XLOC_026667 (gene) - C. hemisphaerica

Overview
NameXLOC_026667
Unique NameXLOC_026667
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003760:4978..8910+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026667 ID=XLOC_026667|Name=XLOC_026667|organism=Clytia hemisphaerica|type=gene|length=3933bp|location=Sequence derived from alignment at sc0003760:4978..8910+ (Clytia hemisphaerica)
ATATCGCGCCATGCGGAGTTAATTTTTTCGTCAGGCTAGAAAGCAAAATA
TCACGGGCTAGCGGGAATTCAATCAATGACCTCTATTGAGTAGCCAATCG
ATGACGGTCGCGTCTATTTTGTAAACATTAGATTTTCGACGAGTCATTTT
TTACTGGATACCCTTTCtccctctcaaattttgaatcaTGAAGCCTTCAA
AGGCTTTTTATTGCATGCTTCAGTTCATTTTGTTACAAATTGTCAGATGT
AAAGATGGTAAGTTATTTTATTTCTGCTAGTTTTTAGTCCCTCCATCACG
CATCAGTCAGTCCAGTTGAATTCCGCACAAAcggaattaaaaaaaaccct
ttttaacctttttaacttttttgttctcattcaaaatgaccggtcANAGC
AAAAAcggaattaaaaaaaaccctttttaacctttttaacttttttgttc
tcattcaaaatgaccggtcAGTAATAGGAGAATTAGAGAACCTCTGCCGC
CTTACCTGCCTATCGCCCGatgagattaacaaataacgagtgtgtaactt
gccgcgcagaaaaagtgacgtcaaacgcgcTCGACAtacatcgttttgcc
actaatttggtcttcttcgttccagacattcgcgtTGTGtattccactac
agatttttttcatatttcgatttaaaagcctactctgtgcgaaagagaaa
ttgtgtattttttaatacgccgttgaCTTTGACTTTGAAGGTTCGGTGTG
AAATAATGTGCCatcccagaaaatttttgttaactACCCCTGTCGGACGa
cgttaattttttaattttttctagcctcagaaataatttttatttttcca
gtaGGGCGgcaatctaaaatatgttccgttcgcgtcgcccgaccaactca
ccttcaaaacataaatcccGAGTCGgacaagttgaaaaaatgtcggaaaa
agtttttaatagctaagcacttctttgtactttgaatcatcattcgctaa
aggccggtttccacttgcgcgcgctacgATCGCACTTttgggcttcaatc
ctttttgcttggaaaaaagattacgtcataaaaatgtagcgcgcgcttga
aaaaaaaaattgaacacatttcaacttttttcaaccgttacgtcagttcg
cgccaatggagttgcttcatttttcttttgaccaatagcctggaagcttt
gctcgaaaaagcgcaatcgaagcgcgcgcaagtggagaccggccctAAGA
GTTTTTGTTACTTAccacattgagtcccgtttgagttttttcatgcaccc
ttattgaaattttcaagtcgaaATACGGCGACACGGTAGGGCCAATACCC
CCGAGATCCGAAAATAAGGTCCGCTTTTAAGGTTCATACATGCGTTGCGC
ACATTGAATTTGgtaaatcaaagatggcggcaagagattttgttgattgc
cgacttgattcttTGGGATTCATTAGATTTTAAAAACCCGACAAAAtcta
ctaccgaccgaccgaccgactggatttgaagttgttttataacgcgaaca
gaacatattttagatAGTCGCCtagtcagtgtagacctaactcttcatac
aaaaattacgggaaacgcatatttggactttggaccctatgctgcactca
agcacttgagccaaaatcccgcaaaggcgggacaaaaatcagttttttga
agtttgcaaaagaAACGCCACatacatagaagatctttcaaattcagtat
gtgaatagagcagtaaaaaatacaacttttctatttttccttttttttgc
aaaagttctaggaatgaaaataaagggataatgataattgaatactagta
tccattgatgatccacggcactatcgtaaagctagaatcgcttcgcgtac
tcttcgcttgagaaaatgattgacagattgaagtttttcatccccacGGT
