XLOC_033520 (gene) - C. hemisphaerica

Overview
NameXLOC_033520
Unique NameXLOC_033520
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_225:200609..209717-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033520 ID=XLOC_033520|Name=XLOC_033520|organism=Clytia hemisphaerica|type=gene|length=9109bp|location=Sequence derived from alignment at scaffold_225:200609..209717- (Clytia hemisphaerica)
GAAATATTTCCCTTAGAAAGCTAAACAATGGATAATAGTGGTGGATATAC
GTTTAAGTTGGAATCTGGTGAAATTCCTGCTGAATACAAATGCTTGATTT
GTCATTTGTTAATAAGAAACGCAACAGAGCTTCCATGTTCACACGTTTTT
TGTGACCAATGTTTGTTAAAATGGGAAGAGAGACAACATGATATGAACAA
GTAAGTTTGTCAGGACTTTTCAAGGTTCTAAAATGTCTTTCGGTGTATTC
TTTATTCGAGTTTATATTGAATGTCTTTATTCGAGTTTATATTGAATGCC
AAAACAGAATACAAAAATATTTCCCCGCAGAAGTACTTGATGGATTTCCT
TTTAAAAATGCAAAGAAGTTTACTTTCTGAAATACAAAATGAAGAAAATT
TTTGTTGGAAATACAAAGTGAATTATTTTCTTCAAAAATTATTAGAAATG
GAATGTGAATTTTCTTTTAGAAATGAAAGAAATTTTTCTTAAGAAACTCT
TAAGAACTTACCTCACGAAATACTAAGTTATTGTTCGATAAAAATCAAGA
AAACAAAAATTTGTTCAATTTATTGTAAAAGCTTTTCGACTATCGTCATC
GTCAGTACAGTAAAAAATACATAAGCATATGAAAAAGTATCTACAATTTA
TAAAGAAAATGTTAAAAAGTTGAGAAATCACATCAATTGTCACGGGAGCA
ACGATGCCATGACGATTAATGTGTATTCTTTTGTTCCAGAGTAAAATAAT
TTACGTTATGCCGTTTCTAAATAAGTTTAATTGCTTAGTCTCTAGTTGAT
TGTTTAGTGAATGCTTTTTCGATGCGATTTGGAAAGCCTCTAAGTTTTTC
CTTTCTTTGCTCTTAAGTGGTGCCGAAATTAGAACCTTCCAGTTAAATAC
ATGACTATTATCATGACTCTCTAAATGTTTTGCGGGCTCCGAATTACCTT
TTAGCGAGTTGTGTTCACTCCAGCGAACTTCAACATTTCTAGCCGTTTCA
CCGATACTAAGTTATTCTTCCATCAAAAATACAAAGTTATATTCAATTAA
GAATAAAGTGAATTTCCTTCAGAAATACAAGGTGAATTTTTCATCCGAAT
GCAAGTTGAAATTTCCTTTAGAAGAATACGTAAATTTTCCTTTAGAAATG
CAAAGTACAAAGTTAATTCTCCTTCATAAATATTAAAATCAATTTTCATA
TATATGAAGAAAAAGTCAATTTTTCTTGAGAAATACATGGTAAATTTTCC
TTCAGAAATACAAAAACTCTTCCGATCCTGTTTCAATTTTTTAGGGATGC
CCCTTTAAGATGCTCACTATGCAACCAAGCTTACAACAATCAAACCGATG
TCAGGATAAGAAAGTTTATTTATTTTTTTCTAAACTAATTTTTTTATGTA
GAACAAACGATATAATGGTTGTCTTTTTAATTTCTTTCTTGCAAATCCTT
