XLOC_026822 (gene) - C. hemisphaerica

Overview
NameXLOC_026822
Unique NameXLOC_026822
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003905:2..7038+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026822 ID=XLOC_026822|Name=XLOC_026822|organism=Clytia hemisphaerica|type=gene|length=7037bp|location=Sequence derived from alignment at sc0003905:2..7038+ (Clytia hemisphaerica)
ATTTCTTTTGATCACTTTTCACGAAGGCTTCGAAACAGGGAATCTACACT
ATGCTGAAATATCTGTAATTATCCTGGCGATCTTTAGCAATAACTTACTA
TATCTTCGACGAGCACCACCACACTTGGCATTCAACTGTTCAGTCACCTT
AGATTCTTCCAATCCATACTTGTTCTTGCCCAattctaaaaaatcaaaac
caaatcaGGTTAGTTATAAACTTCTTCATTTCTATTTGTACTGTTTGCGA
GAGCAAGGAAAAATCGTTCTTTGCTGTATGTTTCTCAAAGCTCATAAAGT
GTACACTTCAAAAACTTTCATATTAAAAAAGGTGGATAAATTAATTAGAA
AAACAGCTTTATAAAGTGTACGTAGATTATCCCTTTTCCCCCATGCATGC
CTGTATGCGTTACCAAGCATCCTCTCTCAGAGTTAAGAACTTTCTGGTAC
TTTTTGAATGATGTCTCCGCAAATATAAGTTCTTGactgaatatttttaa
tttttccactATATACCGACAGAAATCAAATTTcgccaaattcaattttt
tccctgaatgtatCAAGAAAGTtaaccttaagggaactttttttggtgag
aactaattttgacaaACGACCGATTCTAACTTTTCtcttttggcgagaac
ttattttggcaaaccaggaattttttgattttggcaagaacttaatttgg
caaatgacctaaaaaataatttcagtgggaactaaatttggcaaattttg
agtTCGCTctccaattttgccaaaataagtaTGGTAATATGAAGAAAGAT
AAAGAAGTCTTATTCTACTTACCTAAAAGATCAGCaacaattttttcatt
caatgcTGGCTTTGACTTTCTAGTCTTTTTGTTTTCCTTGCCTTGTGCTG
ACGACCTTAAAGTTTTAAGTGGAACATTTagcgctttctttgttttactA
ATTCCGAAGCTAGAAAATATTAATAGAGGCATATCGTCTGAAGCcaggta
acaaaaattttctggaatggcccaatgtNAAAATGCATATCGTCTGACGC
caggtaacaaaaattttctggaatggcccaatgtgaCAAAAAACAAGAAT
AAATGTTTCCTTGTTTGACTTGTAACAGAGTTAAACTGGAAGAGtctatt
ttttataaagaaGAAATTGTTTTCTTACTTCCTCAAAGTTTTCTCGTCAA
AGTATTTCTTGACGATGGTATTGAAAACCGGTGTCCATTTTTGGTATTTG
TCGCTCTTCCTTTTCAACACCTTTATTTCTGCCACCGTCAACTTAACATG
GTTAGTCATTGGGAGTATCATTTCTTGCTAAAGGtttgtaaaattatgaa
aataaaactgTAGTTAGACTGAGTGCATGGTTCCGGTAAGTGTTTAAGat
accttaaggggattaatttttgcgggaacttattttcgcgagagatataa
aaattaaaatttaacaaATCAGCCcctttttgaccaaatttctttcattt
tcgtAGGGGTTCAGGCAAATATCATGATCTTAAATTTTTCGCAAGTATTA
TATTTTGCGAATTTCGCAAATCCaaaggttttaaaattttttaatcaaat
caagGTACTTAAGGAGGATCTAATATTTTCGTGAGAAATAAACTTTTACT
GGTACCTACCTGCATATCTGAATTGCTAAGATAACCGGTGCTGAcgtcta
atgtttttttttgttttctgtcGGTTGTTATTGGACTACTCTCAAAGTTC
ATACTTCTGTCCGTCATTACAGGAGTTGAGTTCATCTATATAGAAAATAA
