XLOC_033805 (gene) - C. hemisphaerica

Overview
NameXLOC_033805
Unique NameXLOC_033805
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_233:545651..549611+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033805 ID=XLOC_033805|Name=XLOC_033805|organism=Clytia hemisphaerica|type=gene|length=3961bp|location=Sequence derived from alignment at scaffold_233:545651..549611+ (Clytia hemisphaerica)
ttattATTATAGATTGAATTTTTTAAGAGATACTTTACACCATCAGactt gtaaaaaatattttagtcaGAGGAGAgacaaaggttttatttttattttg cagCGTTTCTGTGTGATATAAAAAATGATATCAATTGTATTGTACCGTGC ACGTATAGGAAGCTTTGCTTTCACAGCTCAAAGAAACATGAAATGTATCA CTAAATCTATTGTTCTTGGTTCTGAACTTTCCAATGATGCTCTCTCAAAA CTATTGAGACCTGTTCGTTTCGTAGCACTTTTAACCCTCCTATGTTTTGC GATCCCAAAATCATTTGAACCAACAGAGGTTTTCACACCTTTAGATTTTA ATTGGTTTTCAAGAAATGGAATTTTTGTTGAGTATCCCAATGCAGTGCAC AAATTAGGAGATGAAAGCCTTATTTTTCTCAAAGTGAATAACACACTTCT ACTATCAGGTGATGTAGAACTTAACCCTGGTCCTAGTGTTCAAGGTTCTT TTCATCAGGGTAACCGTAAATTCGGTGAGACAGCAGGTATTCAATGCtcg tcaaattgtttttttgctatttgctATGCCCAATTTAGAAAATTATCATT GTGGAAGACTCATGATTTGGATTACGTTTTAGACCAAGGCGATCTGAATT TCAAAAAGCTGGGTATCGTTGGTAACTCCCCATATATTGAAGAGTTTTCA AGATCTATTGATATAGGAGGAAGTATGTGTGCactaaatttcaatatttt tgaaggTTATTTTGAGACTGATAATATTACGGTAAATTTTGTTCAGGAGG AACTCCTATTGCAGCATTCTGGTGCAGTTTTAGTGATAGCTGGAAATTGC TTAGCTGTAATGCActacaacaaaaattattttctttttgactcGCATAG CAGAGACTCTGAAGGCCATCAAATTGAAAGCGGAATTGGAACTtctgttc ttttaaagtttgaCAGGTTACAAGAAATTAAACAGTATATAAGATCTGAG TATAAGAACACAAATCTTTTTAACATTATTTATctcaaaactgatttttg taatgagaaaaatataaaaagtactATTTCGACAGAAGTCATACGTAGAC AAAGAAATGCTTCATATAAGAGATCAGTCGAGAAAATCAAAGGCACTGAA AAGTATAAAGATTTATtgcaacaaaaaaatgtttctcttaAAAGGTTACG TGAAAAAATTCAAGGCACTGATAAGCATGAACAAGaaaaggagaagaaaa gacaGCGTCTAGAATTGAttaaaggatcagaaaaacatgaaaatgaaaag gaaaataagcgTAGCGCTGCAAAATCTCTTTATAACTATAACAAAAAACT GAATTTAGGAAAAAGGGTTGAGAATTtcaagcagaaaaaacaagacGGTC CATATTTTATATGTGTAATATGTAACCGAGGCTTGTATAAAAAAGGAGTA ATTACTTTTGATGAAAAGAAGTACACAATTGGCCTTGACGATTTGGAAAT TGATCCTATTGCCTCCTATGACAGCAATTTCTATATATGTAAAACTTGtc ataaaaaactaattaaaaatgaaattccatGTCAATCTGTTTCTAATAAA CTCCAAGTTTTTAATCTCCCTGACCATTTGAGTGATATAAGAAAACTGGA AAGAATTTTAGTAGCACAGCGgattttattttccaaagtcaTGATCATGC GcaaaggggaattccctaaaTTGCAGGGTGCTATATGCAATGTTCCGATA GAAACACCAAATGTATGTAAGGTTCTTCCTAGAGGAAATGATAGTAGTGG TATCGTAAATGTTGAATTGAAAAGGAAGTTATCCTATAAAAACCCTGTTA TTTCTCAACAAGTCAGgcgtcagaaaatttttgaaattttagatttttta