TAGCCTGGAGATCCAAGCTGTTTAAGTTTCTGCTGTTTACAGCTACCAAT
CAGTGCCGTAATATTTGCCCCAAAGGGGGATTTCCCTCACTATCTTAAAA
TCCTCGCCAGAGCACCAAAACTTTTTTAAATTCAGGAAAAAAACGTGAAA
ATACCCAAAATTGTCAATGTATTTCGGCACCCATTGTAGGTCTGGCTAGA
TGGTTGGAAGCCAAGTAAACTTTTCATCTTGGAGCAATCAAAAAATTGCA
GAGCTAATAGACTAACAAATTCTATGAAGCCACTCCGTCACCGAGACCTG
TCGAGAGAGGATATGTCTGTCAAACGGTATTACTTTGCACTTGAGGTTGT
ATTTCTACTATCAAGCATTTTCCTATTGCTTTTCTTCTCAAGAAACATCC
CTCTAAAGCATTGGATCGTATTATCAAAACCACATTAAATGTTCTATGCC
ACCAAAAAGAAAATGGTTGTGAATGGATTGGAAAGATTGTTGAATATAAG
GTCAGTAGAATGCCGGGACAAAGCCTCCCAAGGATTTATTTCAGTAATTC
ACGTCCGAGTCTAAAGACTTTTGTGTCAAAAGTTGATATAACAGGGGATT
GACAAATTTAGGGGAGTTGGATTTTAATAAGACAAATAAGAAGTGATATA
TAATTTTTAGGGCTCCAGGGTTATAAACAGAAAACGATTACTGTACGACG
CAGAGATAAGATTCTGAACCATCAATAGTGCATACTTTAAAAATTCATAA
ATCATCAACACTTTTATACACAGGATCATGCGCCTATATGTCAATTCGTC
AAAATAAATTGCAGTCTAGCGGGATGCAAGGAGAAAATAGAGAGAAGACA
TTTGCAAGAACATGAACAAAAATGTTGCCACCGTATTGTAAAATGTCCTC
ATTGTCAAATTGAACAAAAGTTCAAACATCTCGAGGTATTGAAGATTTTA
CACACATCCAAAAGTGCCACAAGCGATTAGCGTGAATAGTATACTATTCT
TACGTCTTTGTTGTTGATTGTAAATTATATTTGGTGTCATGAAGACTTTG
TCGCTATTTTTGCGTAATGGGTTTTTCCAAAAGTAGTCCGTGCCCCCTGT
TGAGGATATCGGATATCCAGGGGTTGAATATCTACATAGGAGCGGATATC
CATAGGGATTCAAGTAAAAAATACGATATCGATCCAGGGGTAAGCATCTT
TATAAGAGAGGATATCCAGGGGGTTCGATACTTCGAAAAATCAATATCCT
CAACAGTGGGGGTAAAATCTTTTTCTGGAAAAGCCCAATGGACCAATTTT
GGCAGTTTTCGTAATCGTAATGAAAGCATTCCCCATTGGTGTTCTATTTT
GGAATAGAAAGAATACTATATGAGGTGATGATGCAGGAATGTAATAGATT
TTAACCCATATCTGATGTGACCTGTATTTGCAACTCCTCTCAAATTACTT
CTCCAATTTAAAGTTTTTTGGATGTTGTTTTTAAGATGTTGTGTCTTTAT
CTTTTATATCACAGAGTCACCTAAACGTGTGTCCAGAAATGATGGTCGAT
TGTAAAAATCCTGAATGCCAAGTGCGCATGTTCAGAAAAGAGGTAAACAC
GATTCATTATAATCATTGGCATCCGGGGGGGGGGGCACTCGATCTGAAAA
CGACCATACGTTTGGCCCAAAATTTGGCTTCTAAAATCTGACCCTTACAG
TGCAGTGAATTTCCATTAAAAATCATACCCTTACAGTGTACTTTTTCAAA
ATTTCTCGCCCGTAAGGGCGAAAATGTTTGCAATTTTCCAAGAAAATGTG
GAATTTTTCCTCAAAAATTTACCAATTTTGTGTCAATTTTACCAAAAAAT
TGGCCTTTTATCACAATTTCCTACCCTTACAGTGCAGTTCAGTGCAGTTT