CAAAGTTTTCAGTTTCTTATATACACATTCAAGTAATTTTTTCTTGCTGC
TGGTGCtgtttttaaccctttaaaaACAGATGTATGTAGGGTTAAAACTC
TAATTTTCCACCAATTTAATCCTAAGTATACTTTGAACTCAGCCATTACA
GGCTCCActttaagaatttttcagccTCGTTGTTTTCGTAAAGAAagttt
attttagatattctcACTTTATGAAAATTTCTCTCCTAAATTTATCACTT
AACCAACTTTAATAGATACACTACTCACTTGGTCTGTTCCAGGAAGCACT
TCCTCATGCTGGTCAAGGGTCATACTCTCAGGAATAATCTATGAGAAAAG
GATATTCTTATTCTTACAAGTCCTTATAAAACTTGCTTTCATTAAAGCTT
TTTTCTTGACAGGGTATGAGCTGAATTTCCTAATTTGATAacggtgtttt
ttttaattattatttacAAGTGCATTTTAATTGAGTTATTAATAAGATGT
GAGTATATAGTGGCAAATTCAACTTACTGTGGTTTTTTTGCCATTTGGGA
AGGAATGGCTGATTTGTTGCGTGACTGTCACTAAATCAGGAACTAGCCTG
CCCAAATTACTGAAAGTTGACTCTAAGAGAAAAGAGGTTATGGTGAACAA
CAAGGCTGGGTGTTGTGTGGAGGTATCTAGGGTCTTTAAAGAGTAACATG
GTCACATATTTCCCCATGTCCTATTTATTCACaagctacatgttttttct
atATAAATGTTATGTTATGAGCATAcacaggctcagtttttggtttCCAa
acaattttgttttagagCAGAATTGGAAAATTTANCGTCATTACAGGAGT
TGAGTTCATCTATATAGAAAGTAACAAAGTTTTCAGTTTCTTATATACAC
ATTCAAGTAATTTTTTCTTGCTGCTGTTGCtgtttttaaccctttaaaaA
CAGATGTATGTTGGGTTAAAACTCTAATTTTCCACCAATTTAATCCTAAG
TTTACTTCAAACTCAGCCATTACAGGCTCCACTTActttaagaatttttc
agccTCGTTGTTTTCGTAAAGAAagtttattttagatattctcACTTTAT
GAAAATTTCTCTCCTAAATTTATCACNAGAGCCGCCTAAGAGAGGTTTCT
GTGTTACTCACTGATTCTAACATTgtaatgaaataaataaagaaaGACAA
CAACTTAATCGACTAAGCACTTATTTATTATGATACTAAATTAACTCGAA
AGTCTCACGCAGCCTCAATTAGAAATATATCTCACCTTCTTTATTTCCAG
CACCCAGAGACATCTTGCTGCTTGGTTGAAAGCCTGAATTGAAACAGGTA
GGACAATTTTTATAACTAtggttttttttgcttttatgtTCAGGGACcta
atttttaaaatgcagatTTGGCTTtagagaagaaagaaaaaatgtcaGAT
ATTTTCTGTTGGCAATATGCAACAATTGTATTGCTTTCTCGTACTAATTT
GCATGAAGCGAACAAAaccattcaaaaaaattttaagcttCTGAAATCAT
ACGGGTAGGTTAGGAAttaattcaaattaaaatatAGCTAACATTAAACA
CTTATTTATTATGATACTAAATTAACTCAAAAGTCTCACGCAGCCTCAAT
TAGAAATATATCTCACCTTCTTTATTTCCAGCACCCAGAGACATCTTGCT
GCTTGGTTGAAAGCCTGAATTGAAACAGGTAGGACAATTTTTATAACTAT
GgtttttttgcttttatgtTCAGGGACctaatttttaaaatgcagatTTG
GCTTtagagaagaaagaaaaaatgtcaGATATTTTCTGTTGGCAATATGC
AACAATTGTATTGCTTTCTCGTACTTATTTGCATGAAGCGAACAAAaccc
ttcaaaaaaaaattatgcttcTGAAATCATACGGGTAGGTTAGGAAttaa
ttcaaattaaaatatAGCTAACGTTTTTGCTGGTCGAATACTGGACTTTT
tgctgaaagaaaaaagttgaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNGTGTCAGCGCTTTTTAGCTCATTGCCTTTAGATCC
CATTAATTCTAAAAACAGTTTAAAGGTAAACAATATGTCAAAATTGCAAC
