XLOC_027770 (gene) - C. hemisphaerica

Overview
NameXLOC_027770
Unique NameXLOC_027770
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0005003:235..4545+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027770 ID=XLOC_027770|Name=XLOC_027770|organism=Clytia hemisphaerica|type=gene|length=4311bp|location=Sequence derived from alignment at sc0005003:235..4545+ (Clytia hemisphaerica)
GCTTTATGCAGTGGACTATAGGCTGCTATAGGTCTGTAAAATTGACGAAG
TTAACAACATTGCGtgcatttttttgttgttgttcagTTGCTGGTTAGTG
GTTAGTAGAATATGTATGCAAGTAACTGTGGCTTGTATTCttgaaaagtt
ttggaaactTCAATCTATAAAGAAGAAGGTAGGTAGACACTTTTTAGCCT
TCATTTGTATATGGCTTGAAATTTGATTTGAGAAGAATGTGAGGCTGGTT
AATATTTTCTTGGCCTTGCTTTGTTTTAGCTAATGCTAATCTGTTCCATT
ctctccaaaaaaaattttctctagcTGCTGGCTTTAGTTCATTGATAGAG
TGAAGCAATCAATACCTAATAAGCATATCAATGGATTATATTTCATTTTA
CTGATAAATCCCACCTAGCATAACACTAGCTAACACACCATGCATATAAC
TTTTTATAATAAGTCTCTAGCATCTCCAAAGTCTcttctaattttaaatt
ttttgcctgCTGTGCTACCGTGAGATCAAGTAACTTGCaccagtggaggc
taacatgcatagccctcaaataaataacctggctggtcattaagatacaa
agttaaatcaaaacaaaaatggtagagtagagctgcaagcggagctgcgt
agttaatttttttttaaattttaaattttgctgcttttgaTTGGTCGGTT
ATTTGAtagctatgcaagtttccctccactgatgcaagttacccagcTTC
ACGGTGCTTTATACACCCAATGATATACTGTgggattgggtaacttgcat
cagtggaggccaACATGCAAAGtaagccctcaaatgaaagacctggctgg
tcattaaattaaatacaactacgcagctctgctcgcagctccgctcgcag
ctctactctaccatttttgttttgatttaattttgtattttgattaaacc
caatctcacggtactcaGGTCGGGGTGGGgtactaaattttcaaaaatta
cgagGGTCTCTATGACAGTCTAGAAAGTAATGCATGTATATGATAGATAT
ATATATCCGGCATAGACTTTGTATCTCACAGGCTTAGCCCAAAGTTATGC
TCAAAAAACCATCTGGTGCATGTTTCcttattttaaaagatttatgCAAA
AAGAGGAGAAAACTGAATAAATGCACTGCTTCTagtcaatttttccaaat
caaatTGTCATGCGTGCAGtggcaatatttttcaatattttttcttcgtc
aAATGACAccgacaaaaaaattaaaaaattgagattaCAGTAAATAAAGT
ATTGAgaaagtagaattttttttaaaattttagtaAGAACCAAATATANA
GGGGGGGGGCTATTTTTGTACCAACCAAAAACTTTTGGTAATAACTCATG
AAATATAAAAGCTATGTCAACGAAATTTTGTGAGTTTTCCTAAATTTTAT
ATAGCATCAATATAAAACACATTTCATCCCCTTATTAtcttcacaccttg
agcatgatgacaagCAGGTGTCAAAAAGATATGGCACATTTTTTGCGTAA
TTGCccttttaatgtcaaatatatatatatcatttaaatacaaattttat
gaataatttaaagaaaaaggtcatTTTTATCTATTAATTCTTTTCTGTAC
TGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatccaa
cgattcacgatgcgcgatgcacgatccatgcatatattatgttaattatt
ctaattatgcacgaataagttttcataatactagctacaaacatcatata
acaataacgaaaaaaaaattaaaaaaagaagggaaaataatttatcataa
tcagaatgattaaaataactttatatcttctgtgtagaaaaaccaaaaat
tgatagtgagagaaagaaaatgttcgcCGCATGCCTCACTCGtttataaa
atgaaagaaaaagccttgacgtcatagaaaagttttggcgcgGAAAATTT
ATTACTTTTGATGATCAAGTCaattcatttgatctttctcaaaaaatgtg
agtttatacacgcgctcttcattaaaaaacgtcttccctactttaccaca
acattataaatttttgtttataaccctgtctcaatccaatgcatttggtt
ggtttaatcggagaaacgtttttttttttaagaaagaaagcaaaaaggtt
