XLOC_027708 (gene) - C. hemisphaerica

Overview
NameXLOC_027708
Unique NameXLOC_027708
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0004893:47..5077-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027708 ID=XLOC_027708|Name=XLOC_027708|organism=Clytia hemisphaerica|type=gene|length=5031bp|location=Sequence derived from alignment at sc0004893:47..5077- (Clytia hemisphaerica)
CACACTTATCTTCAAGCGCCGTTTTGAATATCTTTTAGATGAGTATTACT TTAGTGATGTCAAAGTGAATTGGTTTGAGGCTGAGCGATTATGTATTGCT CGTGGAGGAACTCTGGCAACAATTCTTTCTCAAGAAGAAGACAACTTTAT GCTTGATCAACTGACCAAAAGGTTTGTTTTTCTGTTAAAGTAGACTAGTA GACTGTTAATTAATCATGTCAGTGGATGGAAATTTAAGAGCATGTAGTAT TCAGGGCCCAAGCAACGGGGGGCGGGGATGCATTATNACCAAAAGGTTTG TTTTTCTGTTAAAGTAGACTAGTAGACTGTTAATTAATCATGTCAGTGGA TGGAAATTTAAGTGCGTGTAGTATTCAGGGCCCAAGCAACGGGGGGCGGG GGTGCATTACTTTTTTCAAACAAAATTCTATTTTTAAAATATTACGGTAT ATACTTTCAATAGCCACGTTTCTGGGCAAGGTCAAGCTGAAATAGTGTCA TTTCAAGGCATATTAGAAAAATGCAAAATTTTCTCCCGTCCTTTGCAAAC CCGTTGCGCCTAATTAGTCACCATATTTTTTGCTCATCCACTTTCAAGAT TATAACGTTGGCACTGCAGATGCTTGCTAAAATACGATTGGGGTTGGAGA GCGGAAAATGTTGATGAGAGGGTGCTGGTCAACCTCACCTGCTAACAAAT TTACTACTTTCGCTTTATTAACTCGTACGCTCACTTTTTATGAGTGACAT CTTTCCAAACTGGCGTACCAGTCTATAATCAAAAGTGTAACACTCAGATT TCTAAGAGTATGTCAACTTTTCTTTTTTACCTTTTTTAGGAAACCATCAA ATGAAAGAACAATTAATTATTGGTTAGATGGCGTTAAGAGGAATATGAAA TATGTTTGGAATGATGGATCAGAGATGATTTATAAAAATCTTGGTGGTGG CAGAGCAGATGAAAGTAGTTACACTGAAGGATGTGTTTTAGTCATGTATG GACCGGGTTTTCTTGTTCCCGAGCCTTACTCTTGGTTGAAAGTTTCTTGT ACGAATGATGGATACCCAATACAATACGTTTGCAAAGGAAAAAATCTCAA TGGTTAGTAATACAATGACCTAAACTTTATACTTTGTATTTTTTCATACA TCGAAGGGGAGTGGAGGGGAGGCTGCAACAATATCATTTCAATAAAAATC ATTCCAAAAATATTCTGATACTTGACCTAATGGACACTCATATTTGCCAT AAGGATATGGAACATTGTCAAAAATTTTTCAATACCCATTGACATTATAT TTTTCACCCCCTTTGTGAAATTTTTTCTAGAAGAGCCAATTTTTCAATTT TTCTCACGATAAATAGGGGAATAAATAGATCTTACAAGTAGATCTTTTTT CAACATTAGATTCGCCTTCCATTACGACCGCAGCCACCACGACGCCTACC CCCAAACCTTTACAATCCTTGGTGACTTGGGGCTCGAGTAAGTATTTAAT ACATAAAACCTGATCATTCAAATTCATTGTAAAGCCAATATGGTATCAGG CAAAATTCAATTAATTGGTTAAATGGTCAGAATGCTTCGGAACATATATC