XLOC_027754 (gene) - C. hemisphaerica

Overview
NameXLOC_027754
Unique NameXLOC_027754
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0004977:121..3985-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027754 ID=XLOC_027754|Name=XLOC_027754|organism=Clytia hemisphaerica|type=gene|length=3865bp|location=Sequence derived from alignment at sc0004977:121..3985- (Clytia hemisphaerica)
CTGTTTGACGTGTGTGTAAGCTATGGTTATCTGGTATCGAGTAATTTAAC AAATTCGTGTAGTACATTCTAGAGCCACAAACAAAAAACACACATATAAA GATCATCATAGTTTCAATGAAATATGTACCGAAAGTCTTTGGTTGTCCAT CTTTTATACTTCTTGGTAATATTACTGACTGTTGGAAAAGTTGATGCTCA GCAAAAAAGTAAGTACTGATTCTCAAGAGCAGGATATTATCTTGAGTGGT TCTGGGTGAGGGTAACCATGTTGCAAGGTGACCGGTACAAGCCGCCTGCT TTTCACCCATGGATCATAGCGAGACTAAGAAGGAAGAAAAAAATAAGATA AGCTTTGTGAATTTCACGATCCTTAGGGACTGATTTTTCCACATTTCTAT TTGATCGATATGAATTTTCCTATTTTTCAGATCTTTTCAGAGAAACTAAA GTCTATTCACGATAAGTGTGCACTCTTTTTTCTTTTACTACCTATAACTT TTGAAGGAATTCGTCAATCTTTACAAATTTGGTGTCATTGAAAAGATATT AGTGAGTGGAACAATTTGAAATAAAAAAATCTTCTAAAAAATTCTGAAAA TGAAGATGAAAATGAAGAAGAAAAAAACAGAGATCATGTAGAAAAGTGCT ATAACTATCATTTTCACTGAAGCGAAACCTTGATTATCGAACGTCATCAC TGTGAAAAAATTTCTCAAAAATAATCATTCAATCAAAAGATATCAAACAA AGTTATAAGCTAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNATCACTTATTAACTTTGTATCATAACTTTGTATTGAATAAATAT TTTAGTGAAATTTCTTCACAGTGATGACCTCCAAAGATCAAAAAATCCCT CAAGTGAAATTGAAAGTTATAGCACTTTTCTACAAGATCTTCGTTTTTTC TTCTTCATTTTCATCTTCATTTTTAGAATTTTTTTGAAGCTTTTTTTATT TTAAATTGTCCCAATCACAAATATCTCTCCAACGATACCAAATTTATAAA GATTGAAGAATTCCTTCAAAAGTTATAGGTAAAAGAAAAAAGAGTGCACA CTTATCGTGAATAGACTTTAACATTTAATATTCCTATTTATCGGACCTCT AGAAGGACCCAAAAAGGTACCCTTAAGGAAGGGTGCCATATACCCGTACC TTCACTTGCTTAGGTAACACTCGGGGCGTTTCCATATGTTAAACAGGGTT TACCATATAAGATTGATTCAGAATTAGACTCTTAACCTTTTCAGCCCGTC GGACGAGTATAGTCGTCGAGCATACGTTCCGGCGNCTTAATGGACAGCTC GATACAGCTCGATCAAATTTTTATAGAGTTTTTTTAAACAAGAAAATAAT GTTTGACCTGCTAGAGTTTATTTTTAAGTTTTTATCAAGTTATGAGAAGT TCGACCAAACATTTCATAGACTTGCTACTTTTGCTATTAACATTCTTTTG AATATCTATATTTGTCAAGTCTGTATTCATTAGTTCTAACAGAGATGTTA AAACAACACTTTTTCTATCTTGAACGAAACTGGCGCTAAACTGTCTTTAC CTGGTTGATCATCAATCGATTAAATTTCGTCATGTGAGTGTAGTAAGAAG AAATTTGTAAATTATAAGCGGAGCTTATCTTAAGTTATTTCTAATCTTCC ATGATGAACCAGAACATTCACTACACGGCCGCTTCCTAAATCGCACAACT ATCCATTAAACCTTTTAGGGCTTTTAAAACGGCTTTTAGGGGTGGTTCAG AACTAGGGGGGGGGGGCTTTTCCTGTACCACCCCTTAACTTTTGATCTAG TATGTCTTTTTGGATGAAATTTGGCACACAAGATCCTTGTGACGTAAGGT AACTTTTGACAAATTTTTTTTTGATGACGTCACTCATCATGCCCAAAGTG