XLOC_026686 (gene) - C. hemisphaerica

Overview
NameXLOC_026686
Unique NameXLOC_026686
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003778:111..5488+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026686 ID=XLOC_026686|Name=XLOC_026686|organism=Clytia hemisphaerica|type=gene|length=5378bp|location=Sequence derived from alignment at sc0003778:111..5488+ (Clytia hemisphaerica)
GTCGGGGACTGCAGCTTCTGCATCGAAAACCCAAATGAGGTATGATAGCT
GTATAATTAAGAATCGATTTGTCGACCACTAATTGTTTTAGATAAGTTCT
AGATAAGGCCTCAATATGTGGTGTGTGAAAGACCATGAATATTGCCATGA
GGAGAGCCATTCCCGGGAGTCAgctgtatatatttttaacacTAAATACA
TTTTGTTTAAATGTCCTCTCTTTCAGATTCAGCGCCTCTCCAAATGGGTC
GATTCTATCGCCAGTATAGTAAGTTCtaatcttagattcaaaacttactt
ttgatcgccatctagacgagaagataaaaaaggccaataaaggaaTTGGT
CTTATTAATCGACTTCGCAAGCATGTGCCTAGGAGATCTCTACTAACNNN
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NNNNNNNNNNTGAGAATGGGTCACAATGGAACCGAAATAGACTTTGCTTC
CTAACTTCCAATCTTGATCTTTTCCAACCTTGCAAGAAACATCATTTTGC
AGACTGGCCTTAATCTAACTATATATCACTAAAACATGGTTAGAAATCAT
TTAACTTTGGTATAATTGTAAACCTtgtatatttggaaaatttcttgTTA
AAAAGAATTTAGATCCCTTCATATTGTAACATAACGAtgattgtaaattt
ttttttcagtggtgACTTTCTAAATAGCCTCCTTGGCACTGATCAACGAA
ATGATTCAAGCATAATCGAAAACAATAGGTAAGAGCAAGCCCTGTTTTTC
TACTAACTTGATTTTATTTGTAGTATACAGTCTTGAGGCGAAATATAAGG
GCCGTATTGGGTCAATAAAATCTGTATTTGGCGAGGTTTTGCCGAGAATT
TGCAGGCACGACACTAATTATTAccattttctttcaattcagTCAATCAT
CTAGTCAAGAGCATCTTGTTGGACAGCAATTTGACCCACAAGCTCAACTT
TACCAACAAAATAAGCGGTAAGACATTTGGGAAGTCTGTgttcaaaatca
aatgaaagagCTCCAGCTCCAGCTCATGCCTTATTGAGCTAAAAAAAGTC
ATAATCAACAATTTTATTTACGTTCCGATTGATACAGGTTTGGGAAAATG
GCTTGAAAGTAATATTgctttttaataataatttcaGGATTGCATTGAAT
ATTTCGTAATTATTTGGAATTTCTTTTCCTCTTCAATTTGGCcttcaaaa
taattaaaatgaatgacttttttaaaattttagattgGTTGAAAGAGTCA
CAGACTTGGAAGGGAAAGTGGCCACAAAATGTCCAAAATGATGACACATC
GAGAATCCGCCGCAACCAACCGGGTAATTTAGTTATAAGCTCCTAAATGA
CTTTCTCGAGAATAAAGCAAATCATTTTAGTTCTGTAGTTTTTTTTGTTA
ACCAAATataaaatgactgtattctttcaaattctgtgaaactcacccgg
agggtattcttagggtattcttacgatttcgCCAATCTTAAcactgatat
tcttataaaagatattcttattaaaacaaaaagcgtgtaataggtcaata
atttccgaaaataGGAGGGGTTGATTAAAGTTTGGAGTTTCCCTTTTCAA
GAATGGGGATAGATAAAAATAGGGACACTTTTGGAACCGTTGCACCCACT
ACGTCAGTATATTAATTTACTTATATTCCATCTTTTTAGAACGATCACAT
TGAAAGCTACATTGCTGAAAACCACTATTGTAAAGTAAGCTCACTCTAAA