TAAAGAATTTAGCAGTTGTACAGTTTTGATAAATTTTAAGTCTCAGGCTT TTTTAGCATCTAAGTACATTCAAATTTCATTGGAGGTTGTTATGTCTTCA GACTTAAGTTACAGCGATTTGCTAGTCTAGACACACTTATCTTCAAGTGC CGTTTTGNTTTTGATAAATTTTAAGTCTCAGGCTTTCTTAGCATCTAAGT ACATTCAAATTTCATTGGAGGTTGTTATGTCTTCAGACTTATTTTACAGC GATTTGCTAGTCTAGACACACTTATCTTCAAGCGCCGTTTTGAATATCTT TTAGATGAGTATTACTTTAGTGATGTCAAAGTGAATTGGTTTGAGGCTGA GCGATTATGTATTGCTCGTGGAGGAACTCTGGCAACAATTCTTTCTCAAG AAGAAGACAACTTTATGCTTGATCAACTGACCAAAAGGTTTGTTTTTCTG TTAAAGTAGACTAGTAGACTGTTAATTAATCATGTCAGTGGATGGAAATT TAAGTGCGTGTAGTATTCAGGGCCCAAGCAACGGGGGGCGGGGGTGCATT ACTTTTTTCAAACAAAATTCTATTTTTAAAATATTACGGTATATACTTTC AATAGCCACGTTTCTGGGCAAGGTCAAGCTGAAATAGTGTCATTTCAAGG CATATTAGAAAAATGCAAAATTTTCTCCCGTCCTTTGCAAACCCGTTGCG CCTAATTAGTCACCATATTTTTTGCTCATCCACTTTCAAGATTATAACGT TGGCACTGCAGATGTTTGCTAAAATACGATTGGGGTTGGAGAGCGGAAAA TGTTGGTGAGAGGGTGCTGGTCAACCTCACCTGCTAACAAATTTACTACT TTCGCTTTATTAACTCGTACGCTCACTTTTTATTAGTGACATCTTTCCAA ACTGGCGTACCAGTCTATAATCAAAAGTGTAACACTCAGATTTCTAAGGG TATGTCAACTTTTCTTTCTTACCTTTTTTAGGAAACCATCAAATGAAAGA ACAATTAGTTATTGGTTAGATGGCGTTAAGAGGAATATGAAATATGTTTG GAATGATGGATCAGAGATGATTTATAAAAATCTTGGTGGTGGCAGAGCAG ATGAAAGTAGTTACACTGAAGGATGTGTTTTAGTCATGTATGGACCGGGT TTTCTTGTTCCCGAGCCTTACTCTTGGTTGAAAGTTTCTTGTACGAATGA TGGATACCCAATACAATACGTTTGCAAAGGAAAAAATCTCAATGGTTAGT AATGGAACAATCCTAATTATATGTCCCAATATTTTTATTTTCTATCTAGT TATATACCCAGTTACATCAGGCTCCCAATTTGTGCAACTGTGTTAGCAAA ATAGTTCTGGCGGCCATCCTAGACTAAGCCCTAACGGGTTGGTACGGGTT GTCCCGGGCGAAGTTATTCTATCTACTTTTCAATTGAAACTCAAAACATA TGATCTCCCAAATTAATAATTGGTTGTGGCCGATACGAACAAACTACATA ATACTTTTCTGACCAACAACTTTTTTTGATCTAGTAGTAGCCGCAACAGG AAGGTAGATTATCCAGTTTAATATAAAACTGTATTTGATGCCTCTGTGCT TGATGCTTATCCAAGTAACAAAGAGAAGATCCAAGGGTCACTGGGGGAAA ATCCAGGGAAAGAAGTGGCCTTTTCCCCTACATTTGGGTCGACAGCTAGA GGAAAGGGAGTCTCCGGTTTGCGTTCGACTGCAATTGAAAACTAATTCTG TTTGATATTTCATTAGATTCGCCTACAATTACGACAACAACCACGGTCGC ACCAACCACACCATCAGAATCTTTGCCATCCTTGGTGACTTGGGGAGCAA GTAAGTAAAAGACATTTTTATCAGGAAGAGACAAAACTTACCTACCTTCC TTTATACATATGCTTGATTTGAATTGAACTTCTAATTTCAATTTAATTTC