XLOC_033984 (gene) - C. hemisphaerica

Overview
NameXLOC_033984
Unique NameXLOC_033984
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_234:494318..501047-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033984 ID=XLOC_033984|Name=XLOC_033984|organism=Clytia hemisphaerica|type=gene|length=6730bp|location=Sequence derived from alignment at scaffold_234:494318..501047- (Clytia hemisphaerica)
ACTCTATGTTAGATTTGGATGAAGATCTAAAAAAGATAGATGTAGTTGCT GCATATGCCAGTCCTTATCATACCAACAGGTATTGAAAATTACCTTTGAA TCTTTTCTCAAAACACAAAACGTGTAAATTAAAAACTATTCCTTGATCAC AGCGACTTGTTTTGGTTTGCCTAGATCAATGAAGTATAAGCCCGAAGGGC TAGAAGTCAATCTCTTTGGTAGGATTTGAAGCCAACAAATCCTACCAAAG TTGCGCGGCCTTGAGCGGCTCCCCTGGTTTTTACACAAATGACAGATTGA AACTAAAATCTCCCGCTAAATTTCGAAAAAAAATATCAATCGTAAAGAAA GGAATTGCTAGATTCAATGTGTCGTCAAAAATACGGCGCATTTTTTAAGG CTTCACTTTTTCTTGCCTGAGAAAGGTTAGAGATTGAACTCTAGCCCTTC GAGCTTTAAACTCAATGGCCTAGATATCCCAAGTGCGGCACATTTTTTAA TTGACCGACGAGTATGTGCGGTGGTTAAGGGGATGCTTTTCAAGATAGCA GAAATGCAATTATACTATATTTTAAGGGTGGAACTTTTGATAAATGCACT GTAAGGGTTGAAATATTTCAGTAAATTCAGGATAGATTGCAAATTCTGAT TCTTTTGCTCTAAAAGAGTTGAAAATTTGGGAAAAATGCACTGTAAGGGT ATGAATTTCACCGAATTTTTGCTGCACTGTATGGACGTGATTCTATAAGC CATTTTTTTCGCTGCGCATACCGTCAGTTGGTAAACCCACTGCCATCCCT GGTAGAAATTGAAGCTTTAGATTTCTATATTTTAGGTTAAAAACTTGGAT ATCATGTCAAATAAAGCAAGTTATCAATAAAATTATTTTACAAAAGATAT TAAAAAATTTGGGACAAAGTTTTTCATCCCTTTTTAAATGATTCTATTTC CTTCTAGAAACGGTGAAGACGCTCTTTATATACGTGAGATATTTGACGAA AAACAGACATTCGATCATACAGATCACGCTATTACAAAATATTTGGAACT AAATACACAGTATGGAATAAGCCAACCAGCTTACAGCTCAAACAATGCCC AATATGGTATTAACCAATCAGATTCAACGCATTCTGGATTTGTCGCCCGA TGTAAAACGAACCATGCGGTCGTGTCAACATTTAACACGTTATATAATGC TCATTTTCAAGTGATCTTTGCTTCATGTGAAAATCTTAACAATGATACTT TTCTTGTCATCAATTTTGGTGATTTACCAAGATTCTCAAGATTTATGCAT GGTGTCTCAAATCCAGATTGCCCTTGGCAACAGATTAATAAAATTTCTTT GATTCAAACGGAGAGTTATGAATTTCAATCAAATATTGGTGTCCCTGGAC AGTTTGTGTACCCGATCACGAATCGTGAATGTAAATGTAAGTTAGATTTC AAAGCCCCCAAGGGATTAGATCCGAAACTCCTAAATGAGAAATGAAGCCA CGCTTGACCTGCATTTTTTTCAAACAAAATTTCAAAATGCAGCTTAAATC TTAAAGACTTCACTTTTTCTTGCTTGAGAAAGGTTGAAGTTTCCTCTCTC AAACTCAATAATTGTAAGTTTGACCAAGTTGATTAAATCCTTTTAGTCTT CAAATATTACTTTTATAAGTAAAGTAATCTTCTTATGAATCCCTCTATGG GAAACAATCACCGTAGCAATACAGGGTGTCCCTAATTAAAGTATCGAGTC GAAACACAACTATAAGTAGAAAGTTTTATGTGCGTGTTCACAAAATTGTA TTTAAGCTCCCCCTCTTTTTTCTTTGTCATTACGATTAATTTATACGTTG TAACTACCTTTTGTCACAGGAAAAAATGTTCGATTTCCAAGGTTGGAAAT TCGATATTTTTGGGTTGGAAATTTTTGTTTTATAATTGAAGGTTGGAAAT TTGAGCGATTACTTTAAGCTGATTTGGAAAACGTAAATTACCCATAGGTT TTGTAGAATAAACCAATGCGCTTGAAAAATCAAGTGAAAAAAAACAATGT