XLOC_026760 (gene) - C. hemisphaerica

Overview
NameXLOC_026760
Unique NameXLOC_026760
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003851:119..3664+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026760 ID=XLOC_026760|Name=XLOC_026760|organism=Clytia hemisphaerica|type=gene|length=3546bp|location=Sequence derived from alignment at sc0003851:119..3664+ (Clytia hemisphaerica)
atactttatACTTGTATACCAGTCAATGTTCTACCAAAAATGGTGAGAAA
TAAATAAGGAGAAATGGTATCAGAACTGGAAGAGTTAAGAACTCTTTAAA
CCTTTTTGTATCATTTCAGCTATATGAAAGTTTACAACGGGATCACGTGG
TCATGAAACAAAATATGTATAAACAGGACGACGAGTAAGATAGTTTTTCC
ATTAATAATCCATTAATATAAAATGAATCTTAAAACAAAGTTATGATAAG
ACAATCTTTCGCGACCATTTTATTTCACTCTCGTTTTTTTCCCGTAGGCT
AAGTATGATTNcaagtaaccattcaaatagtatttatttgacatattttg
agttttgtttagaaatatttcgcggatgaggcccttccaaatttccattg
ggatttaatttaatcctcgcgaaagtttatcccattaaagtaatgtttta
cgttttttaagTGTTTAGTacataaatcaaaatttctgtGATATNTAGGC
TAAGTATGATTACTTTTTCTGAACTTGACGATAAGTGTATGGACGTCTTT
GATAAAATGGAATTGATGGAATCGGCTGCCGTCAAATTAATACACAGATC
ATCATCTGTTGAAGACGAAGTGGTGGATGACGGGATTGATTTGAAACATT
CCGAAGAAACACTGTCAACTAATGGTGGTCATGTATTGCCAAATGGTGGC
CATCGTGTGTTGCCGAAACCGAACCTTGAAGGTCACTTTCAAAaggttat
tttttttcaaattctagtTCTACGATTTTAGCTCTAAAttatattttgtt
gaaaaaactaATTTACTGTTCGgataaaaattagttccctaaaACTTACT
GTAAGCTGATATATTACCTATTTTAATTTCGTCACTCTTCTTTATATgat
atgaaaaatagaaaaagttagaaaagatagaatcactgattgaaaataGC
CGACAAGTAAGAAAATATGGTCTGAGTCTGATTTCTCCCCTTTCCTGTAT
CTTTGAAACATATTGACGAAATGAGAAAGGGTGGTCGAACTAGACGACGT
TATCTAACCATACTcaaatgatctttttatagatGGACATCAATAAAGCG
GCAAAGCAAACAGGTAATATTATTTTTGCCAGTTTTTCATTAGTCAAATA
GTTTAATTTATGACAAAAACGAGTTCATTTTGTGTCATTGTGCcttttta
tttctcatttttttgatTTACGAGGAACTCTTACAAGGAATAAATCGACT
TTTGTGCTTTGTATTATCAATGTTTCTTACTTTCAGACAATAGTTTCACG
ACGTATACAACAGAAGACTTAGGAGAAATGACGACTTCAGAATTGAAAGG
GCAAGACCAGTCATCGTTCACTCTCCTCATGGAGCGAAAGGATAGTGGTA
ATGTGCAGGTAAGCCTAATGAGACACTTTTCACACGCTCAGATTTTAGGT
TATGAGTTCAAACGGctttgacttttattttgtaGTTCATAAATGTTTCA
AGACTTGTGCTCGTTGTTTTTGACAATCCAAGgatgttttttaaagtttt
ttcctCATTAATTTTCGAGTCATGAAAAACTTTGATTATTTATCTGAAAA
ACGTTGATTCTTTTATCTGAAAAACGTTGAttctgttttgaaattgaacT
ACCCAATCGGCGCTTTTTAAACTGATCCTTTGCTTACACCGGTTCCTTTT
ACGCCTGTCTTGTCCGCCACTCCGCTACTTTCTAAGTTTGAGCCTGCTCC
AGCAAGGAACGTTCATATAAACGCCAAAACCTGTGAAACAATCACTGAGC
AAACTTCAGGAAAGTCTTAAAAAACACTCCATGATATGCGAATGACTata