TTTTGTGTCATTTTAGTGCAATATTTCTTCAGCGATGAAAAACTGAACTG GTCAGAATCGCAACAAAAATGTACTGATCTTGGAGGAACCCTTGCAACAA TCTTCTCACAAGACGAAGACGATTTTATTCGTGGCCAGTTGCGCGATAGG TCTGTATAACCTTAATATGTTGCAAGGGAGAGGGTACTCTTGCAAAATTA GGCTCTTGGTATTTGTGGATCTTCACTATTGCTAGAGGATAGAGAAAAAA AATAGAAAATAGTCTTACAAAGAATTGATGTTTCACTGTTTTTGTCTCTC TAAAGGGTCACTTTTTCGTAAATTATTTTACATGTGACTTATGACCAGTA TAAAATTTCATACTATACACAAATTTACAATAGAAAATCACCATCTGACC GTTCTATCAACTACTGGCTTGATGGTGTCAAAAAGGATATGAAATATGTA TGGAACGATGGCCTTGAGATGATTTACACCAATTTAAGATCAGGAAGAAC AAACGAAAACAGCTTTAAAGAAGGATGTGTTTCTGTTGGTTATTCACCGA CCGGTACCATCCCTGTATACTCTTGGTGGACCAATGATTGTGCAGATAAA AGATTCCCATATCAATACATTTGTAAAGGAGAAGATTTAGGTAGGCAAAT TTATGTCAATAATAGTGAAAAAATATCTGCATAATAGACCTTAAATGTAT TAATTTTGGTGTGTCCTTGATTTGGCGGTTGGTCAAATTGCGATTTTTGG CGGATGGGTTGATTTTAGACATCAAGAGCTACTTGATATTTTAACAGCTT TTACTCTAAAATGCTAATTTCATATAGATCCTTAAAAGTTTTTGTTAATT TGGGCGGGTACTGTATTTAATTTGGCGGATTTTACCCAAAACAACCATAT CCGCCAAAATTAATACACTTAGGCAGGTCTTTTCTAAATTATTTTAGTGC AACTGCCTCGATCTGAAACAACTAAAGTGATTGAATCCTTTGTAAAAGCA AGTGTATCTCTGTAAATACACCTACTCGACTGTAGCCACCAATTACCGTC CAAGTCTATTTTTCCCACCTATAGACGATAGAAAAAGGTGTAAAAAAAGG ATTGGATCGAGTTTAGGGGGATAATTAAATAATAAAGTGGCACGCGCCTG ACTGCGCGACTACGGTTAAAAGGTGTATAGAGTAAACTTCTTATGAACTC TTGTGGGAAGCAATTACCTTATTTCATATCTTTTTCTACTCCCTAAGGGT CGAGTTTTGGTTTCTGGCTCACTCGTACCTGAGAGCCTAACCTGACGACG TATTGTCATAATTCTCTTACGTGTACGGTAAACCTTTGGGAGCTTCACCG TGGTGTGCAGAAACAATGACTATCTGATCTCAGGTTAGCCTCATCTAAAC GATAAAGCTATTTATGTTTTTTTATTTCTATCTTTATAGAAAAACCATCA AAAAGCGCTGTTTTGAAATTTTTGGAAAGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00044056TCONS_00044056Clytia hemisphaericatranscript
TCONS_00044055TCONS_00044055Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00044056-proteinTCONS_00044056-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004893supercontigsc0004893:47..5077 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.75 1.39 0.42 0 0.13 0.21 0.58 0.97 0.72 2.31 1.4 0.56 0.39 1.54 0.98 0.53 1.32 0.5 8.92 3.89 0.44 0.55 1.04 1.44 0.42 0.44 0.3 0.14 0.32 0.52