XLOC_027148 (gene) - C. hemisphaerica

Overview
NameXLOC_027148
Unique NameXLOC_027148
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0004234:151..3522+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027148 ID=XLOC_027148|Name=XLOC_027148|organism=Clytia hemisphaerica|type=gene|length=3372bp|location=Sequence derived from alignment at sc0004234:151..3522+ (Clytia hemisphaerica)
ATTTGGTATGCCGTCTTAATTATTCATATGAATGATAACAAACTTAAATC
AGTGAAAATACTTTCTGTTCAAATTACTATCTAGAGCATTAAAGAATTAG
CAGATGTGAAATTCATCCCATCTCTGAATGGAAACTTGTACAAATGGAAC
GGGGAAAGACTTGAGGTAGTTCTCCTTGTTCTGTCAACCAATTCTTTGCC
TTGAAAACAACACTTTTCAATTGTACAACTACTTATTGTAAATCAAGAAA
TATAGGTAACTAACAGTAGCGTGGTGGTTTGACCAAAATTGAGGCAAACT
GGTGAGGCAATTTTTTTAAGTTGGGATTTTGGCACCCGGGCTATCAAAAG
TAGAATATGTTTGTAAAACTTACACAAGCTAAGCAAGCATGAAAATTTAg
gggtatttttttctaattttgactGTAAACTGCTATTTCTAAGGCGTAAA
AAATTAAAGGGATATGCTGAAATTCGTAATCAGCCATACTCTTTTCTTCC
CCTTGTCTTTCAGCAAAACCCACAAATAAATTAGCCCCTGTTGGGCACTG
CTGGGGGGCCACcagccgtatgcgcagcgtcgcacgctgcgtctcccaat
ccagtgaatcactacacatctaaaaaattctaaaggaagaaaaatagccg
ccgattgatgatttgattttggttttaggaaataaaggacaaaaaagata
acattgcattgcaatttttaaccacaattaaataaatgacttagcaaaag
tatattttagatcttcttagccatcgtggctggccatcgtggttggacat
tcgagggtgactttgaaagactttgaaaagatTTGAAAGTGATTGGGAGC
CGCTATTGTATACAGAAAGtaaaagagcatctgaataagaattctttaaa
atgacaaaaaaatttgtgaagaagattgattttaacccatcaagctccaa
acttggtgaatagaaaatagtatcttggggtctcaaagttagtctagtgg
taggaaatctgcttaaggtgcaaaaagattatggttcaacgccatgaaga
ggaggctctgtagagctttgttaaattttcggaaaatttttacaaaacgt
tgtaaaccaCCACACTACTGGTAATTAATACAAATATTCAAGACCAAATC
AAGACAATCACATCTGAGAATGCTCCCAAAGGGCGATTAGCCCAAGAACA
TTTTCTTAATTGCCTCTCTCTGGTAATATAAAGCACAAGACTGGGCAAAA
TTATCCCTGAGTAATCTCTTTTAAATGATTTTATAGGAGGTGAATTGTTC
TTCGAAATGGATGTATGTGATTTATAATATAGTGTGCTATATATTGTTAA
AATCGTAAcctattatttttgttttagactGTACCTCTTTCAGCAGATTA
TCTACTTGGAAATATCAAAAGACTACCAGATGGTAGTTATATTGTTGGTG
GGCAGGAAGTATCCATCAGTGGTATTGATGTTAATACTGGAGAGGTAGGT
CAATTAAATCACCTATATGTATGTTACATCGTCTCTAGGCCAGTAGCATT
TATTCTATAGTTTACGCAAGTTTAGGAGATAATTATTTTGTAAGGATTTA
ATGTAAAAGATTGagttttataaaagaaaacccCAATTTACTTTGAGAAA
CTGAGCTAAACACAAACTGACATCTATTTGAAAATCATTAACTGTTCATT