AGAAATGGCAATTTTCCAAGGCTGGTTGGAAAACATGACTTTTTGGGTGG GAAATTTTTTTTTCCAAACAGTTTGGGAATTGATAAAAAAAGTGAAAACT AAAAATTTAATTTTATTCATTCTTTGACGTTTCGGTGTCTTCTTTGCACC ATGATCACAAGTATAGTAAAAAAAAAAAATCAAAACGAATTTCAATTTAC AACATTCAAAAAATTTGGTAAATTTTGGTAAATCAAAAAGTTTGGGAATT GAAAAAAAAGGTCAAAAATCGATGTGAAAATACATATTTTAGTAAATTTG ATACCTCAAGTTGAAAAACTAGACTTTTTGGGTCGGAAATTTGTGTTTCT CCCAAACAGTTTGGAAAACATTAAAAATCCATGTGGAAATTACATTTTTC TAAGATTGAAATCCTTTGTCAAGTTGAAAAACTAGACTTTCTGGGTCGGA AATTTGTGTTGCTCCAAAACAGTTTGGAAAACGTTAAAAATCCATGTAGA AATTACATTTTTGTGAAATTGAAACTCTGTCGATTGGAAAACTAGACTTT TTGGGTTAGAAATTTGTGTTTCTCCAAACAGTTTGGAAAACGTTCAAAAT CCATGTAGAAATTACATTTTTGTGAAATTGAAGCTCTGTCGATTGGAAAA CTAGCCTTTTTGGGTTGGAAATTCGTGTTTTTCCAAACAGTTTGGAAAAC GTTCAAAATCCATGTAGAAATTACATTTTTGTGAAATTGAAGCTCTGTCG ATTGGAAAACTAGCCTTTTTGGGTTGGAAATTTGTGTTTTTCCAAACAGT TTGGAAAACGTTAAAAATCCATGTGGAAATTACGTTTTTCTAACCATTTT CTGCGCATGTCCTTGAGAAAACCACAAGCGATTTTTCGCTCAAAACTGTT TTGATGTATAGCTAACCTAAAAATTAGGCTATAATGTGAGCAGTCAAGCT GTAAGTTTCCGTCAGGCGAGGCGTCTCTTCGGAGCGGCCTCGGTCAATCG CAGTGAGTTCGCACAGTGAAGCACATAGNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNATCTCTTTTGCACATCTCTACCATCACTTTTTGGATTTTGG CATTTTTCAACCTGAATTTTCGAAATTTCCAACCTTGTTTAGCTTGGATT TTGGCTTTTTTCCTACCGAATTTACAAAAATTCCAACCTTGTATTTCGGC TTTTTTCCACCTGGATTTTCGAAAATTCCAACCTTGATAAATTTGGATTT TGGCTTTTTTCCAACTGAATTTTAAAAAATTCCAACCTTGTTAAATTTGG ATTTTGGCTTTTTTCAACCTGGATTTTTGAAAATTCCAAGCCATGGAAAA TAATTTGGATTTTGGCTTTTTTCAACCTGGATTTACGAAAATTCCAACCT TGTTAAATTTGGATTTTTGCTTTTTTCAACCTGGATTTTCGAAAGTTCCA ACCTTGTTTAAGCTTGGATTTTGGTGTTTTTCCAACTTAATTTTCGAAAA TTCCAAGCCATGGAAAATGCAACATTTCCAACCTTGGACAATGTCCCACA TTTTCAGGTTGGATTTTCCATTGGATTTTATCTTTTTTCCAACTAAGAAA ACTTGGAATTTCCAACCTTGGACAATGTCCCACATTTTCAGGTTGGATTT TCCATTGGATTTTATCTTTTTTCCAACTAAGAAAACTTGAAATTTCCAAC CTTGGAAATCGAAAATTTTTTCCTGTGTGTAATAAGCCTGTGTGATGAAG AACGTTCTTATATTTTAGCGATAACACACACAAAAACTTTTCTACTCAAT CGCATGTTCAAACTCGACACTTTAATTAGGGACACCCTGTATTTTGGAAA CGGTGTAAACACTACTCGTTGACGTAATTTATAAAAAGGTCCACGCGCAA GTGTCGGCTGCTAATCAGACACGAAATTTCTGATGGATGATCCCTTGTTC GGGAAGGGGGGATGAATGAATGAAAAGTCTATAACAATTCTTCCAAATAT TTGTAAAAATCGAATTACTCGAGAGAATCTTAAGTTCGAACAAATCTTTA CAGATTTAAATTTATTCAGGGAGAAAAGACACTTTTTTATTCTGCTACTG GCAGTTTCATGCCACTTAGGTGACAATCTTCAGGCAATTATATTTGAATT TAGAAATTTAGATTTGGTTGGCGCTCAATAAATTGACACATGATTTTTAA AAGGAAATGCTTTTTTCTTGACCTGTGTAATAGAAATAAAGCATTCAAAG GATTTACACTACCACTGAGATAATCCACACGAGTGCCTTATCCTTTTGAG TAAAAGGAAAGCTGTTTGTCCTCTGTTATTTTAGTCAATGTTATGACATA AACAAGCAATTTTTCATATATTATTTTATGGGAAATCGAAATCTATATTG