XLOC_033841 (gene) - C. hemisphaerica

Overview


Name	XLOC_033841
Unique Name	XLOC_033841
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_233:344693..356008-

gene from alignment at scaffold_233:344693..356008-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_033841 ID=XLOC_033841|Name=XLOC_033841|organism=Clytia hemisphaerica|type=gene|length=11316bp|location=Sequence derived from alignment at scaffold_233:344693..356008- (Clytia hemisphaerica)
AAAACAGAAAACAGTCAGACTGTGCAGGTAAAGTTTCAGTTTCAGCCTTG
GAATTCAAGCTCAAAATCAATTGTAAAAGGGGTTACGCACGATACGAAAA
TCTCGTGTTCGCAAGCGAAAGGTTTTTTACACTACATACCGTAGGATTGC
TANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNTAAAAAAGCTGAAAAATCGATTTTATCACCCCGCATATCAGCT
TTTTTTCCCGCGCTTTTGCCAAAAGAATCGCACTCGCTCGCTGCGCTCGC
TCGTGCGTAATTAAAAGAATATGTCTCAGACAGAAAGTTCTAACATCTTT
TAGCTGCATGGGTGCAGGCAAATTTAGTCTGCTCTGGATCTGGTGCTGGT
CTGGATTTGATTTGGTATAATATAATTAAAAGTTAGTTGAAGTTCGTTTT
TGTTTTGATATTCTACGTTTGACTTTTGATGTGCATTTGATATTTGTTTG
ATATTCTTAAATTACATTAGCTTTTTGAAGTTCTTGTGAGGCGGACATCG
AAAAAATGCTCTGTTCGCGTCGCAACGGGTGATAAAAATGCATGCGGGCG
GACGGGCGGTCAAAAACATTCCCGGGTTTTTTTTAATCACGCCAGTAACT
CAGGGGCGGGTGGTAACGTCAGAGCAATTGAGAAAAAAGCTACCGTAGAG
TCGTCTAATCTCGACATACGTCTTGCAATCTCGACACCGGATCTGTAAAA
TAATCAAAACAAACCTTGAATGAAATTCTTGGTATCATTNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTTTTATAAAAGAACAAATTGCTTTTCCCAGATTTTTTTC
CGCATCTCCGCACCGGAAAATCAGCGAAAAATTTGATGCGGGCGGGTGAC
GCGAATAGANGTACGAAACGCATGCAAACTTCCTCGTAACTTTCTCGTGT
CCATCATTAAAATTTTACAACTTTTTTACGCTTCAAGTCACGTGATAAAA
ATAANGATTAATTTTACTTTTACTTTAGAATTGGAAACTATTGGGGGCTC
TTCCAGAAAAAATTTGATATAAGCAGAGGGAGGCCGAAAGGTCGCGTGCG
GAGCGGTAACAATATAAGGCACTGTGGTATAGTGGTCATTGACCTTGGTT
ACTGCACAGGCAACTGAGGTTCGATTCCCACTCGCAGCGGTTCACTTGGC
AAGTGAATGAACCTTCGCCCGGGTCAACCCATGCCATATGAGGGGGAATT
GGGTAGTCAGTCCAAGGTGCTGACGGGGCGCTCATTGAAAGCGTCTATAG
TTGCGAAAATAGGCCTCAAAGCCTCCTGTAACTCAACCAAATAGAAAAAA
AAAAAAAAGTATAGGGGGTGGACAACCAACACTGAGATAAAAAAAGCACT
CGGAAATCCAGTCAATTGTCAATTTTTGAAAGTGCTTTGGAAATTCCACC
TGAACCTTTGTGGAATTTTCACACAATTTGTCAAAATGGCCTTCTTACTA
CTAGTTGACAGTTAGTCACACTAGGAAATCTAGCTTTCAGGAAAAACAAC
ATCAGTCATCTACAGGATGTATTTGCACAACAAGGATAAGAGTTACCTGA
ATCAAGTTTGCAAGACAATTAATTAAAACTTGAAAGTTTGAAACAAAATC
GGTTAGTCACACTAGGAAATTAAGCTTTTAGAAAAAACAACATCAGTCAT
CTACAGGATACATTTCAACAACAAGGATGAAAGTTACCTGAATCAAGTTC
GCAAGACAATATTTAGCCTGGGAATCCAAGCGTTAAACTTTTTTCACAGT
CTAGTTTATGATATTTTTGCTGCTGGTTTAACGCTTGGCGCAGGTAACTC