TGTAATTTCCTACCCTTACAGTGCACNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNCGAGCCACAACCTCATTTTCTGGCAGGCTCGTTGT
GGCTCGTTGTGCCATTTTCTGGCTCGTTGTGTGTTTTAGTATTACCCTTT
TGGAATCATTTTACTCTAGGATTCTAGTAAGTACTCTATAAAATTATCAT
GTATATAGTTTGTTAAAATTGAAGCATTCGTTGAAAAATAACAAACAAAA
TAACAATTGGGCACAATTAAAGCTAATCGTGGACTTTATATATAAAAATA
ACTCTCGATTTTTCTTAAAAATTAGTACTGAAAATGACTGGGATATTGCA
ATCTTCTGGACACTGATTAAAAGAGAGTTTCATGTTGTATATTTCAGGTA
CCACTTCATTTGAAAAATGAATGCCTATATGAACCAGTTAAATGCAAATT
CGCTTCACTTGGCTACACTGGGATGGTAAGACGTCAACAGCCTAACTTTG
AGTAAAACAGGATGTGCTAAAATGTTTAAGGTTAAAACGACTTCAATTTT
GCTGTAGTCTACACGATAGATAGTCACAGGCTTTAGGCCTTCCTATCCTG
AAGAGGAGTAGTTTTACGCTTGGAGCGAAGGCAGATATGACGTAGCTTAA
TTTTGCTAGAGCAAGAAAATGCAAAAACTGATTTGAGGAAATCTTCGTCA
TCTTTCCCCTCCTTGAAGTTGATCAAAAATATTTTTAGGGGGGGGACTTT
TTCAGTTTTAAGGTATATTGAATGCTTTTTTCTTCACAGATTCAATGGAT
GGACAAAAAAACACACGATCAAGAATTCGCAGCGATTCATAACAAAATGC
TTCTCGAAAAGCATATAGAGACTTCAAGGGAACTACAACAAACTCGAGAT
GAGATGAGAGACATGAAGTCAAAGATAAATTCCTTAAGTGGTTTCAAAGG
AAACCAAGCAGAAATAAGTGATGCTTACTCCCTGATTAAGGAAACTAAAG
CCGAGTTAATAGCCGTGAAAGCCGAGTTACAAAAAACGAAGACCGAGTTA
ACCTCGACAAAGATAGAACACTTGAAAACAAAGAATGAGCTTCAAGAAGT
TCGAATAGAGGTAGCAGATCTCAACAATCATTGCAATCAGCTTTACCAGC
TAGTCGAACATTCGTCTGAAATCGTGTGTAGCCATCTACTCAACGAAAAA
GAATCCGAAATTGTATTTGAAAACAAAAGTTTTGAAAATCTGGTACCCTT
ACTAGTTAAGAAGAATTACACGTTTTTTTTTTTTTAAGAAACACACTTTT
AAGAAACATGAGGCTCAGAATGTCTAAAAACTAAGAAACATCGAAGAAAC
ATGCTGAGCATGAGAATGAGAAAAAACATTCTTTAATTCGTTTTTTTTAA
GAACCTTCCAATCCAGCCTTTCATAAGGCTGATTATGTCAAAAAGTTTAG
AAACATGTAAGAAACATTTAAGNNNNNNNNNNNNNNNNNNNNNNTTATGT
CAAAAAGTTTAGAAACATGTAAGAAACATTTAAGGGTCAAAAGGCCGATT
TCTTAAGAAACATTGAGGCTGCTTGGTAAAACTAGTTTCTTAAAAAAAAA
AAAACGTGTATTTAGCATTGGCTAAATCACAGAATCTACACTATGATAAA
GCTGCTGCAGTCTTTGGCGAACAAGAATTCAAATTCAACAAACTGAATGT
GATTAATAATTTTTATCCTTACGAATACGTGTATAAAACACTTCTCTCCA
TCATGGATGTAGGGGATATTCACCAAAGATCAACAAATGAATTTTTTTTC
AAGTTCAATATCTTAGACTATGAATCAGTTTATGCTGATTTTGGAAATGT
