XLOC_026848 (gene) - C. hemisphaerica

Overview
NameXLOC_026848
Unique NameXLOC_026848
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003928:1417..8446+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026848 ID=XLOC_026848|Name=XLOC_026848|organism=Clytia hemisphaerica|type=gene|length=7030bp|location=Sequence derived from alignment at sc0003928:1417..8446+ (Clytia hemisphaerica)
aaattcgaaacaaaaaaatcacgagtgcaattttcgaattgtacgagtta ttatgtgattacgagctaatcgcacaatggctttcactacNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNtctctttatgtctttcttttattgtt gtttattgattttctttctcacaaaataaatttcgaatgcaattaaaacg ttcgatgcaaaaaattgtaagaaaaaacattaaaatcaattttgtaaaca ttagcGCAGCATTGGagaattaattgctctctaaaggatacaattaacga ttaattgctctctttgagggcgtgccaaataagaaaaaataacccatcgt gcgattacaGTACTTAATAACATTTTGGCTCAGCTAGCAGATGTAGGAAA CAATTATAACAAAAACTGTTAGTATCCCATTTTGTTGCAAACttatactt gctgttaaaatttctttcaagttATAATCTTTCTTAATAACCTTGTTATA ATAAAGAATTAGTATATCAGTGCATTCTCAAGGTTTACAAAGTTGCAGat gattttattggaaagagaAGACGTTTGCCAGGAAAGCTAAACAATACCaa cttgtgaaaaattattaccAAGCTGCTTAGAAAATCAATGATCGTTGCAA ATTTTCCCTGTTTCTTAGACGACTCTAAAAGTTGTGAATAgagcaatctt tgaaaaaactgaTAATGAATTAAAGCTCATTGCCATTGGCAGATATTGCA TTTCCTTGTCAAGTTGTTTTTGAAATTCTCCATTCTCCATTCTCAGTGAA CTAGAGGATCAAGCCAAAACAACAATCAAgccaaagatttttttctttca tttaatTGATAACAATCATTTTAAGGGTGGTATTGTTGATGGGACATCTT TAGTACACCCAccacaacaaaagaaatttgatcGTGTCTTTGATGATGTG TCACAAACAATCAAGTGGGAGCCACCAACACATGAAGTCAACCCATGGCT GTCCAAGGAACAACTGGAAGATGCTGAATTAGtttgttgattttatttaa ctCAAACCAGCTCAAACCTTTATTCAATACTTTCAGCCTATTTGTTtcgt tttgattgtttttggttttttttgttGATAGTTTTATTTACCTCGTAAAA ATGATGAACTACAGAGATATCAAGACTACTATAGTtcataaaaactagat tgttgCATTGGAATAATCATTCCATGCCCTAGTATCTCTAGAAAAGTACT TTGGACCAAAACTTTACATACTTAACCTTACTTAACCCCTTAATATTACT ACATTATACCAAAATTAGAGGACATACTGAAAAGCTTCTAAAAGGCGAAC ACTTACTAGTTAGCCAACACTAACCCTACTCCCAGATGGTGTCctctaat tagaggttccactgaaTAGTTTTTTTGATCAACCTCTCAATCAAATGTTA ATTTGCGTCAAGAACAGTTTGAATTGGAATGCTGTACATCTCTAGCATCA CTTATCTTATACCAAAATTAGAGCACATAattgaaaagtttctaaaaggc ggacacttctaatcaGCCGACAATTCTAATTAGCCGACACTATAACCCTA CTCCGCAATGGTGTCCTCTAATTGAAAGTTCCGCTGTATAGATTTTTTGA TCAATCTCTCAATCAAATGTTGAAGGTTCCGCTGTATAGATTTTTTGATC AATCTCTCAATCAAATGTTAATTTGAATCGAGCAGATTGAATTGGTAATG TAGTTGTTGCTAATGTTGTTCTTACTCTGAAAACAACTTCCTTGCTGACT TGTTAGCATGCAGCAGTTTCTAGTTTAACTATTCTCTATTCTACTCATAC CCTTAACTCTACTCTACTCTACTCTAATAATTGTTAACTTTTACTATTTC TAAATGTGTCTATTTAAAGCCCCCACCTCTGGACAACCAACAACTTTACG ACGAGTTCCAAACCAAATTTGAGGATGAAAACTTTAAGAATTTTTTGGAG CAACGCAAAAGTTTGCCAGTGTACAATCACAAGAAAACAGTTGTGGATCA CATCAAACAAAATCAAGTGGTCATCATTAGAGGAGAAACAGGGTGTGGGA AAACTACACAGGTATGCATTGGCACTTACCCTGTATCGCTTTAATAAATG GGCGGACTTTAAGGTTTTTAGAGTTTAAATCATCAATCATGCATGTTGTG GCCTTTTTTGACgcttgaagatattttaaaactGCTGTATTTATCACTAG