attacatgtttttcttttcataagcataacgtttatNTGATATGCGAATG
GCTataattacatgtttttcttttcataagcataacgtttataaacaTAC
TAAGACCTGGATTTGCTGAAAAATAAAGCATATCATTAGCTTAGCAATGA
GCTTTGGtcattgaacaaattttggTCATTGGGAGAACAGAATTGCAGGA
TTCCTAATTTTCCAAGAGATTGAGCCTTTGGTCATGTGGACGACGATATA
TACGTAGAAGAAATTCCTTCATCACTTGATGATcgtcaacaatatttttt
aataactttCTTACATAGGATGAGGAGATGTCACCGACAGCACGTTTACA
GCATTTGTTGACAGAATCACGAAAGATGGTCAAAACATTAGAAGAATCTC
CAGATCTATCATCTATCCATTCGTCACCAAATAACCTGTTCCTGGTAAAT
ATCTACAACTCTAATGCCACTATCTACCACTTATTAGGACACTTTACTTT
TGAAACAATTTCTCAGCACCCATCATTAATTAAAAATCTTTGATTATTCT
TCTCGAAAATATCTTCCCAATGGTTTACAACTTTTTAATATAACTTGGAA
AATGTCAAAGCAGTAAAATGAAttgtcaaaataatttattcgCATTAATA
GGAGGAGGACCCATTAAATTGGAAAAACAACGGTAAAAGAAATTTCCACT
CTGTATTAGATCTAGGTTAATGTAGCTTAAaccaaatacacgtttttttt
ttttaagaaacatgaggctcagaatgcctaaaaactaagaaacatctaag
aaacatgttgaggctgagaatgagaaaataacattttttaattaggtttt
tttaagaaccttcaaatccagcctttcataaggctgattatgtcaaaaag
tttagaaacatgtaagaaacatttaagactcaaaaggccgatttcttaag
aaacattgaggctgcttggtagaactagttttttaaaaaaaaaaaaaacc
cggtttttaAAAACTTTCCGCAATTCccccaaaaaaggtacccctttttt
tttttttaagaaacattgaggctgcttggtagaactagttttttaaaaaa
aaaaaaaacgtgtatccttTTTCGGTGAAGAGCTGATATGTTTGTAGAAC
CGTGTTTTTGTTTATAGGATAATAAAGAGATTTAAGAGAAGGAAAAGGAG
AGGAAATTCATAGTTCAGAACGTTCAAACGACAACCTNAAAAAACGTGTA
TCCTTTTTCGGTGAAGAGCTGATATGTTTGTAGAACCGTGTTTTTGTTTA
TAGGATAATAAAGAGATTTAAGAGAAGGAAAAGGAGAGGAAATTCATAGT
TCAGAACGTTCAAACGACAACCTGACTCGGGATCGACTTTCGCATGAAAT
GGGATGAGCCTACAAGAcgacagttgacgctctctaattcgattttcaag
gggaattggatcttcattgaataagggagcgtatcgaatggtAGAGCGTT
TTTTATGAGAgttttcttgttgacggtgactttcaatattatcgaataac
ggagcgtatcgaatatagtcgcgcggctgaggtcgaaaaccgtttcattt
cgtgatacatcttttagattccaaaaaaaacaacggaaactcgcgaatta
gtatgtgtagattacaaaatcaaaaagtttccacgatattatcgtg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00043009TCONS_00043009Clytia hemisphaericatranscript
TCONS_00043010TCONS_00043010Clytia hemisphaericatranscript
TCONS_00043011TCONS_00043011Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00043011-proteinTCONS_00043011-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003851supercontigsc0003851:119..3664 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.19	2.11	1.36	0.72	67.4	52.35	29.82	26.51	15.79	19.89	15.31	12.2	5.65	5.76	5.21	6.21	6.47	6.01	3.92	3.28	4.53	3.84	4.46	4.69	16.63	16.15	4.46	3.81	4.41	3.15