GCCTGCAGGGAGATTTTTCCCTGCAATGCAGGTTCGGCCTGATTGGCCAG
CTTTCAGCGTATTACTTAGCAGTACTTTCGCGCGCATTTTGATTATTTCG
ATGCGCGCGCATAATTTATGGAAAAAGTTGACTCTGCAGAAAAAAGGAAA
ACAAATGAAAATGAAAACATAGATTCATTTCAAATCAAAATGGCTGTTGG
CTGGAAGTTTAGATACATGTGGCTGATGTTTTTATTTGGTTATTAGTAGC
TTTGAAAGTCTTTATAGATTGTGGAGGAGTTTTATGGTAAGTTGATTATG
TGTGTTTGCCTGGGTTTCCAAAGTTCAGAAACTCTGTCAACAAGNGCCTA
TCCGGCGGTGCGCGGATCTAGGTGGATTCCGCCTCCCCCGTAGATCTTTT
TCTTGGGAAGTGGATCTTCAAATTAGTTTTCACAGGTTGGCTTGGCTCTA
ATTTTTTCATCTATGGCTCAAATTTTAGGCAATTTCTCAAAGTTTTTGAA
AATGTTAATTTCATTAAAAAGCGCCGGGTTATTTTTTCATGAATCCCTTT
AGAAGTTCTGCGGCGCATTTTTTTGCTTGAGAGTCAAGTAAACGATATAG
CGTTTTCGCAGCATTAATCTTTGATACTCATTTTGGTGGGACGCTAGTGT
GACTAACTGAAAATAAAACGTGCAGCAGCCAAATATCAACCAACCAAATT
TTGTCATTCAATTCCCCGAGACAGCGCTTCGATTTTTAAGGCCTTGTTTA
TACGCTAAAGTAAAAATAATTCCGCACATGTAAATGGGTTAATGTTTGAG
GTCCGGCAAAATTTCCGGTAAATAGCCTATCCGGTGGTGCTCGGATCTAG
GTGGGTTTTGCCTCCCCCGTAGATCTTTTTCTTGTGAAGTTGATCTTCAA
ATTAGTTTTCAAGGTTGGCTTGGCTCAAATTTTTTCAGCTATGGCTCAAA
TTTTAGGCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGCCAGGTTA
TTTTTTCATGAATCCCTTTAAAAGTTTTGCGGCGCATTTTTTTGCTTGAG
AGTCAAGTAAACAATATAGCGCTTTCGCAGCATTAATCTTTGATACGCAT
TTTGGCGGGACGCCAACTGTGACTAACTGGTTGAGTACCGGACGGTGCGT
ACGGAAGGTTGGAGGCAGTATATAGGTACTGAATCAGGGGGGGGTGAAGC
AGTTAGTACAAGACATCATGCCTACTAACTGCTTTCTCGGAAGAAGTTAG
TAACACCACCACCTTGGTACACTTAGTACAGTTAGTANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNCAGTTAGTACATCTGAGTACTAAGTGATTTTATCCAATTCATA
TGGCACACCACCACGGTACTAACCGGCATGATGTCTTGTACTAACTGCTT
CACCCCCCTGACTGAATCGCTATTTTTTTGTCTATGAAAAGGTTGGTGAC
GGGACTCAACTTAAAGTACCGTGAGTGGTCCTAAATCTGACAGCCCTGCC
TAAATCCGATGGGCTATTTCAAAGATACAAACTAAAATTAAAATAAACCA
TTCACTGTGACGCAATGAAGATGCCAAAGTGTCAACTAAACTGAGATATT
TGATACACTGAACCAATTGAACCAAAACATTAATTGCTTCTTATACAAAA
CATAATTCTTTATTACAAAATTGTTAACGTTTTAAGCACGAGCAACAGAT
TCAGAATAATAGAGGTAATTATTTTTACAACTCACACTTTTTTTGTCACA
TTATGTCATTAATTGACATCTTGACATTTTGGTCATCTTGTTAAATGTTT
TGTTTCTAGAGTTCTTGCAATATAGTTTATTGTTCAACTTAGAGAGGGAA
CATTTGTAGCATAGAATTTTTTTCATAGCAGCTATTTGGGGGATCGGATT
TAGACAGGGCTGTTGGATTTTAGGACCACTCACAGTAATATATATATAGG
AACTGATATATTTTTTCATAATGATTTTAGTTCTTTTTCGTTTTTGGTTT
TTAAATATCTAAAAGATGGATGACGGAAGCTTGAATTTGAAGTCAGGGAA
GTGTGGGGTAGATGTATTGATATTACCAGTCCCGAATCCTTGTTATTTTG
CTTTAACAAGATGGAATTCGGTACGTACTGAATGACCATTTTTTTGCCTG
TGAAAAGGTTGGTGACGGTAGGTACCGAATCGCTATATTTTTGCCCATGA
AAATATTGGTGACGGGAATCAACTTAAAGTAATATATACTACCTATTAAA