ACAGTAAACCTCTGACCCTACAATATGGTGGTGTCTCAAAGTTAAATCTT GCCCAATATTTAGTATTCTATAGCTGATAAGCATTAAATTTCGATTTGCC AtcttttgtttaaagaaaatttgatgtATTCCTTGTTGTTTTAGGTTCCA CAATACATTTTGGATGAATATTTGATGAAAGCACGAGAGCAAGCCTGTAA TTGTAATATCGTCGTCACACAGGTAGGCTGAACTCTACTTTTACGCCCGT TTTGCTTGGCTGatacaaaaatattcaacaatAAAGCTTTATTTCATGGA TTTCTACTGTCTTGTCACATAAATTCTAAATGGTTCAATCAAAGTTTGTC TTAATTCTTGGTTGAAGAATTGACATTAACATTGAAACCATATAATTGAC CGAAATGAATGAGTCGGATACCTTTGAGAACATTTTCATATACTTAGTGA TTTTTCCCAACGGTGGCAAGAAATAatataaaagtaaaataaaaactttt aaatctatTGACTACCTGTTTGAAAAAAGAGGAAGCCCTTTTTACATTTG CTCTTTTTCTTTCCCTTTTCAGCCAAGAAGAATCAGTGCCATCAGCGTAG CAGAAAGAGTAGCAACTGAGCGTTCAGAACCACTTGGGCATAGTGTCGGT TATTCTGTCCGATTTGACACTGTCCTACCCCGTGGCCAGGCTTCCATACT CTTTTGTACAGTTGGTGAGTCAGCAATATTGCTGTTTTTTTGTCATCAAA TCATTCTGAAGATTTCCAAAACATTCGTACTCTATTAAGTTCATTTTTAC AAGGCAAGTAGTGGGAGTAGAAgaggttttctttatttttgatgtcATTC TATGTAAATACTAAGGCTATATAATAGTTCATTCACAACTAGAAATCCTC TAACCAGACCTGTACATCATCAGCAATTATTTTTAAGCGTAAAAACTGTA ATATGTTATGAACAGATTGCTGgaaatggttttatattgaATAACTTAAG CTTCGTAGGATGTGTAGATGTCttataaaatcagaaaaaccttCTTTTAC TTCTTTTACTCATCGTTATTCTACTTGTCTGCGACCACGGTCGGNTcttc ttttatttcttttactCATCGTTATTCTACTTGTagtagtaagtctgcga ccgcggTCGGAGGccggctcctctttcgatagctatctacccgaacaAAG TAGaggagggtgccactctttctccctggattgctccacttacccttgat ccttctcttaattgctgagcatcaagcagataGGCATCAAGTACAATTTG GAAATCTttgtatgacccggctgggggctgaacccacaaccttgcgcacc gtagtgggatgctctaccactgcactacggtcgctaaaTTCTATTTAATT CTACTCAGGTACTTTATTGAGGCGCTTGGAGAATGGTATGACAGGCATCT CACACGTGATAGTTGACGAAATTCATGAACGAGATATTAACGTATGGAGG GATagtatttttatttaacttaaAAACACAATCTGATCTTGGTCTAGAac cctttttgaaaattcatttaAGACGTGGGACACAAGAAGTCAGCTTTCAG GATAAGGGAATGTTTTTGAGTGGTGGGACCTCGAAGCTGTTCTACGCACT TTTAAACATAATATAGTTAATAAGAGAGTTTTAAGTCTTCCAAAATCCTC TCGATTTTCCTAGTTACGTGTTGTCTATCGGTTGTGTTAcattgaaaaag taaaaagtgcTTTTGTCAAATTATGCAAGAAAGATAAAATCATTGGAATA TAATTAGGAAATTCAAAACAATAGGATTTGGCTGTTGTTACTATCACAAA CATTTATCGAAATTTCTGCAAAGTCTTTCTCTTCCTTTACAGTCTGATTT CTTGTTGATCATTCTACGTGACATGCTTCAAATCTTCCCAAACATGCGAG TTATTTTAATGAGTGCCACCATCGATACCACAATCTTCTCGCAATTCTTT GGTGATTGTCCCATTATTGAACTGGAAGGACGTGTTCATCCTGTCCAAGG TAATATTGTGTAGTTCTCCACATTTTGTGGTATAGTACCAGCCCTGGTTA TTCatcaaaacacccctgtgtcacagacccgctgggacgcCAGCCCCACT GTAAAATCTggcaaaatttcgtccccgatgagaaaataccctggaatttt agccccactgggaaattgacttatatttcatccccactcgaaattaaatg ttttaaaaattgcacttcaaaaccatttttcGGGAAAGGCTTTATAGCAG ACCCTTCACTACACTATGGTTTGCTTTACTTTGGATGTTTCGTACCACGA GATTTACTACCAATACTAATTTCGTTTGTTCAATCGTCATAGAATATTAC TTGGAAGATTGCATTCAAATGTTGGGTTTTGTACCACCATTGAATACGAA GAAGAAAAGAGAAGAATTTGAAGATGTAGAGGAAAAAGAGGTGATTATCT CTGTTATCTTTCTCGGGAACTCTTTTATATTCTGTTTCATATTTGATATC CAGCTCGGATTGTATTTTAAAGACTTTGTTAGCTCCGTTTCCTTTACCGT AAATCATGGTAACCGTGGCCTAGtttattttttgccaaaatctttgacca