XLOC_033031 (gene) - C. hemisphaerica

Overview
NameXLOC_033031
Unique NameXLOC_033031
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_211:101558..106268-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033031 ID=XLOC_033031|Name=XLOC_033031|organism=Clytia hemisphaerica|type=gene|length=4711bp|location=Sequence derived from alignment at scaffold_211:101558..106268- (Clytia hemisphaerica)
ATAATTTTTAGCCTCACAATTTCGGGGTAGGCCTGGGCAGGCTGAAGACT TCAAAAATGGTCCGATTTGGTTAAAATTGGTTACAATTTTACAATTGGCC TACAAATGATTTAAAAACACTGAAGTTGAGCCCCAGTGCGGTTCTAGCAC GTTCAACAGTAATTGATATTTCCTAAATTAATACAGACAGAATATAAATA AAACAATGCCAAGAAAAGGAGACAAACGAAAAAGGCGATCCGATGATGAA TCTTCATCAGGAGCAAGCACTTCAAAAAATGCTAAAAATACCAAGAAAGG TAAGAAAGTGATTGAAAAATGACCTGATTACAGTGTTCAAACTTCTATCG TCTCAGAAGGATTTCTTTCTTAGTGAAGGAAATAAAGAGGTATTTCCGTT TCAAAATTGTGTATAATTCATCAAAATTTCAAGATTATGTGCTAAATTGC TACCTTAAAGGAAGAAATTTTGGCGGGAATTTAATTTGGCGTTTAATGAA AAATTTATCCTTAAAATGGCGTGAAAACAGCTAAAAAAATGCAAAGACAC CTTAAAAGAGATCATATTTTCAAAAAGTTTAATTTGGCGGAAGGCGTAAA AAAGAAATTTTAGCGGGAACTTAATTTGGCGGATCCTGGCCAAATCTGTC AAATCTGCCAAATCCGCCAAATTTTCTTTCCGCCAAAATTTCTTCCTTTA AGGTATGTAAAATCTGTTTTCTGTCTCAGACCAATAACCTCGATTTGATC ACTGTCATTACCACTAATTGTTTAACCCATTTATCCTGGGGTTACTTTTG CGGCTTACAATCACCAATGGATTTGATTACATTTTCAAGGATTTCATAAG GGAAAGTAACTCCACTCTTTAAAATTTCACTCGCATTTTTATTTATGATT TGGAGTATTGACAGTGGAGGCTAGTATAAAAATGGAATATAATTCGTATT ATAATTTTGTGGTTTTTTTATGTTAAGTTCTTTATGTTGAACAAAAAATG ACTGGTATTGGTAATAAAATCACTGTTTTAAAATAACTGTCTCCTTTCGA TTCATCTTGAAACATTTTTGACATTATCAAGTTCAATCAAGTTTTATACT CTTTTAAAATATCTTAAAATATTAAAAAAATCTTATAGCTCTTGGATTAT GATTATTCCCATTTACTTTTCACAATCATCTGCCATTGCTTTAAATTAGT TTTCTTTATATTTGAATTATACTGAATTATATATAGAAAAAAAGTAAAAC TGTGATATCATATACCGCTCTGTAAATTACAGTATTGAGTACTGTTGAAT TTTTTTAAAGTCAGTTGTACAATTATATTTGAATTATTTGATACTTCTTA CTTCTCGCAGAAGAGACTCCAGCCATAGAAGAGGTGACAACCATCCCTGC GGTGTTCACCAAATCTGGCAAAGTATTAGCTTTTGGACAAGGAGATGTTG GACAGCTTGGTCTCGGTGATGAGGTTTTGGAGAGGAAACGACCAGCTCTG GTTAAAGAAGTGGATGACATCAAATTTATACAATCAGTATGCGGTGGAAT GCATACTGTTATCTTGACTGAGGATGGAGAGGTTTGTGTTTTGTAGTAAC TTGTTCAAGTCCTTAACATGATCCTTTCTTATTTGTCTAATACATTCCAT AATGGACACCCCTTAAAAACTAGGGGGTTCGACTTTTTGGGAAATCTTTT TGGAAAAAAGGATGGTTTGATTTTGGGTAACGTTTGGAAAAATATTTTTC CGTTTGTCAACCTTGTTTGATTGATTTTTGACATTTTCTTAAAGCAGCAG AAAACTCTATAGTTTGATTGATTTTTAGATATCGAGGCAGTATGGGAGTT GAGCATATAGGAGTTAAGCATATATTTTTGAGGGGGCAGTTGAAACCCCT GTACCCACTATAAATTCGTATCTTTAACCCATCATGTATCTTGGGAGAGG GTCTCGAGGCTTTGGTGTATATTTTGGCATGATTATTGACGTTTTGACAT AGAAAATGATCTCTTTTTAGTCGTGCCCTTTCTGATAGCGATGGATTTAT ATACAAAACTTAGTACATTCAATTCTATTATAGGTCTACACTTTTGGGTG TAATGATGAAGGGGCACTGGGACGAGCCACCAGCGGTACAGATGATGAAG AATATTATGCAAGAAAAGTTGCTCTCCCCGACGGTGTCAAAATTATACAA GTTTCTGCTGGTGACAGTCATACTGCTGCCTTGTCAGATAAAGGAGAAGT TTATGCTTGGGGAGCATACAGGGTAAGAAATTTTTTTTAGACCTAGCTGG AGCCCATAGAAATTCTTTGATTTTTTGCACTAAGATACAAAATGGTATAT AATGCCCAAAATGTGACTGTCCCGGAAATATTTTCAATTATTCAATTTTT ACAATCAGGTAGGCCCATACAAGTATCACTTGTTTTTGCACAGTTTTGTG