XLOC_033777 (gene) - C. hemisphaerica

Overview
NameXLOC_033777
Unique NameXLOC_033777
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_232:100378..107063+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033777 ID=XLOC_033777|Name=XLOC_033777|organism=Clytia hemisphaerica|type=gene|length=6686bp|location=Sequence derived from alignment at scaffold_232:100378..107063+ (Clytia hemisphaerica)
gaaaaagaaccaGAGAGCAATTCGTGGAATCACTTGAAAATGATTGGTTT GATATTCTTGAGCAAAGGTAAATAATTAGAGGAGACGGTCAAAATCTCAT ATTGAAACATATAGATTATTTCAGATTAAAGAATTAAAGATAAGAATCTG CCGGGAACACAAAATAACCTTTCGGCTGGTAAGACAGAGCTCTTATTATG GGCTCTGACCATAATCAGGAAATTTGTTAAGGGATTTGAAGATGAAACTC TTGTTTTGGGTTCCttgacattttttgacaaaaaattgcaattacaGGTT GTTTGTTAATTTATTGTGTCAAGAGTATATTTAATTACAAAATTGACGTT AGGAACTTTgattaaaaagacgttaataaaatgttaatttacactctttt acaaaaagtgcttagtttcaATGGGCAATTCaccttttttctttcaattt ttttttttaaattgtccaCCGAGAAAAAAACTATTTGAATTTCTCCGAAG TGTTGTCAAAATTTATGAATCAAAACTTATGACTGCTTTTCTACGAAAAA TTGGGacgaaaaactggtcaaaaccATTAAttagatacaccatctaccgc aaaaattgtttcaaaatcttttttcttcccCGGAAAAAAGGACCTCAagg ttgaaatactcttcttcgggttattttaaaaagcatgGTACCCCAATTGG TGCACCAATTGGGGTACTTGTTGGGGTACCACTTTCTGTCCTTAATTTTG TTAAATGACACTTAATTTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNCATTGATGATTTAATAAAGTTAGATTT AAGATTGTCACAAAACTTTTGTCACAATTGCCGTTTTCCGACACGAAGTG AAAATCTACTGCTTTTTAATTAAATCAGCAGCCATCTTGCTTTTCTCCTT TCCTACTTCAAAcaattacagaccagaataagtAAGACCAGAATAAATTC AGTAACCAAACCAAACAGTATTCCACTCCAGTAACCAACATAATATTATA GCTTAAAATCAGGAGAATTGTAAGGTACTGGCTAGTAACATCTTGTtaat atcttttctttttacatgTCAGAATGCTGACAAAAAATGACACTTTcttg caaaaatatttaaaaaatattgaaatataataatcGTAAGTCAAATTCCT CCAAAAAGACTTATTATACTGAAAGTGATGctcgattttaaaattttcag attcaggaatagttggcctaaagaaaatacttttgttggttacatcataT CGGACAGAAatctatattttgtacatggcaaatatgaaaaattcactaat CCATAAGAGCCCCCTTAATTTCCATTGAATACGTACACTTCATTGGCGTG AAATTTTCGACGAAAATCCTATTCAATTTGAATGAGTAGAATCAGTAGTT TGAAAGGGGCGGTTCCTTGAGATCCAAATTTTTAAGTTGAAGATTGTATA ATGAAAATATCTACGCCTTATTTCGATAAACTAAATTGATGTTGTGTCTC ACAGATGAGAAAATGGCAAAACTAAATAATGTCAAGGAAAGCTAATACAT TAGCCTTGTGTAGGCTTCATGTTATCACAGCTGGCGAATTTCTTAAATTT AAATAAAGTATTGACATTGAATAAAATACGCTTTAAGTATAAAAGATGAC ATGTGTGATTCGTGAAGATTTTCGATGAAAGATTTTTACAGTTTAAAAAA GAGATGTAGggttttttgaaacatttcaaaagtttctggataaattgaaa atttcgagaAATGCTTAAAAGCAACTTAGAAAGACAGAGGAATGATCTGC AGTCTGAATGGTATCTATTTAATTAGTTCAAATTTTAATTGCCTTCTACC TTTACTTTCTTAATTCataatttttgtgtacatggGAAATAGGGGTGCCT GAAGATTATTTGTATTATTACAAAAAGATATTTGTATTATTACAAAAAGA GATAATCGAtattgaagatattctttatatTTTTAGTTGGTTGCACATTA ATGCTGATGATGTTGTTGGCTTTACCAATGTCTATGGTCGTTATTGATAA GGACAAAGCTACCATTCAACTTTCTTATACCTGTTAAACGCAACTAATCG ATTTCTAGCCCTAACCTCTATTTTATATGATAATAAACAgactttacttt atttttttgtgggAAGCCAAGTAATATAGGACTTTTAAACAATCTTTTAA TTATTCTCCCGAACACGATGTCCGTAGCTAAGATTTGAACGGAACATTCA TTCCTTGTTTATGGTCGAGGACATGTCTGTTTCGTTGAAAGTTcattaaa tctcaaaaattggaTAATCACTGGGAAAAACATAATGTGCCTGAGAGATG CCTTGTAGACTGTAAACAGTGATTGTGAATTTATGTGAATTCAAATATAT