aaattttcgTTTCCTGTTTTGTACCAGTAGAGAAGCCATTTTAAGTGTTT ATTACATGCCAAACGGAGCTACCTACATTGCATCAACACTTCACAATAAA AAATGTTAGTTTGATTATTCTTTTGATATCTTTACTTTTCAGGAAAACTT AAATACTGTATGCGAGGGTGACTATAGTTTGCAAACTAAGAACTCAATGG CTCAACTGTCTGAAAGAGAAATACCCATCGAACTGGTCGAggtaaaaaaa cattatttagttTGTCTATatattgagaaaaatatttttaaagcaaGCCA AGCTTAAAGTTGATACAATGACATCTCGATCGTTCTTTGGTTCGATTCTC CTTTGGTATCCATATTTTTAGTTTTACCCAAATTACGAAAATGAGGTTGA TTTCATTGAAACACTTTTTTGCAGGGCTTGTTAACGTACATTTCGACCTT GCGAGTACCTGGTGCTGTATTGGTGTTCCTTCCTGGGTGGAGTGTCATTC ATAAGTTCGTCAAATATTTCCAGATGCATCAAGTTTTTGGTAAGGAAATC CCTGTTCGATAAAGAAAATTGACTACTGTTCTATTTGGTTCGTCTTAGAA TCGGTATTTTACGGTGATAGCCCAATTTTTTCGGACCTTCAGGCAGTCCT TGACTAGGTGGAACCGTGAAGTCCTCATTTAAGACGCTGAAGCCTTGAAC ACTCGGTCATCGGTTTATAACATTCTCCCTTCTCGATTCATTACATTCTC CCAGTTTGCCTCCACTTTTCCGaatgaattttcaacaaaatttactAGCA AAATGGCCAAGCAAAAATTGTAATCCCGCTACAAACAGAGCTTGCAACCA GAACTTTCTGTATGGTTGTATGAATTTAATTGATTTGACTTGTTCTCGTA TTACAGGAAGTAGAGATTATGTGATACTACCACTGCACTCGCAAATCCCT CGTGAAGATCAGAGACGTGTCTTTCAACCTGTCGCTGAAAACGTTCGCAA GGTATGTATGCTTATTTCCAGGAGAGCTTCTGATAGACCGGTATTTCGGT ATCGCAACTTTCATTTCGGTATTCGGGTATTCGGAGGAAAAATTACCGCT ATTCCGATATTAGTTTGAAAAACAGCTAATAAGTTATGAACACTCTTGGT TTTTTCAGATCATCTTTTCAACGAATATCGCAGAAACGAGTGTGACAATT GATGATGTTGTTTTTGTGATTGATTCATGCAAGTAAGTGCACATTCCAGG TTGTTTGTTCTAAcaaagtcgtttaaaaatcttttccgaAAAGATTACAA TACTGCAATTACTTTGTTTCATTTAGATAAGTAGTTCAATTTCTTCAGTT ACCTGAGTATAGTCATAtagagatgccttggagtttttacaagatacttc actaattggtcatttaaagtgatagagatgacgcgttctttggAAAAAGT AATacgattcttttattacatcttaacgaccaaccaaatcaaataagagc ttgtaaaaactccagcttgtcccgtcATATAACTATGTGTAAGAATAAAA CTAACGATTCCAAGTTTAGCAGTGAACGATAATTGAGTTTAAATTTAGGA GGTTTTTAAACTACTTTGTTACAACAACCTGGAATATAAGACTAATTAAG TTTTGCGACCAAAAATTATGCACCTTTTTTCACATATTTCAGAGCGAAGA TCAAACTATTCACTTCCCACAACAACATGACAAATTATGCAAAAGTCTGG GCCTCACGTACCAACTTAGAACAACGTAGAGGTCGTGCTGGAAGAGTGAG GCCAGGATTCTGTTTTCATCTGTGCAGTAGAGCAAGATATGAAAAGTAAG TTTTATTGTTTTGAGGTCATTGACATTTGTGATAGGTTTCAAAGTTTTGC TTTCAGCCTTTAACTGGACATGAAAGAATgtctttcaagaatttttatta ttgtctCCGAGAGATAgtaaattaaagtctgtccagatataattggcagt ggaaacaagaatgcctgtaacttttaatagtgaaatataattccaaaaat ttttttttgcttgttttagagaatcaaaagcgctatatttgaatgtattt ttggttgaaaaattcgcgatttttagcggt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00043118TCONS_00043118Clytia hemisphaericatranscript
TCONS_00043119TCONS_00043119Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00043118-proteinTCONS_00043118-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003928supercontigsc0003928:1417..8446 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.9 10.45 13.4 14.5 16.42 14.11 17.39 17.41 12.32 14.62 12.91 9.33 11.86 11.78 16.19 19.06 23.16 23.79 11.7 10.93 19.47 19.89 12.76 17.08 16.91 18.4 9.75 7.88 10.34 11.3