AGCAAAATCCAAAAATGTCCTTTGTTCTTATAAATAGCTATTGTATTCTA ACAAAGGCTTTAGAAAAAAGTTGCCCGAGTTTAAAATGCTTATTTTTATC CTAAATATTCAATAAATTACGGTTTAAACGATATATTTTACATTGAAAAT AAATTTGTATTGGGAAAGTATCAATTTTTGTGACACCTTTTTGTCAGAAA TGCCATCATGCTCAAGGTGTGAAAATATTTAGGTGTCAAATTTTTTTTAT TTTGAAGCTAAATAAAAGTTAGGAATTTACAGAAAATTTCATGGCAAAAG CTCTATTATTTAAGGAGCTATTACCAATAGTTTGACCTCCGAACAGAAAG AGCCCCCCCCTAGGCCGAATAGGGTTAAGAAGGGATGGCGAGTGGTCGAG CGCCTTCTCTGAATCCTAAATAGCTAAGAATGTGAATTTCGCAGTAGCTT GTTACAGTGAGATTTCCCCTATAATGAAGTTATTTCAATCTTTTGAACCT CTGATAACTTTAGTTTAAGCGGGATTTGCAATCTTATCAATCTTAACTTT AAAGTTAAAATTTCATTGGCCTTCTATGAAGAATTTCGTTTAGTTGATAA AAGAGCTCAAAGCTATAAAAGAGAAATAGTATTGAAAGTTATGGCATGTT TTTTAGGATTTTGATTCAAGTTCAATTTTCTTCTAGCTTGCAGATTATCA GGTATTTGTACGTACACATGTCAATTAAATGAAGATTGTTTCTTCAGAGC ATGCACAGCCTCGATGGTCACATTCAAGTGCCAATCAGGTAAGACTTAAA GATTGTCTAAGAGTTTAAGAGNATGGAAATTTTATACCTAGTAAGTCGAT TTAGTCTATATTTTTGCTTTCTAAAACTGTTATCAGAAAAATTACCTGAT AATCTTAAAACTTTTGCGCCGCTAGTCTTACTTTACTTTCCATTAATGAT CATGGCTGAAAGAGCCCCCAAAAATGCAGAAGTTGGGAAGAAGGGTTCGT GCAAATTTTGGCGCCGCAGGCAAAAATCTTTGGTGTCAGAAAGGTCAAAC AGCTTAAAAGATCTTCTAAAACGTTAGTCAGTATAAGACCCCAAAAACCA CAGCGAGAATCAACAAGTTTTGATCATTTTGGCAATCTCTCATTTTAGGG GTGAAAATTTGTAACTAGGGGAAAGTGAGCAATAAATTTGTTCGAGTTTG CTAAATAATGTTAAATTTCTCTTCTTGCAACAAGACTTAGATGTCGAATG AAACAACAGCCGCCATCTTGGGTATCCATCAAAACTGACTTTCGTATCCG TCAAAGAAACATTTCTAGCGGTCGCAGAAGAGCACTCTCATACACCCAAT TCATAAGGGCGACACATTCTCTTTAACCCCTGGTGGATACACAACACTTC TCTTACTTCTGATTCAATATTGATAGAAGTTTAGAAAAAATTCAAGAGAA AGGATGCAAGAGGTTAAATTAAAAAAAAATTATCATTGTACTCATAGAAG GCGCTATAAACGTGCCGAAGGGCGCCAAATTGCCTAGTTAAACATCGACA AAATTTTGGCGCCCCCTTGAAAAGCTCTTTTGGCGCCCCTCTCAGATCTT TCTGGGTGGTGCACTGCACACCCTGCACCCCCTGCCAGGCCGCCACTGGT TNNNNNNNTTTTGGCGCCCCCTTGAAAAGCTCTTTTGGCGCCCCTCTCAG ATCTTTCTGGGTGGTGCACTGCACACCCTGCACCCCCTGCCAGGCCGCCA CTGATTGAAAGTTATGGCATGTTTTTTAGGATTTTGATTCAAGTTCAATT TTCTTCTAGCTTGCAGATTATCAGGTATTTGTACGTACACATGTCAATTA AATGAAGATTGTTTCTTCAGAGCATGCACAGCCTCGATAGTCACATTCAA GTGCCAATCAGGTAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00044107TCONS_00044107Clytia hemisphaericatranscript
TCONS_00044106TCONS_00044106Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004977supercontigsc0004977:121..3985 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.38 0 1.37 1.08 1.3 0.81 0 0.35 0 0 7.86 5.83 0.77 2.26 1.27 3.38 18.67 24.05 8.07 11.15 1.94 2.11 5.08 8.42 0.46 0 0 0.38