GAAAAGTCTAATACCATACAccttttttaatttcgcttagcgtagactag taaactagtcgttgaaaacagacccatatacaaaaaatttaagctccaaa aaaaaaagaattgaagagatgaggttgcgtgtcttttctgaatttcaacg actagaagcttcttctctcaaaaaacgttgtttaattttacaaccttttt taggtttttgagaatccatccaacttttttgactaaatgatatttcatag taacattaaacatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNgaagtagcttctagtcggttattttccttttctctcacgcgcgctg aatatttaactagtgtttacattatttgattgacagttttattataaggt tataagtaatgaccgactagtttactagtctacgcTTAGcgaagtattac gatagcctttcgcggtggcggcggcggcggtgtcctcggaaaaaaaaatt agaaaacgaaagtactcgatacggtggacgaacttacTAAATTTAACTTA CACTTTACACGTTCGTTTagccacggacgattttcgcgcgTTTTTATAGT GGTCCGATAactgtggagataataaatTACATCAAGCCTTTTTTACGACT GTATTATTAGCTCCACAGTTTGGAGCGTACGGCTCCATAACTTTCTACAT TTTTGTAAGCATTCATCGTGAGAATTTTTTCAATCATTAATggctgcttt tgaaacttgctgctgctgtatcaatttttatcatgttttcttgccttttg tagagtatttaaagaggtttattattcgtttactactaagtattttatgt ttgtgtagttactgaatgcaccaataaattgataatgctcagtaagtagA ATAAAAAGAGTTACTTTTTCACAACATAAAACCCTGCCTCTTCTTCACTA AAACTACGAACAGCGCAGGtatgatatttttttccttttttcaccagata gtattgtgttaatagtgaaaccagttgtgacaaacagtcagctTTAGCAA GTATTCTTTAGAAGTTAATTGAAATTCAGCGATCATTTTCGTAatagaca gttagtcacactagcttcccgccaaaatgcatatcaaagattaatgctgt gaaagcgctatatcgtttacttgactctcaagccaaaaaatgcgccgcaa aacttctaaagggattcatgaaaaaataacccggcgctttttaatgaaaa taacattttcaaaaactttgagaaattgcctaaaattNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCAAAGCATGGggcgg caattcggccaccatttcaccaaacctccaaagtcatttgatttgagtta aggaacggcgtataaaaaaatacaggatttctctttcgattttacagtaa gtgaaaatacagaccagatatgcaacagtcccatgtttcggcCAATCGTC TCAAGTTAGAGCAGNtttgaatttcaaatgttttcttcttatatatttca acatttttgtgtACATGGGAGATGGGGGTGCCTAAAGATCAATTTTATTA ttacaaaaaattgattgataGTAAAACTTGAAGTATTGCTTTATATTTTT AGTTGGTTGCACATTAATGCTGATGATGTTGTTGGCTTTACCAATGTCTA TGGTCGTTATTGGTAAGGACAATGCTACCATTCAACTTTCTTATAGCTGT CACATGGCAATAAACGGACTTTAATTTATTTAACACGATGTCCATATTTA CCACGATCGACTACTACCTAAGATTTGAACGGAACATTCATTCCTTTTTT ATGGCCGAGGACATGTCTGTTTCAGTTGAAAGTTCATTAAGtctcaaaaa tctgaaaatcactggggaaaaaaaatttgtgccTGGAAGATGCCTTGTAG GCTATAAACTGTGATTGTTAAGGTTATGATATTGTCTTAATGTGAATTCA AATATATGAAAAATCTAAATACCATTGATATCTGAAATACCACGCCATAC CAAAGATAACTCAATATAAATATAGCCTATCGGCTATGGCTGTCAGTTTC AAAAGTTTccccactcttaaaaatatgttaTCAAAATTGTAATAACTTTA ATTTATTTCTATAGGAGTGTCATACAAAGATGTTTGTCCGATCGAACCAT TCATTCCAATCTATCTCATTGTCGGTGGATCATTCGGTATCGTCAAAATG CTCTCCATCATAATTCAGCGAATCACATATAACGGAGATATCTTTCAAAG CGATAAAAGCAACGAGGAGGAGCTTCCAATCGCATGGTTGTTCGTTGACG GCGTATTAAACTTGTTTTTATTCACGTGGTTCGTGGCGGGAAACATATGG GTGTATTCCAAATATAAACCAAATTACACGCCCCCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053505TCONS_00053505Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053505-proteinTCONS_00053505-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_232supercontigscaffold_232:100378..107063 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.34 0.29 0 0.21 0.5 0.4 5.48 4.94 0.84 0 3.31 2.01 2.08 1.95 4.14 8.82 1.84 4.16 0.25 0.83 1.56 3.27 2.4 3.88 2.16 3.47 0 0.27 1.11 2.02