TCTTCAGTAAGGTAGGTAACAAATCAACAAGTTTTACATTTGCCAAATTT
AATGAGCTCAAACTAAATGGGATACAGTATATTTCACTAAACTATACAAG
ATAAGTAAACATAAATTTATCGCTCGCGAGCAGATCTTAGCTAAGCGCAC
CTCTCTTATTCATTACCCAAGAATTGAAACGGGCAAAGATAACCACGCAG
GCTGATGGCGGAGAAAGGTTTTTTGAAGATATTTTCAGTTATAATCCAAG
GTAGAACAAACGAAATATAGAAAGGGGTATATTTCAGTGCTCTATACGAT
GATTGGTATTTTTTCAATTCTATGTTTAGATTTTTCTACCCAGCCCTGTC
TGCCTGTCGCGTCCTGTTGCTAAGACCTTTGCTTGAAATTAAAAGCAAAA
ATACTTTAGCGCACACTGCTGTTCGCGTAATATCGATGGAGTGAAAGGAA
ATCCTGACTGCCTATATCAGGATTAGAAACTAGGCTAGGCTAGTCTTACC
TCTTTTATCCCTTAAAAACAATACAATGCTGACAAGTTGACACAACACAT
TGACAAGTAATCCTGAGAGAAGTTTATGTTGAAATCTGCAACAAAAACGA
AAGTCTGCTCTTCTATTGATTGCTTCCCGGCACTCATTCGCAGTTGTTTA
TCAAATTTCCACCAATGAAATTGCCGCATTTCACACAGCCATTATTTTTG
GGACCCGTGGCCTCTCAGTGCCTTGCACGACAGGCGGCCATAAAATCTCA
TCCTTAATAAAATATTTGTTTCAATCTGTCAGTTAGTGGAAGTACTTCGA
TTTGTGAAGCGTCTTTACGTCACATAGAACAAAAGAAAATAGCAAAAGAA
CAAAGGAATTATTTAAGAGTAGTTATCTTTGGAATTGGAAACTATTGGAA
GCCAATAGAGTTTAGTTTCAAGGGTTTCTGTGCCAAATTAAGCAAATTTG
AGGTTCGATGGTTACAAATTTTTAGAGGGAGCACACTGCCAAACTAAAAA
ATAGAAAAATGACAAGGAAACAACAACACCCCTTTTGTAAAATCACATAA
AGTAAGAAGTAATGTTGGAAATATAACTACTTCAAATGTACTGTATATAC
ATAATAAACAAACCTTGAAATATTCTGTAACTTATCTGTAGAGCTGACAA
AGCAATGCAAGCATGTCTAATTGGTCGAATTGTGCCCAGCCACTAATCGG
AACATTCACAGGGTTTTCGATATTTTTCTATGCGCACACATAGTTTATGG
AAAAAGTAGACATTCCGGGCTCGAAATAACGGTCGGACATGGGACATTGT
TCGACCCAAATAGCTTCATGTTCGACCCAAAAATCATAATTTTCAAGCTA
AAGCAACCCTGATCGGATTTTATGTCTGACCCACATGAAATCGTTATTTC
GAGCCTTGGACATTGCAAAAAAAGATACGAAAATGAAAAATATTTCTGAA
CTTATTAAACAATAATGGCAGGGAGGGAGCCTTTATGAATCAAGGCTGAT
GTTTTGATGTACTAGTTTAAAGTAGTTTCGAAAGTCTTAAACATGACCCA
AACTGGACATATTCAGGACGTGTTCAGGCCAGATTTTCTGAGACGAAAAT
CCAAAATTTTGTGGCCCAAACTTAGCCACCAATGTCTAGGCCATTAGAAT
GTTTTGGGTTTTTTTGGCCCGAACATGACCCAAAAATGTTTGGGGTATGC
ATGTTCGGGTTATACGGTGGATTGTCTATCTTTAACCAAATGTCAAGCCG
TTTATCCCTTACCAACATACTCTAAGTTGGTCTAATATGTAATGTCAACA
TCCCTTGTCTAGTTCCTACACCTTTTTCGGAGATTTGGATTTGTCATTGG
AAGGTCAAAATCAATGATTGAAAAAGATGTTTTCCTCTCTTCCAACAAGA
GTTTAATTACAGCTACACCCCTGCCAACCCACCAGACTGTTTAATGTTTT
TATCCACTGCAAAAAATTATTATTAACTTAAACTTTTACAGGCACGACCG
CCCCAGAAATTCCAAAAATCAAAATCAAAATAAAATTGATTTTATTTGTA
CATTTTTATTTTCATTGCTTTACATACAGACTGCCAAATTTTAAAATTTT
GGTAGTTTTTCCAATTTTTTGAGGGTTTCATGTTCAATTCTTTGTATCAT
CCATGAATTCGAGCTTTTTGTATCTTTTTATTTTCTATTTCACATTTTTG
TCAAGATGTAGTAGTTTTGCTGCCTTTTTAGGATATTTCATAGGTGAAAT
TGTACTTTTATTTTTGTTTTTTGCCACCAACCGACCCTCTTTTTTGGGTA
GCTTGGCACGTAAAAAAACAAATTAAATTGGCCTCATCTTAATTCTTACA