TGATTTCTATAATGATTTTCCTCCagctcccactggaaaaattgtcaaaa
ttggtTGGAAAGATACCCTTAATGTTTACCCCATTCTAAAATTACCTTAT
TATGATTTATCACCATGGGCGATTAGTATTTGTTGAAAGGACCAgggaaa
ttcgaaacaaaaatatGATATCAAAAGTTTTGCCTCACACTTTTTTTCCT
CACACGTTTTGCTTACACTATGTTTTaggaaaataaatgaataagtaatt
tatcttttttttatttccaggcTACTCTGGATTCTATATCCAAATCAGCA
ACCAGCATGGGAAGCCTCACCAGGGAGCTGATGGACGAAATTCTAACGGA
GGACGAGTTTGCCACCTGCACGGTCAAAGGACAAGGCCAGACAGATCGGG
GAGGAATCTCTGAGGAAAAGAGAGAAATTATTGAAAGTAAGTGTATTTAC
CACAAATACGATTTTgatcttaaaattttatgtctttttttatataaaaa
tatgtaCTAGAGGTATAATATGTAGTTCAGAAGAGGGTTGCTATTTCAAA
ACTCTATGTAATGTTAAATTAGGGATTCCCTACCGAgtgttttaaaaaaa
gttaacaaGTTTGagtttagattttgagaaagcCAAAACTGATATTAGAT
ATAAACTTTTGTTGATTCATTTTATGGGGGTACATactgttctcaacttc
agttgagctataattctcaacttcagttgagctataatctgagaatgtct
gtatgtctgtatgtatgtccgtccgaaaactttttagggcaggctggaca
cttcaaaaaaggtcggatttggctgaaatttggcacacttgctccttggg
tgaatatctgggggtgtttttttcattttttgaaNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgggt
gaatatctgggggagtttttttcaatttttggaaattttgattcttgggg
cctggggacgagtttttcgccaaaacgaggctaaaaccttagggcagcct
ggagatttcaaaaattgttcgatttggctgaaattttgcacacttgttcc
ttgggtgaatatctgggggtctacaatcgggcctatgaataatttgaagc
cactgaagttgagcccagtgcgttgcgcacctTCGACTATACATGTATGT
ATTGCATATTACCCAAATTATTATCAATGCTACCATACTCATTTAATGGG
GATTTTCCCGTAGAAAAAGGTTGAAAGGCTGTAATTTCGGTCTCTTACGA
GTCCTAGAATCTCCTAGAAAAGTGCAGTCGATTGGAAATCTTCTGGTTTA
AAATACTCTTTCCTTGTGTATTTTGTTTAGAGTACGTCAAGAAACGATAC
GGGGAAAGTGCATCTGATCCTACCATCCGCACGTTCATGCGTCAGTATTT
CACCAATCGGCGACGCACAAAGCCTGAAAATCGAAAGAAGGCTAGAGGAA
ACGAAGAGAGGGAGGAATAATTCGTGCTCACTATAATTCGTTGTAATTTA
CTTGCAAATGTACTCTCTATTTTATTAACACGAGcctagaaaattacaaa
aattaagaacaattcaagggcGTCTCGCAACTAACAGCAGCCTTCCATAA
GGGAACTAATTTACAGTAATTTTCGCGTTGTAGGGTGTCTACaaactact
ttaatcgtagaaattttagcgagactaattttagcgttttagcgagtttt
ccctgtTTCCGCTAAAAtgaatctcgct
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00042919TCONS_00042919Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00042919-proteinTCONS_00042919-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003778supercontigsc0003778:111..5488 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.33	0.54	0.22	0	2.51	2.67	4.53	5.03	3.41	2.78	4.79	4.28	3.07	4.49	0.91	1.07	1.6	1.13	2.15	0.6	1.24	1.25	0.42	1.09	1.84	3.71	0.15	0.21	0.75	0.15