XLOC_027004 (gene) - C. hemisphaerica

Overview
NameXLOC_027004
Unique NameXLOC_027004
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0004099:3550..8301+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027004 ID=XLOC_027004|Name=XLOC_027004|organism=Clytia hemisphaerica|type=gene|length=4752bp|location=Sequence derived from alignment at sc0004099:3550..8301+ (Clytia hemisphaerica)
CTGGCGAAGGTGTCCTGGTCATTAAACGGAGACCCGGTGACAACGAAGAG CGGCGACCTTCAAGCGACTATGGTGTCTGTAAATTTTGTCTTGGTTTTTT TGTTTCGTCGGAGCTATGGCGCCACTTGCGATCATGCCCTCAAAAAATCC AATTTGATGGCTGCGATGAAACAGCATCCCACCATTCGGATCTGATCATC TTTGGGAGCAAGAAAACCCCCTTACCGGCCTCAGTTGAGTTTAACCATCT GTTGGAAAAATTGCGAAGTGACGAGATTGGCAATTTTGTACGTAATGATG GACTGCTTGTACGATACGGCGAATCACTGATGTACAGGAAGGGTGCCGAA AAGCCTCAAAATATCCTTCAAAATCTGCGTTTGATTGCCCGACTTGCGAT ATCAATGAATTCAACGTGTAAATCAAATTCTTCTTGCCTGGACCTTTTTA TCCCAAGTAATTTCGACCTGATTATAGAAACCACTCGTGAACTGGCAGGC TATAAGGCAACAAACGACGATGGGGAACTTCTCCCCACTTATTCTGTAGC GTCACTTCCTTTGAAAATGGGGTATGCATTGGACGCCATCTTTTCGTTAA TTCTCGGAATTGGACTGCGAGAAAGTAACGATACAATAATCATGAATGCA AGAAACCTTGCTAGCTTGTACACCAGCGAATGGCCAGTCAAGATGTCATC TGCAGCTCTACGAACGCTTGCTGACAATCGGTATGTCTTTCATTTTCACC TTCTTTTGATCGCGCTGAAGTTTTTGACCTTGTCAAATGTCTTATATTGT TCACaaatttttgaataacaaattaacCTTTGATcttctaaatttttttg acttcatGCTGATGGTGAAGATAACCAAGGTGCAAAATAAAAGCTTCTTC TTGTTTCCCTGTTCTGACGAAAACATGGTCTGTTTCTGTTCTTCATTCGT TTTTATACATATCGAAGTTCGTTatagattttacaaatttttgaagGCTT TTGAACTAATATTATTTTAGTTTCAACAAGATAAATGTTCTACCAACAAC AGAAGACCTACTTATGGTAAAGGAATTTACCATGACACAAATACCGGTGC TCACCGAACAGCTGCTCTCAAATTGCACAGTCGACAATTGGAGAGAGTTG GCAGAAACCCTGATAACTCGACTGACTATCTTCAACAAACGCAGAAGCGA TGAATgctcatcaattttgttaacaAGGTAAGCTTACCAACAAAATTGGA TATAATTTCCTTACCttaataaaattcattttcaaaacacaaattaaTAA GCTACTACAGGATCGGTACacttcttttataagcatagtgTTTATAGGGG CCTTTATAAGCATACTCAGGCTCAAATATTGGAAAAACAAAACCCGGAAC CTAAGCATTGCATAAGCATTATGCTGAGCCTCAATTTACAAATTTCGAAG CATTTAATctcccaaattacaccaaaaacGTGCATACTGTATAAATTGCA CcaaacgaggctcaaaaatttaattttgctaAGTATAATAGGCTCAAAAA AGTTTAccctatgcttataaaaaaatgcgtGCGGagcatttcacaaaaaa atatactGTATACCTTAATGGAATAAACTttcacggggattaaatttcgt gaattgggcttttccagaaaatgtctgTACATTGGGGttgaggatatatt gtccggggagtagcgaaaaatcatcaaaatttgccttgtccgggggtagt ttGGGTTGACCAGGGGTCAGCTGTTGCTTGTCCGGGGGATATaacccgtt gtccgggggggcaatagtcactttgtccgggggtaaatcactgaaaatcg ttatatcctccaccccccccatATACAATTGTATTATTGTGAGGCAATAC TTTTACGATTATGTGCCTTTTTACTGCCAAACTATGCATATGTTGGTTGT TGAAGTACAAATTATTAACGCTTCTTTGATTCcaagtaccttaaaggaag aaattttggcggaaagaaaatttggcggatttggcggatttagccaaaat ccgccaaattaagttcccgccaaaatttatttNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNcctccatccgccaaattaaattcccgccaaatttaatttat ttcacgcattccccaAATTCatgctatttcaagccttaaaacaggttttt ttgcttatttaaaaacgtttttggccaaaattatcctgcaaccgccaaat taaattcccgtcaaatttaatttatccagctatccgccaaattaaattcc ctctgaaaaaactttttcggccatccgccaaattaaattcccgcaaaaat