CACAAGATAAAACTGTCCGGTGTCCTACTACATTACAAATCTTTCTTAAC
ACCTAACGAAAACTAGAACGTTTTCTTTAGCATTTTAGCACGCACCAGAC
ATGTCTGGTGTTTGGATTGTCTTGTGAAATAAAGTTTCTCATTTGACACC
GAATATTTCGCTTTTGCTCCAGTGCCTCAATCAGTCTGGTATGTCAACAA
GGTCGTTCCCAGCTCTAAAGATGGTTGTTCGGAATTAAAAAACTAAACAC
AAAACTATTCTACTTCACAAACTTAGTACTGCTAAACATGATTTTCTTAA
ACCTCTGGCATTTGGTTTACACCTGATAAGAATGCATTGGCATTTTTCGT
TTTTGGAAAAGAAAGAAGGAAGTCGTAAACTGTCTATCTACATGATATTA
TTTTTTTATATTTAGTTACAAAATAATAATGTTTTGGTCTTTCAAGAAGA
TATTTTTGGTATTGACAGTTATTTTATCGTTTGTTGTTTTGTCATGGTTA
GCTTTTATTAGACATGTGGGGCCACCACCTCATGTGCCTATACAAGAAGA
TTTCTTCCAGTCTGTGAACCAAGCTCAACTCTCAGAGAAATGGAGTAANC
TTTTATTAGACATGTGGGACCACCACCTCATGTGCCTATACAAGAAGATT
TCTTCCAGTCTGTGAACCAAGCTCAACTCTCAGAGAAATGGAGTAATGAT
GCAGAGCTTGATATACAAGATGAAGGAAAATTCCATTTGGTAACAAACAT
TGTTTTGGTGCAACACAAAGCTTATTCTGCTAATCTTCTTTATAATAATT
TGCGACCACCAACCATGAATGAACTATCAGACAGGCAACATGAAATAGAG
ACATCTTTACAAGCTAATTTGAATCATCCAAAAGTAGCAGCTGTTCATAT
TCTATATTTTCATCCAGCAGTAATGAGCTATTTACATCGTTTGAAAATGA
AAAACAGTAAAAAAATGGTTTTACATTNTGCAGTGATGAGTTATTTACAT
CGTTTGAAAATGAAAAATAGTAAAAAAATGGTTTTACATTTGACAAGACG
TGACCCTACTGTTGCTATTAACTTAGATTACATTCAAAAATATTTGAAAA
ACAAATACGTTATGTTGATTCATCAAGACAATTTTCTTGGAGAAGGTTGG
GAGGATATTAATTTTAACCTCCTCCGTAACCAAAGAATCATGTATGCTTT
GACGAGATACTCTATAACTGAAAAGTTCCCATGCAATGCTGCACAGACTG
CTTCTTGCAACGCGGGTTCTATATATCTGGGCTCACATGACACTTTCGTG
TTTTATTCAGATAAAACATTTCCCAAAGAAATGCTCAAAGAGATTGATAT
CATTCCTAGTTCTGCTGGTATGGAAAATGTATTGATATGGTATTTTCGAA
AGGAATTAAATTACCGTGTTACAAATCCATGTTTGAAGTTGAAAGTTTAC
CATAATCATTGTATACCTATTCGAGAGAAGGGCAGGAAGCGGTATAATCG
GAAAGGTAAAAATGGTTTGGCTCCATTTACAAACGACTTAGGGTGATTTT
TTAAAACTATGATTTTCTGTCCCATCACTGCCCCAAACAGTATGGTTTGG
CTCCTCTTACCAACCAATTGGTGAGATTTAAACTGTCGTTTTTAGTCCCA
GTACTGTACCAGGAAGATTCTTCGTGTAGAATTTCCCAAATCGGGCAAAT
TATGATCTTTCAAATT

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00053652	TCONS_00053652	Clytia hemisphaerica	transcript
TCONS_00053651	TCONS_00053651	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00053652-protein	TCONS_00053652-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_233	supercontig	scaffold_233:344693..356008 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.32	2.24	1.92	1.57	9.96	7.6	8.17	6.83	5.39	6.14	3.25	0.64	1.73	1.42	2.92	2.06	5.35	2.74	0.44	5.76	2.61	1.7	2.17	5.15	3.72	4.64	0.71	0	0.66	2.22

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XLOC_033841 (gene) - C. hemisphaerica