TATTTTTCCTTAGGTTAATTTAGGAAGTATAACTAATTCGTTAAAGTGTT TATTCATATCTTTAGTTTCAATTGAAAATTCCTACATATAGTATGCTGTG ACCCCTGCTCCGTTATATTGAGGCCTTTTTTATTGTGGGGCCTTTTAAAA AACATTATCATCTTTAATTTTTCTTTCTCTAGGATGCCAGTGGTCAAATG GGTCTAACAGCAGCTTCTCTTGGCAAGAAGAACGAGATTAGAAAGATATA CCCAAAAGGTGATGAAATAGAGGACCCAGCGATCAAAGTAGCTTCTGGTA ACGATCATACTGTCATTCTAACAAAAGATGGTTCGATATACACGAATGGA ACCGGTGAACAAGGCCAATTGGGTAGATTAAAGGAATGTTTTGGACATCG TGGTGGTCGACGTGGTTTAGATTTTCTTTTATCGCCACAATTGGTTCGTT TTCGACGGAAAGTGAGATTCTCAGACATTTTCACTGGCAGCTTTTGCACT TTCGCCCTAAGTAGCGACACAAACGATGTCTACGCTTGGGGTCTGAATAA TTATGGACAGTTAGGCTCTGGCACAAATGATAATTATTTCAACCCGAAAG TTATAAAGCCTTTAACGGAAATACGGAACCAATCGAAGTCCAATCAGATG GTGATCCAAGGTGGTCAACACCATTCCATAATGGTGGATGGAGAAGGTAT TGTTTATAGTTTTGGTCGCGCAGAATATGGTAGACTAGGACTTGGAACAG ATGCAAAGGAAACTGCGGTACCTGTCAAAGTTCCAAAACTAGCAGATAAA AAAGTCAAAGATGTTGCGTGTGGGGAATCAGTTAGTTATGCTGTAACCGA GAAAGGCCAATTATATTCATGGGGTTTTGGAACCACACTGCAGTTAGGTG TTGGCGATGATGATGATATTTACGAGCCAGAGCTGGTCAAATCGAAAAAT CTTGATCCTGAAACCGATGAAGTTTTAACCATATCTGGTGGTGGTCAGCA CGTTTCCTTAGTTGTCTGTAAAAAAGAAAACACGGCGAATGGACATGAAA GTTAACTATTGTTTTTTTAACCTTTTTGGTATTACGTGAAAATGGTGGAG CAAGATCTTCAATGCAACCTCGACTGCGACGAGTTTTTGGCTATACGTTT ATCATCTTGAATAGCGGGTTAAAAAGTTGAGATCTTCTGAATACTGTAAT GTCTTCAAAGATGGAGACAGATGGAGTATCTATCTTTATCGCTTTTAAAT CTGTATAGGGTAATCGCGTCATCAGATGTTGATATTCTTTCACATTTTCT ACTATTGTAAGGAAAGCAAGGAACTTTTCCATTGACATGCATCATTATTT ATACTGATACATTTTAAAAGAATTCTCTAGTATATTGAGGATGAATTTTA GGTTAACACTATTTTAAACTTAAAAAATTCAATGACATTTGTTTTCATGA TATAACAATCATTATGCGAATTCTCTTGGAGTAAAGTTAAGACTTTTGAA AGATTCGAATTTTGCAAGGGTTTCTACTATTTTTTTTCAAGGTGGTTTTT AACAGAAGTGATTTTATCTTTACTTGAATAAAGTATTATTAATTGTATGA TGAGTAATGAAAGAAATAATTAATTTTGTTCTTCTTTTTAATCATGTTAT ATAGTAACAGTCTTTGTAATCTCTTTAAGGAATTTATGTCACTGACCTTT ATAAACTCTGGACCAAACTATATCCGCCATATTTGATCGGAGATTTTTTG ACAGTGGTACCCGCAAAAAAAACATTATAGTGTCAAAACTTTGAGGTGCT ACCTCACTTGTATGCAAACGAAGTAGATCTAGCGCTCTCAATGCGGGTAC CACTTTGAAAAAACTTCCGATCGAAAGATCTTGTTTGACCGGGATCGAGA AACTGCCTCCAGGGTCTATATAAAGCTCTGTGATTTTGTGATGTACATTA TTTGTCCATCTATTCTTTCGATACATGAAAGGTATTCGACTTTTTAGGGA GTTCTGTACAGCCATTCTCTTTTCCATACCCTGGATAAAACTTTATCCGC CATCTTTCATCAGAGTTTTTTGAGAAGTGGTTCAATTAATACTTCAATGA AATAATTTTCCCTTTGAAAAATATTTTTAGACCCACATCGAGTACTTTAA TGGGGAATTTGGAAAGGCTTAATATTTCTAAACAAAACTCAAAAAATGTC AAATAAATACTTTTTGAATGTTTACTGGCATCAAAGAGACGCTCATAATG CGTATTTCAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052166TCONS_00052166Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052166-proteinTCONS_00052166-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_211supercontigscaffold_211:101558..106268 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RCC1regulator of chromosome condensation isoform a Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
84.31 79.99 235.97 247.61 68.9 54.06 41.24 44.26 30.31 32.97 22.16 18.19 16.2 16.64 21.82 24.33 34.23 28.43 8.96 12.93 21.29 22.11 46.45 38.12 20.8 24.98 31.03 27.32 43.41 45.95