TTCCAACATAATCCACATGTTTTTGTATCATATCCTTTCCGAGGCGCGTT CACGCTGTTCGCTTGGCGTGATTGAGACGGATAAGTAACAGTTAAATGTC AGGTTATATTATATCCTAAATCGCAGCGTGTATGAGATATACTGCTGGTT GAAACCAATATGAAAATATATGATAATGATATGTTTAAAAAATATTTCAA AGTTTCAACATTCAATTTCTGCAAAATTATAGCTTTTAGATTTCATACCT AACTACATTACCCTATTTCATAGAAAAGTAGAAAAAAACAACTGCAAAAA TATACATTTCTAATAGACGATACCGGTTTCACATAAAAACTCAGATTTGA CTCCCGAGAATTCCCCACAATGCTTTGTGCGGAAAAAATTTCACCGTAAA CCTTTTTCCGCATAAAGCATTGTGGGGAATTCTCGGGGGTCAAATCTGAG TTTTCACGTTAAGCCGATATCGTCTATTATTAGTCTATCATTTCATAGGA CTGATGTTTTTAGATTTTTCTACGTCACTGCAGTAACCAACTATTTACGT TAGAGCACTCTTTTGCGAATACACCTTTTCGAATTCTTTTTGGTACTTTC TCTCATTTTGGCCGAAAAATGCCATATCTAAGGTGTGAAATAATAAAAGG GGGCTGAAATTAGTAATCTGATGCATCTTTTTGCGGACTTTGTATTTGTA TTTTGGCGCCCCTGTCCCCTACCACGCTTTACTGAAGATAAGGTTCATGC GCTCAAAAGTTAGTGCCCCTATATATTCTAACACAAATTGTATCTTTTTA AAGCTCCATTTACATCAACGACTACGACCACTACTACATCCTCGACAATT GTTTCTACACCACAAATCACTTTGCCAAAGACAACACCACCACCAAGAAC GACTGGAGCGAAACCCATATCAGAGAAAAAAACAATCTCAATAAATTCAT CAACAAACCATCCTCTACAAACAACAACTCTTCGACCAATACCAACAAAA TCTCCGAAAACAGCACTGCAAACAACAAAATACTATTCAAAATCAACCCA AAGTTTTCAACATACAACATTGGAACACATTCAAACTACACCAGAAAAAC AGGATTGCAAATTAGTCAAAAATTCAACTAATTGTCAACCGATATCAGCT GCCCATAAAGGTATGTTTTATTTATTTTTACTACTACAGTGAAATAACTC TATAACTCGAACCTCTGTAATGTCTCCTTTATTCGAACAAGTTTTTTCTT GGTTCCTTTAAGTAACGAACCTTCTAAGTTATAGAGACTTCACTCTGCAT TTTTTTTAATTTCAAGGGTAATTATAAGATTATAACGGGATTGTAACATT TAAAATATTTATAGCAAGATCTAATGGTGTGTCAATAACACATTCGTCAC AAAGCTAGTGTCCTTCCCCTCTCTCATTGTGGAAAATCAGTTAGGCCATA ACCAAAAAGTACCGTAAAATTCAACCCACGAAAATAAAATCAAGCTGAAT TCTCATCATACAGCAACCCTTGACTGAGTTACTGGGTCACTGAATTGTGT ATGATACTATCATAGGGTGTAATATTTGATTACATTTTTAGATATGGTTT CAAACATGGTAGCCATCACTGCACTGGGAATCTGCTTGGTTTCTTGGAAA CTTCTTTGATTTTTATCAGACAGAAGAAATTATAATCCACCGTGGCACAC AATGTTTGGTTAACATTTTTTAACGTCGGTCTGACGTTGTATTGGCGATT TAAACTGACTGTATGGACATCAGCTGGGCCTTATTATGACGCTTTTGTCG ACTGGAGAACATTTCAAAGAATTCACAATATGGAACTGTCTTACTATATT TAAAAAATCAATTGTTTGTAAGATACACCTATCAAAATCGCGAGGAGACT GTTAGCGTCCACAAGGTAGAATTAACATCACACGTCTGAACTCCTAAAAT AATGACGGCATAAATTTTCGTTAGAGGAGACATACCCCAGTGCGCCTTTT TTTGCTGACGGCATACCTTCCTCCATTTAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053854TCONS_00053854Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053854-proteinTCONS_00053854-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_234supercontigscaffold_234:494318..501047 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.15 0.27 0.11 0.03 0.29 0.36 0.2 0.48 0.05 0.13 0.09 0.02 0.68 0.39 0.05 0.19 0.44 0.79 2.37 3 0.9 1.27 0.46 1.1 2.73 2.85 0.08 0.14 0.21 0.07