acaagatattcaattcaaggcatgggcaaaaaagtttatgttttgatttg
atttgagtgtcgaggttaaaatatatacacgcatgctttacattgatttt
ccaggaatacaaaagaaggaattaagatatgtgattactaaaacctgtaa
atccataattagaataattaacataatatatgcatggatcgtgcatcgtg
catcgtgaatcgttggatcgcgcatcgtgaattaCACAAACCGGGATCAG
AAGTTAAAAATTAGTTAAAAAATCATGCACACTCTATTACACTCAGACCC
TAGAATACTAGTGAATTTCAGCTTAATTGTAAGGTTTTCAAACTTCTGCA
TTTGTACACAGATTGattgtaaataaatagaaatATTGTTACAGGTTATT
AGCAATTCTTTATTCAATGCTTTCCAGATAATATACAGTGATAAGAAAAA
CGTTAGCTATATTGTTATCAAGCAAAAATGTCATTTCAACAAGAGAggta
attttttagtttttctttactttttggcTAATTGGTTAAACATGTTTAAA
GCATACAGTAATGCCCAATTTTGCAAGAATGGTTAAGTTTAGTGAGCCAA
GCCGAGTGCTTTTTATTAAAGAAATGCTACATTACCATGTAAATAGTGAC
TAGGTTGAATCTTTGACAGGGTTTCATAAAAGACTTTTGAGATtgaaatt
cttgatattttgatttctttatattctaatttttcaattttttttaattt
ttaaaataagaaaagctgtcttatttttagaatttctatGGCATTATAGT
TGGTCTTCTGATGGAATTATTTTTAGGGTGACCATATTTTTCGTATCCTA
TTCCTGTTAGCAAAAGAGATAAAGAGAAGAAATTAGCTTGAAAATACTTA
TCATCAAAACCAGTTAATTTGCTGGATAGGGAGAGGAACTTTTCTTtgca
attataaattataaagaTTATTTTGTACTGTATAGTTAGAAAGTGCACTT
TAATCCAATCGATCcaatatatatttcaaaaattctaaaagaagAAAGGT
GAAATTTTGGATTAcataaataattttcaaattatgtaatttttaatttt
ccaaacctgtgaatgaAATTTAGCAGGCGAGTtatactgaaaaaaaattt
tcacccgTCTGGTAACACAGAAACAAGGAATTTTTTAGGAACGACTTTAA
AGAAGATCTGAATATTATTTCTGATATTTATCCTTGTAGTATATTCCAAC
TGCCTGATCCATATTCAATCATTGAAGTCCCAGGTGACGGGCATTGTATT
TTCTATTCATGGGAGATATCACTGACAGCATCTTCAACAAGCAAGTTCAA
ACCCACATATACATCTCTTTTGGATCTGGTGCGTATGGAATTCCTAACGA
ATCAAGACAACTACAAGCCGTTTTTCTTTGGACAAAAAGATTATAATGAT
GAAATCAAGCAGACACTTGAGAATAAAAGTTACGCAAACTGTATTTCTGA
TATGATGGCTAACGCCTTATCAAATACAACTAAAACAACTGCAGTTGTTT
GGGAGAAAGAGAATGGTCAGCTGGTTCAACGGAACGTAATCATTCCAGCC
TTAGACGCAAATCCAGTAAATGGAATCATTCACCTACACAAAGAAGGGCA
GCATTTTGAACCTATTGTCAAGAGACAACAAAAAGGTATGCACTTTTCAT
TCTTGATTTTATAACATTTAGTTTCTCTCATATGTTCTATAGGGGGACAG
TTTTTCCCAACACtttatttttgtctgaaaacattataaaaaaatatcca
aaaaaacaaataaagcttaacaaattttgaaaaacaattctCATTTGGGA
TTTTATGATTCCAAGTATTTTCCTCAGTGGAtacataaaatcaaaaatct
gcAATTCTTCCACCTGTGATGTCATATATGACGTGTAACAAAGCAGAACA
AAGATTGAAGTCTGTTTATAAgagtttattaaaaaaaaagagttgaataG
TGCAGAAGTTAAGAAGGCAATCTTATATCTTCTCTGTTTAGAAATCTCAG
ACGCTTTGTCTAGCACACATGGCCTTTCATTACAGCAAACCCAAGCTTTA
TCCTCAATACG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00044123TCONS_00044123Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00044123-proteinTCONS_00044123-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005003supercontigsc0005003:235..4545 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.76	1	0.83	0.32	3.85	3.66	3.76	4.23	2.96	3.28	2.37	2.92	2.43	2.32	3.36	3.52	3.62	2.31	2.64	2.36	4.31	2.79	1.26	2.36	1.26	2.66	1.1	0.86	0.73	0.58