TGAATTTCTAGCAAGTCGCCGAAAGTCAGGTGATGTAGCATATATAAATA
AGAACTTTTTATTGGTAGCTGAAAATTCGAACCGTTGTTCACTTCGCTTT
CAAATTGAAGGCTTCGATGAGGAAAATTCAAAACTATACATTTTAAATCC
GAAATGTTTCCAACGAAGGTTATTAATTTTTGATTGGAACGATAAAATAA
CAGAGAAAGATGATTCTGGCGAGGTCTTATTTTATTTAGTAAGAAATTGA
CACATTTTATTTTCAGTTTGCTATTTGAGGAGTTATGTATTTTGGAGTTC
ATCTAATGTTTCCAGCTCACCCAAATAGAGACTTTATACGCATGCGTGAT
TTTGCGTTCTTTTAAACTTTTAAACCACGTGTAATTCCCGTGATAAACAA
AGAGGAATGAATCTATAGGGGTCTTACAGTCACTTTCGGTCGGGGTGTGG
GTTGTGGAGGGCGATATATGTCGTTCTTTGATAGTTAGGGTTAGGGTTTG
TCCTTCTTTTTGTCGCTTTTTAATCTGAAAACGTTAGATGAACAGTCTCT
TTGTGCCACTGCATCAGAAGACATTCGCAAGGCTGCACACCGCAATTTTC
ATACTTCAATGTTAATTATGTTAAAAGAAACCAAAAAAATTATTATTGAA
ATCATAAAATTATGTAAAATATGCGAAAAACTATGGGTAACATTCAGATA
TGGATCCAGCATCTTTAAATTGATGAAATCAAATAACAAAAGCTTGGTCA
CCGACATTTTGAATTGTGTTATTACAAGTGCTTATAATTTTTTAATTTGT
TGATACTTCAAAAGTATTTTATTTTGTTAAATATTTCTGTTATGCGCAGT
TTTGTAATTTTTCTGCGCACTTTTGTAATACTGGGAAAAATTTGGTCGAT
TTTTTGTCAAAATTACTAATATGCACAGCTACGTGATGACAAAACTGCGC
AGAAATTATATTACTGCGCAAAAATTACAAAACTGTGCAAAAATTACAAT
ACTGATCATAACAATTTCTTACGAAACTGATTTTATTTCTTAAATATTTC
TTACAAACGACTTATTTAATTGAATTAAGAATATGAAAAATTATTACCTT
ACCGATTTTGGCGAGGAGAAAAAGTTGTAAAAAAATTAATTTGGTGAGAA
CTCTTGGCAAAACACAATTCTTTTATTTTGCCGAGAACTTAATTTTGACA
AGGATTTATTTCGGCAAGTAAATCAATTTTCAATCTTTGCGGGAGCTAAA
TTTAGCGAACGACGTAGTGAATCATTTTCCATTCGCCTTCGATGTAGTAA
GGAGCAAGTGTTCATTATTTAGCTTCCTTGTCTAAAGATCTGTACCTTTT
GATCCATAGCGAAGAAATAGTTAATTTATACCCTTTGTTATGAACAAAGA
AATGTCTCACAATTTCCAGAAAACTTAGCTCACGAAATACGAAGTTATTT
TTCCATCAAGAATATATAAAGTGAATTTCCTCCAGAAATACAAGGGGAAT
TTTTCATCCGATAAATACAAATTGAAATTTTCCTTTAAGAATACGTAAAT
TTTCCTTTAGAAATACAAAGTACAAAGTTAATTCTCCTTCATAAATATTA
AAATCGATTTTCATATACACACTTTTTTATAAGAATAATGTACTTTGGCT
GAGGGTGAGCATTATTCTTATTTTTCTATTGCTCTAAACAATAGGCCTAT
TGTTCTAACTCTGAAATCTCACTCTGATATTCTTATAGAAGTTATTCGTA
TAAAAGAAAGCGTGTATATGAAGAAAAAGTCAAATTTTCTTGAAAAAATA
CATACTAAATTTTCTTTCAGAAATACAAAAACTCTTCCGATCCCGTTTCA