ttcttcctttaaggtagttcTGAGTATTATTCTTTTCTAGATACAACAAT CGTCTCGAAAAATCTGAGGTTCACGATGACATCCTTGAATCGTTAACGCC AACTGAAAAGAAGCTTGTTGAGAGGTAATTATATCCATGATTTTGCGTCA TTATTAGATTCGCTGAGGTATTTTGTATTGGAACCGGGGTTGCAAATATT TTCATCACTTTAAAGAGGGTCCGTTGAAAACGTTGGGAACCCCATTTGGC ACCCAAATTTGGGTACCTATTTGGATGCCTCTTATCTTGGGAATCAACTG TAAGAAATTGTTTCAACCTGATTCATCACGTTCTACGAGTCAAATAGACA AAGAAACACCAGAAAAGTAATAGAAAATAGCTCCCATAAAGAAAAAAGAG CAAATtctattttgctgatttcgcgTCATTTCGATCACGTGACTTACCAC TTAACATTACTTTGCGGACCCATAATAGTATAGTAGTAGACAGTCGtcgt aaaaaaaatttgtgtaGCAGAATTGATAGAGTAAAAATTACTGTTACACA CTTAGTAGATTTGATAGATACCTGGGGATTGGTAAATACactttcctttt ttataagcatatttagTCTCGAATTCGCAAAGAATTAAGCTCGAAGCTGG GAATTAATGAGACAGGGAAGTAGACAAAGAATATTTGAACTTAAACACAT TGAATGATgtaaaatatgtcaaaaattatTGTGTTGACTATACACCTTTA ATGAGAATGAAAATGAGTCAAAATTGacgatgttttgaaaaaagctttag TAAGCACAAGCATAAGCATAATTTGTGGCTAAAAAtgagatacatgtttt ttttttataagcaagtgtatgccccttggtcaggctcgtgtatgcttaag ttctcaaagcatccaggcatagtttatgcttattatatgcttaagaatca tgctaATGATTCacccccgagccaagtttttaatgaaatttcagaaattt tgtaaaaatttgttcagattttgggagcagtggaatgtagctagccgtgg aatgtcttattttttacttgacctctaccaaaccttttttaaacagataa aaatgaccacttgaaaaatattttaggctgacaaatatgctcatgttatg cttaggaattctgcaaatctgagccttcatatgcttataagcgttatgct tataaaaaaaaaaacatgtagtgtaATAAACTGTTTATCGCAACATTTAA TCGCTTCTTTACTGTCCAATACTTTCGGCAAAGCCTCGCCCAATATCTTT TCTTGCACACCCAATCTTTTTGTATATGGGATTCGACTTTGACCAATAAC TATTTAATATATAACTTCCCCAAAATTAACCTCACTGAACAAATTTCTGG ACAATTGAGCATGTTCTTTTTGGCGTTACGTCACAAAAGAGAATTTTGTA CATTCAAGGACAACTACcaagaattttttgcataaCTCGATTGATGAACT TATAAATTCGTTTATTTagacgcagtctcatccaatatgaaaaatattag gcaaagcccattgagtttaaagcccgaagggctagagttcaatctctaac ctttctccggcaagaaaaagtgaagccttgaaaaatgcgccgcatttttg acgacagattgaatctagcaattcctttgtttacgattgatatttttttc gagatttagcggtaaattttagtttcaatctgtcatttgtgtaaaaacca ggcgagccgctcaaggccgcgcaactctagccttcggcttctacttcatt ggcaaagcctcgtccaatatctttCCTCGCACGCCCGATATTTCTCTATA TTGCAATTCCGGAAACAAACCGTTTGCCCTCTTCTGTTGAATTTATCTCA AAACTAAATATAATCGACTCTTTAGAAGAGCAATCAAAAACACCAATTTT AcgaatattttgaaatacagcCCAGGAAAAAAGTGGATAAAGAAAAACGC TAACGAGTAAGGAAAACACTATCAAATGAAAAGTTAAAAGACAAGTTCTT TTCTTCTCTCGGAAAGAAAGAAAACTTCAACCTGATTTAAAAGCTTAGTT TCGGGGGCTTTTTTACACCAATCAGTACTCATGCCACGTATGGATATTTC ACATTTCTGATCACCTTTAAATGAAGCTAGAATGCGTTTGTTACTTTTTA GGCTTGAGTTGGTTCATGNTATCACCTTTAAATGAAGCTAGAATGCGTTT GTTACTTTTTAGGCTTGAGTTGGTTCATGTAAGGGGCAAAAGAGGTAGAC AAGTTCCCGTCATTTTGCCGGATGGCATCTCCGAGGCAATAGATGTGCTT AT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00043296TCONS_00043296Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00043296-proteinTCONS_00043296-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004099supercontigsc0004099:3550..8301 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.04 0.04 0 0.05 0 0 0.09 0 0.08 0 0.05 0.03 0.11 0 0.1 0 0.03 0.13 0 0 0 0 0.04 0.13 0 0 0.12 0 0