XLOC_027845 (gene) - C. hemisphaerica

Overview
NameXLOC_027845
Unique NameXLOC_027845
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0005152:883..4681+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027845 ID=XLOC_027845|Name=XLOC_027845|organism=Clytia hemisphaerica|type=gene|length=3799bp|location=Sequence derived from alignment at sc0005152:883..4681+ (Clytia hemisphaerica)
TGCTCCTTTTGACATCAATGACTCGGCTATTCAGCCTGACATAGAAGAGA
TGAATTTCAGTCAAacagaggtttgtttttttatcagtTATGGTTCCTTT
GAAACGGATTAATAATTTCTGTAAGCTTTTGAAGCAGTGCCAAATTTACC
TCAAGCCTCTGTGACGCCACAGGGCCGTTAGAAGTACTACATCGTCTTTC
AAGAGCTTTGTTATGGTACAAGTTTTTACGGGtttatttgtaatttttct
caatttttggggGTTTAAAGATTTGCCTTGGGAATGAGTAAAACGGCCGA
ATCTCGAATCTCACtccagtcctcagtttagtAGTTGGCTACTGATTTGG
GGTCGTTGCGCTTTTCCCGTGTTGGCACAATATGGTAAGTCCCTGGAATG
ATGATATGAATTAATAGGATTAAGGTATGCAGATTTTTAGCTCTAATCTA
ATTTGTAACCTACCTTTATTTCAGGATGAAGTGTCAGATTCGGAGTCAGA
ATCGGAATTCGACGATGACGTCAAAGACCAGAACTACGAACCTTCTGACG
AATCTGAAGAATGCCAAAGCGACGAATATGAAAGTGATGaatattcaatt
caaaatatTAACGAGGTAACCtaatgtacacatttttttNNNNNNNNNNN
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NNNNNNTATCTCTTATAGTGCCCTAAAATTCCATTCGTATAGGTGACCGA
ATTAaactaattttgaaattttcatttccgTTCATCAAatcattactttt
tgttttatttccaaACAAAGTTGATGTGACTTCAATTTTATAGGAAAGGA
ATACAATTTCGGATTCATATATATTTGATGGGTCAAATATTGAGGACGGA
AGCAACGATCAAGAAATAGGTAACaggcatggcgttctaaattaaTGTTA
TGGTAACGGGTCTCTTTTTTTTGAAGTGGGCAAATATTTGATGATGTCTT
TGCCCTTCTTTGAACACTAGTAAATTTATAGAGACATAATCCAAAATGCT
TACAGTAACTTTCAGGCAGCTCCAATTTTGATTAACGAATCCTTTCACGT
TGGATTTTGGGTGATGCTATagtaaaaatatgttttgtgaCTTTTTCCTA
TAGGTTGACTGCTATAAAGTACCTTTTTAGCCAGTTTATTTATTAGAAAA
TATCATGTTTTTTAGTTGTGAATATCCCAAGGAGCAGAAAGACGAAGGAA
GGCAAACGCATCTATGACAAGGTGCAATACTGTTTGTATTGTCAAGGTGA
AGTTGGCAATATAGGAAGACATCTCAGAAGTTGCAAGAAGGCAGACAAAA
GCGTAATTAAGCCGTTATTAGACCCTGACACGAGCAAGACAGAAAAAGAC
AAACTATATCTTGAGTTACGTGGACGCGGCAATTTTTATCACAACATAAA
GGTAATACAACGTTGTAGATTTACCAAGGCGGCTACTGTGAAAAATGTTT
ACtttaatgtcagaaatttttgcgtccagaaaatttcgcgagtcagTCAG
TCCATTCgtgttttaattttcgcgaaattagaattttttagaCAGAAACA
CTGGTAAAGTAAATAGGATCTCTGTCCTAATAGTGAATTTAGTTAAACTG
GTGTATAATTTTAGACCTTCCCTCCAGTTTCACCAAAGGTGGTTGCAACA
CTGATTAAAGTATTTTCATTGCtatcaaaattaagttttaatgTGTTTAG
ATTTCTGAAGTTTCTGAAACAGCTCATTTCCTCAGAAAAAAGACAGGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00044199TCONS_00044199Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00044199-proteinTCONS_00044199-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005152supercontigsc0005152:883..4681 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.91	0.99	0.49	1.01	9.61	9.54	2.48	3.1	1.9	4.36	1.79	1.89	0.82	1.11	0.67	1.05	2.17	1.81	0.63	0.24	0.73	1.21	0.49	0.61	3.34	3.44	0.07	0	0	0