gtcAATAAtggggccccccagcggtttgcgtgaatgtgtgaatgggcttt tttggttgcgtgaatgcgtgaaaatcgaaaaaaaattgcgtgaatgcgtg aattgaaaaaacttgcgtgaacgtgaaaatccatatttctattgcgtgaa cgcgtgaatttttccttttcacagtttgtagaaaacccctaggtgcgcac ctatcccaaattcaagggatgccaggtgaaggtgcacaaaaaaatcagca actttcaaattctctattttgtaaaacaattcatgatttagatgcgcttt ctagcaatctagacaccttaaatttccagaatttttcgctcgggccaaac atgtcccgaatcttaaataactctaattttccctcttgaaagtgtttgtt taagataaaagcatggttatgcatgatgagtgattcagggccagggccag ggccagccAGGGCCAGAGCCACTTGgggcaggaggcggccatgacttcac cacgtttttgcaaataaaaagaaacttatttcaaagaaatttttacccat gatgtagaTTTTCAataacctgatttcttggcaaaattagtctgaaatgg agtcgtatttaagcacatcagagggttaaaatagattttttttctgtcgg cgcaaaacatggttgcgcctccttagtcactatgttttcggcccctccac gttaggaaattaattcgcaagccctgattaaaacctttctttttaaatNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNAGCTATtaagcatcatggtgtcat actcgagttttgacctatttttgataatgtttaagctattttttgtacaa aaattcgcctgcggcgcatatcttttcacttagtatcgcgatacgttaac tgcagaagcttcaccttttccaaacgatcttgacaagttagaagaatcaa atattttgcgtgatggcattaaagttgaaaaattacgtaacgctttctat ttgggggcttctaatgacgctaccaaacacggtgttttatagtcaggtct acaggaaaaaatcattactgagttaagtttttctcaagtgcattaccaga tccggtcgaataatatctcgagCACAGCcttttcatacttttttatgcaa atcgaacgttttactccatagtggcggaaattacgtaaattacgtaactt agcgaaatgtgcaagacctctgtttttgacattttccccgattttttcag aaaatttcaccgatttcccaaaaaattgggtttgcgtaaatttcgagaaa aacttgcgtgaatgcgtgaattgcgaaaaaattttgcgtgaatgcgtgaa atttgggtccgctgggggggccNCCCTGTTATTTCTCAACAAGTCAGgcg tcagaaaatttttgaaattttagattttttagtcAATAATAACCCATTAT ACCATGATATTAATATAGATATGTCAGCTATTGATCAAATCATTGTCAAT AATGAACAAAACACTAATTTGAGTGATTCCTTGTCAACAAATAGTTCTCT CGCAATGATGTAAGGTTTATTGATGATTCAACAGTTTGTCTGATAATCAA GCCCTTCGAAGAGCCATtggaaaatgaatttgaaatgaaaatgagtCTGA CGATCCACTCAGTCAATATCGCTCTGCGACATGTGAAACAGTAATCGTAT CTGAAGTACCTAATGTAATCGTGGATGATGAAAATGCAatgtaatttttt ataagaaccag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053563TCONS_00053563Clytia hemisphaericatranscript
TCONS_00053564TCONS_00053564Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053564-proteinTCONS_00053564-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_233supercontigscaffold_233:545651..549611 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.72 1.55 1.94 2.22 4.53 3.39 3.65 4.76 3.12 3.99 2.48 3.21 2.07 2.22 1.24 1.85 1.19 1.69 1.54 1.93 2.37 2.21 0.79 1.15 2.92 3.85 2.21 2.12 1.91 1.66