATCTAGCTTG TTTGGTCCTAATAATAATTAATCAAACTTTCAGGAGGAAAAACCTTAACC ATTACCAAATCATCATAACCTACAACACATCCAAAGTGTACATCATTACA ATTTACAAGGAATTATATGACGCAGCAATTGTTGGTTTTAATATTACTAA TTGCCAATCCACCATTATTACTCCTCAAAGAGCAACGGATATGGCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053858TCONS_00053858Clytia hemisphaericatranscript
TCONS_00053857TCONS_00053857Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053857-proteinTCONS_00053857-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_234supercontigscaffold_234:516054..525349 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.36 13.12 19.4 21.55 45.02 35.55 25.58 30.19 17.93 21.01 17.16 13.13 13.14 16.34 12.73 14.36 17.46 15.98 7.6 8.52 14.56 13.92 17.46 18.22 14.56 17.88 6.27 5.7 12.28 13.67