ATTTTTTAGGGATGCCCCTTTAAGATGCTCACTATGCAACCAAGCTTACA
ACAATCAAACCGATGTCAGGATAAGAAAGTTTTTTTTTTCTAAACTAATT
CTTTATGTTTAACAAACGATACAATGGTTGCCTTATTATTTCTTTCTCGC
AAATTCTTTAGCCTGGGTATCCAAGCTGTTTAAGTTTCTGCTGTTTACAG
CTACTAATCCAGTGCAATAATAATTGTCCCAAAAGGGGAATTCCCTCACC
ATCTTAAAACTGCAAGTGATTTTAAAGTGCGTTTAAGTACGGTTGGAAAG
TAAAGTTGTAACTCTAAGTAAGTAGCCTAAGCCCGGGGTGAGGGTACTAC
CCTTGTCGACCGACGGGGGTGCTCCGCTGAGGTTCGAAAAATGGATCCTA
CGTGGGACTCGAAATTTGCGAAAAAAATGACCCTGAAATTCCAAAAATTT
CTAAAATTTTCTACTTTTTCCCCAAATTTTACAAAAATAGGCACTCTACG
AGGGACTTATTTTTCTATTTTGGTGTTTTTGCGACCCTACCTGGGATTCG
TGGAGGTTAAAAAAGGTACCCTGACCAGCGGAGTATCCCCGTAACCCATC
TTGCCCTAGTACCCCCCCCCCGGAGCCTAAGCCAGGTAGCCACGTCCCCT
CCTTAATCGGAAAAGTCAATGAAGCAAAGTGAAAGTACTAAATCGCAATC
CTCTCCAGGGCGCCAGAACAATTTTAAAATCAAGAAAAAAACGTGAAAAT
ACCCAAAATTGTCAATGTATTTCGGCACCCATTGTAGGTCTGGCTAGATG
GTTGCAAGCCAAGGAAACTTTTCATCTGTGAGCAATCAAAAATTGCAGAG
CTAATAGGCTGACAAATTCTATGAAGCCACTCCGTCACCGAGACCTGTCG
AGAGAGGACATGTTTGTCAAACGGTATATATGCTTTGCGCTTGAGATTGT
ATTTCTACTATCAAGCATTTTCCTATTGCTTTTCTTCTCAAGAAACATCC
CTCAAAAGCATTGGATCGTGTTATCAAAACCACATTAAATGTTCTATGCC
ACCAAAAAGAAAATGGTTGTGAATGGATTGGAAAGATTGTTGAATATAAG
GTCAGTAGCATGCCAGGACAAAGCCTCCCAAGTATTTATTTCAATAATTC
ACGTCCGAGTCTAAAGACTTTTGTGTCAAAAGTCGATATAACAGGGGATT
GACAAATTTAGGGGAGTTGGATTTTAATAAGACAAATAAGAAGTGGTATA
TAATTTTTAGGGCTCCAGGGTTATAAACAGAAAACGATTACTGTACGACG
CAGGGATAATAAGATTCTGAACCATCAATAGTGCATACTTTAAAAATTCA
TAAATCATCAACACTTTTACACACAGGATCATGCGCCTATATGTCAATTC
GTCAAAATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053078TCONS_00053078Clytia hemisphaericatranscript
TCONS_00053076TCONS_00053076Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053078-proteinTCONS_00053078-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_225supercontigscaffold_225:200609..209717 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0.13	0	0	0.11	3.47	2.9	3.94	3.75	1.43	1.46	2.68	1.41	0.76	1.12	0.54	1.31	2.93	0.76	3.46	5.04	1.58	1.25