TGCAACTTCTTTTATCTTATGCCCATTTTTTatgaataatattttgaaaa
aaaatcaccaaaaccaCAATATTATATATCCTGGAAGTTTTGcattgaaa
tttttaatttaattggTAGGGCAACAGCAACATGGTTGCTGATAAATAAT
TACTGGTTTATGCCTCTAACTCAAAGAGAAATGTCTTACCGTCAAAGTTT
TGGACCCAGTTGTCAAGGATGTTCTCGTTAAGCTCAAAAGATTTGTCTAA
GATTAAGATAGAAAGTAAAGTATtgttcaaaatttctgaaatgatGATCT
TAAATTTTCTTTAGCTTTAAGATTGAATTTTTAAGCTCTAGCCATGACCA
AGAACTAAACTGCTCAAGTAGTAGCCTAACCCAGACATAGATAAACCCAA
GATATTTTGAAACTTCACTGTTTTAACACATTCTGCTTACCGCCACTTTT
GTTGATGATAATAGACGAGAGTATTTCATCTGTCTTTTTGATTGCCTTTT
TTGCTGCCTTGTCTGCTTTCACTAAAAAATGGCATAAATAGGGTAGAGAg
actttgaatttttcaattggggtttgaaattattttggatCAGAGACTCC
ATAAGATTTAGGACTATATGCACAGGTTTGttaatttgatatttcaatat
ATTACTAAGTAAACTTTTGTGTGGTATACCTATTTCAGGATCTTGCTTTT
TAGTCTTTTTGACTTCCATTTTCGTGTCAGTCTTCATTACTAGGAATTGA
AAGTGATATTCTTGCTTACTTGGCTGTTTCGATTTGAAAGCGCTTTTACT
AGTTTAAAAGCTGAAAAGTTCTAatttagaaattaaaaaaatataacttt
ttaaaCTCGTTACAAACAAGCAAaacttaattccaattttaAGCAAGATG
TGCTTTTATGTGTCATTCTAGGCATTACCTTCTTCTGTAGAGGCTccttt
cttctttgtttttttagtcTTTGGTTGTGTAAGTACGTTTTCTtgagttg
aaaaagaaaaagatagtTGAAAATATGTTTATAGAATTACATGGTATTTG
TGCATTGCTCCTNcttcttctttgcttttttaGTCTTCGGTTGTGTAGGT
ACGTTTTCTtgagttgaaaaagaaaaagatagtTGAAAATATGTTTATAG
AATTACATGGTATTTGTGCATTGCTCCTTAGCAAGGGAATCAAAGATTGA
GATTTTAATTTGAAAGGTTAAGCTAGTGCCAAAGAGCTACAAACAATAAA
AAGTTTTCTAAGATGATAGAATCAATACCTTTATCAATTCCATCTAAGGT
ACAATCTTCTTTTTGTTCCGCCTGGCACTCCCGGGCCCCTgaaagatgaa
atatttttcattcttcAGTCTAGTCTTTCTCAATAGACCCTCTAGATTGA
AAATCTTACCAAATGTAAATACCACCTGGGCTTAAAGTTAAGTCCTTAGC
AGTTAAGATGTCACTTTTAATTAAACGAATGACGAATTTATCTCTTGACA
GGTGCTGAGGCTttgattgaagatgaaaatacaaagaagaGATGGAAGTT
TATCTGGTCCATTAGCACCGTCTtggattcaaaagtataatgGTAGTCAC
AAATATCAATCAAAATTATTGGACTGAACAATTACCTTTTCGTTTTTTGG
CAACAGCTGTCACGCAAGCTTCGTAGTATTTCTTGTGATGTGGATACCAG
AAAAAACCACGTCGACCAACTTTTATCCCTGACATTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00043080TCONS_00043080Clytia hemisphaericatranscript
TCONS_00043081TCONS_00043081Clytia hemisphaericatranscript
TCONS_00043082TCONS_00043082Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003905supercontigsc0003905:2..7038 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.27	0	0	0	28.79	22.15	10.03	11.45	8.68	12.67	9.5	5.77	6.71	8.81	0.7	0.83	0.25	0.36	0	0.04	0.31	0.19	0	0	5.94	5.02	0	0	0	0