TCONS_00053078-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053078-protein
Unique NameTCONS_00053078-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length135

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053078-protein ID=TCONS_00053078-protein|Name=TCONS_00053078-protein|organism=Clytia hemisphaerica|type=polypeptide|length=135bp
MDNSGGYTFKLESGEIPAEYKCLICHLLIRNATELPCSHVFCDQCLLKWE
ERQHDMNKDAPLRCSLCNQAYNNQTDKHPSKALDRIIKTTLNVLCHQKEN
GCEWIGKIVEYKDHAPICQFVKINCSLAGCKEKIE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033520XLOC_033520Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053078TCONS_00053078Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
IPR008974TRAF-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 22..67
e-value: 0.0015
score: 27.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 22..68
score: 10.896
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 21..69
e-value: 0.00849088
score: 30.4916
NoneNo IPR availablePFAMPF13923zf-C3HC4_2coord: 21..51
e-value: 1.5E-6
score: 27.8
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 10..79
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 93..135
e-value: 2.3E-10
score: 40.0
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 7..92
e-value: 1.9E-13
score: 49.6
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 37..46
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 91..133

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053078-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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