TTCTCAGCTTTCATATGACTGTACATTGAAAGGATGTAAGCCAGTGAAGA
AATACTCTAACACAATCAAACACAAGGATATTATCTCGTTGCGAAGAACA
CAGAAAACCATCCGTGTTTTTGAGCCACAGAGTGGACAAGAAAAGTAAGT
CTTGGAAAGGATAATGATTAAGGGAAGACGAGTCCTCTAGATTTGTTACT
TATCATACTGATCATTACCCTTTCTATCTTTTGATTAACAACCAATatgt
attaaaaaaaatgaatattgtGATTAAAAGAGACGACATTAAAATTCTTC
TGTATACGAATGTTGTTGTGGATTTCATGTCGGTATTACCCAACAATATT
TCAAACCAAACATTCAGTCTCATAGATAAATATTTACCaagttctttttc
ttcattcagGTGGAATTATTCTGTCGGAAATTTTGACATCGAACTGGTAG
AAGGTGAGAGTGGGGATGTATTGGATTCATATTGTGGTGAAGATGGTGAA
TCTACCAATGATCAATATAGTTTTGTCATGCAGGATGGTGTTGTTGCCAG
TGAAGAATGGACATTCCATTTCACATCACCCATTGCAAGTGCATGGAAAC
TGGAAGATAAACAACTGAAACCgttgaatgttttcaattcAGATCAACTT
CAACTTGGAGAGAATATCAACACGCAATCTTTAGTTTATTTAGGTATCTA
TTGGACTGTGTTTTTTTATTGAGTTCTCCAGGAGCGAATGATGCCAAATT
TAGATCAGTCCTATCTGGAAACTAACCCAGTTTCCACATGTTGTAGATTC
GATAGGTGTATTTTGTAAACAGTCTGACGATCtcatttgacattttgaaa
gaagaaaaccgaatgtttttgcttcaaaaCAACTACCTTCCTTTAAAACA
TATTAACATTTCAGGACTTTACAAAGGTCAAATGTATGTTCAACATCCGA
AcgagaaagagaagaaagattcgaaaagcAACCTTTTCTCAGAAAAATTA
TCTTTGGACGTACCACAGATAGGTCATTGGAGACCTCTGGTTGCCACTTC
TCCTTCCAGAACTCCTTTCATCAACTATGATCGTGGAGATTCGACAGCAT
TAAGCTCCATTGATTACCCTTTCGGTAAGTATAGGTTTCAAATTCTAATC
TCAAACCAATTTCTTATCTTCAGTAAAAATTTTGCACTAGTTGAAGAATT
GAAATTTAAGAGTAAAAGTCaggttttctttgattttatttttgaaattt
tgaattaaaagtATTACTTAAAGCTTTTAAAAATCTTAgatgagaaaaat
gaagcaatttcaccgACAAGAACAATTTTGATGGTTTCTTTACCGTCTGA
CTGCCTCAAGATGAANTAAAGTATTActtaaatcttttaaaaatcttaga
tgagaaaaatgaagcaatttcaccgACAAGAACAATTTTGATGGTTTCTT
TACCGTCTGACTGCCTCAAGATGAATATAATTAGTCATACCTGCCGAACC
CGGTGCATCCTGTCCGTCTATACTTACCTCTATTTAATATTGTTTTAGAC
AATGGAATCTTTTTATATTCCAACACAACGGCTGTAAGTTTATCATCCAA
CAACAAAGAAAACGAAGAAGGATATTGCAGTTCAGAGAATCCTGATGTTT
GCAATGCAGATAACCAGAGTGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00043452TCONS_00043452Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00043452-proteinTCONS_00043452-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004234supercontigsc0004234:151..3522 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.4	1.66	2.79	2.02	8.61	6.94	14.75	16.3	8.25	12.42	6.98	7.17	9.08	5.46	4.84	4.88	5.74	7.36	5.53	6.83	7.45	7.62	3.94	6.49	13.84	13.92	5.39	4.41	2.25	2.58