GTGCGCCGCGTgggagctcgggcgctctgcgagagttcttggctcaatcc
tcggaTCCCACTAAAAATGgcagactgagctgtgatagatcatttcgatg
gaagttgtatgaatgtttacaaggctcttgacagaatattctttgtttta
ttgtcaatgatgacagtgccgttataaattttgttagatctgacaaattg
atgtttgtaagtgcactttatagttttgattcccattgaagaatcatatt
ctggttttcatgttattagatgctgttttagagctttagagctacgcTTT
TAGTGGTGAAAATCCATGTatatacttttgcaaaatgcatcagaaattcc
actcttttttgccttttttaattcaattgtaCATTTtattctctcgcctt
ggaaattttaaattttggtgaaaacttttgccctcagaaatcctgtgtcg
tccgcccccttgttacagacaaattctggaatggcccgaTGGTGGCTGAA
TTttcgtcccatgttttgtcagatagtcccaagttagaccAGTTGACAGT
ACACGTGCGTTTGTTattaagttgaagttggtttgatattctatGTTTGA
Tataaaccttttttcaaagaggacgtcctgttgaataattatgtagtcca
gccataaaaaacaatgatagagccatgcataattactgtatcatgcatat
tgtaataattatgcatggttttatcattgtttttctgctggactacataa
ttattcaacagggtggcctctttgaaaaaaggtctattcgatattcgttt
gataatcgtttgatattctcaaattagcgttttgaagtttttgtgactac
ttttggaattggaaactattggaagccaatagagtttattctcaagggtg
tctgtgcaaaatttcagcgctcttcgtcgcagtgtgctccctctaaaatt
GTTAAACTGCAAATTCTAAAATATGCAAATATGACAACTTGGGCTACTGT
GAGGGAGAGCGGTTACTTTTTAGTTTgcaaactattggaagccaatagag
tatGTCGCCAAGAGTAATTGTGCAAAATTTGACCGCTCTCCGTAGCAGTG
TTCTCCCTCTAAAATTGCTAAAGTGCAAAATCTGAATTATGCGAATATGA
CAACAGTACTGTGATGGAGAGcggtcaaatttggcacaaTTACTCTTGGC
AACATACTCTATTgatattggcttccaatagtttgcAAACCCAAAAGTAA
TCGTAATTTGTTTACAAAACCACGGTACAGATTTGGCGCAATTAAATTGA
AGGtttctgaaaataaaacatcaattttaaaAGGGGTTACACTCAACTGA
GTCTCGTGTTGGCAAAATGAAAAGGATTCTATACCAAACCTGTTAGCTAT
GTGTAGGTATAGACTTAGAGGAGGTTTAAGGCTATCCTTATCATAAAAAT
GATGGTAAAACAGATCAAAAGTCAACATACTGGAAATCTtgtattgatga
cgtcatttaggtTTTTTaatatgcaaaaaattgacactgCAACAGGGact
tttgttttaattaaaatgtgtcagtttaatttttcataaattcctttaga
agttttctttttttaggctAATTATCCTATCTTATGTCTTATAGCCTTTT
TGCTAGATATGATGTTATTTTGAATGATTAAAATCTGTAGTTTGCAATCA
AATGTCTTTGAGTCATACAAAATAAAACTTTCTCTCTTTTGACTAATGTC
CTTCTTTTATAGAATTCCAACATGTGACATGTGGTTCatcattgaaatta
tttaacaatagacaaaacatacgattacATTCTCATGATGTCAAATATGG
ATCAGGAAGTGGTCAAcaggtattttattttttttaactacCGTACCATT
TGGTCAACAGGTATTTTATTATTTAACTAccaattttgcaattttttgac
ctgataacagatgtcattcccagtcctttcaAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00042897TCONS_00042897Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003760supercontigsc0003760:4978..8910 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
72.91	70.6	67.79	66.77	2.17	1.94	5.79	6.98	28.78	21.39	19.51	24.75	15.16	15.21	16.95	18.46	19.04	19.35	6.13	9.18	27.53	21.75	31.62	27.95	0.71	4.15	30.03	23.46	27.2	28.65