XLOC_026250 (gene) - C. hemisphaerica

Overview
NameXLOC_026250
Unique NameXLOC_026250
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003401:4896..12115+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026250 ID=XLOC_026250|Name=XLOC_026250|organism=Clytia hemisphaerica|type=gene|length=7220bp|location=Sequence derived from alignment at sc0003401:4896..12115+ (Clytia hemisphaerica)
aaaCATCATAGTTATATCAAGCAGGAACCAATGTCTCAGTAATTCATAAG AGCATTGCGCTTTGCGAAGAAGACAGATAAAGTTGAAGTGTGCACAACAA AAAGGTAAGTCTACTTGTATCCTGCTCACAACAGACAAACATTCTAAGAC CCTTTTCAAAACCCCCGCAGCTGTGGTAACTATTTTGATCCGCCCAATCG TTCCCCGCAAACAGTGCAACCATTTTAGGCATAGTGGGCTTGAAAAATTA GATTTCGGTACATAGATTTATATTCCAGTTTTTATTTAAGAGTTCAGTGG GGGCGCTATAGAGGTTCTTCACATTTtgctaagttacgtaatttccgcca ttatggaagaaaacattcgattttgtAGAGGCGATCCCTTACGCAATTCG AACGTTTTACACCATAATGGCGGAAACTAAGTAACTTAATGAAATGTGAA AAACCTCTTGTGCGAGATTGTTGGCTAAGATTACAAAATAATCAGATTGT AGAGTTGATAATTTTTGCAGACTCAATACATTTAAGTGTATTTAAAAAGG GGTAAGCGGATTATTAAGCCCGGCAAATTATTTCTTACATTCATAACCAC TTACACCATTGGAAAGCCCTCAAAAAAACGATTTacccaaaaaattgaat ttttttaattgataccttctctttttttgttaataactcccgagaaaaat tttttaaccctTCGTGCACCTGGGGCTAACGTCATTgctacctgatgacg tcatccatTTTTGACACCTCCAAAGATAGGACCCCCCTCTAACACttcta tattttttgttcaaattttgtaCGGAAACTCCATTTGACATTTATACAAG GGGCACAGGGTAGTCCAGGGGAATTTAGGGTTGACCCAAAATTTGCGTAC ACatggaattttttgattgaaatgtgttcattaGGTCCCTAGGAGTGAAA AACCGTTGCGTGCTACTTTGCACACTTGGGCATTTTCCATAACggcggaa atttcaaaatggcgaattttgaaattttttgaattgttgatgTCTTCGAA CATAGGCATAATATATACcgtttgaaagaatttttcacgctgaacaactt ttttgcctacaaaaaagtctgaaaatgtactcaatgtgGGTAAAAAGCGA TAGAAAGTGTCAAAATAACGTTatcattttcccaaaatttgacatttgtt CCAAACTATTGagtgttatataccgttgaaaaggatttttcatgtttaac ttttttactttttcaaaaaagtttgaaaaaattactCAATGTGAGTGAAA AGTAATAGAAGGTGTCAAAATAACGTTCATTTCTCCAAAGtttggctaaa atattaagtGTTATACACACCgttgaaaaggattttttatGCTGAACAAC AAGATGTACTTAGTGCAAGTAAAAAGCGATAAAAGGTGTCAAAAATTACG TCTAAAATGCTGAAATTTAATAAATCTGATAAATATTCCAAATGCATGTT TTGAAAGAAACAAGACGAcctgaagtcgaaaatttcgcctagaatttgaa ctgcatgggaaaaacaagaagtagagattgaagctaatctgaaatctact ttaaaTAGAGcattgatgaaacaattttacaagaacaacgaggcttaaaa tcgcttaaaaaaataaaaccaatttaagaacaattgttgttaaattttta agaactcttataaagtgtatgcttataagaaaagtaaatatgctcatatt gtacgccaacccttgtttactttgtaagaactaataaccaaaaggtatat caccgtctatcaagagttattgatttgattcttataaagtacatgcttat gagaaaaataaatatgctcatattttgcaccgtcctttgtttactttgta agaacttattaccgaaaggcatatcactgtctatcgagagttattgattc gattcttataaagtaaatgcttataagaaaaatgaatatgctcatcgTGT GTGCCGTCCCTTgcttactttgtaagaactaattccGAAAGGTATtggtt tgtttcttataaagtaaatgcttataagaaaaatagatatgctcatattg tgcgccatcccttgtttactttgtaagaactaattataCCGAAAGGTAtt tcaccgtctatcaagagtaaatgatttgattcttataaagtatatgctta taagaaaaatcaatatgctcatattgtgcgccatcccttgtttactttga aagaactaGTTACCGAAAGGTggatcaccgtctatcaagagttattgatt tgattcttataaagtatatgcttataagaaaaataaatatgctcatattg tgcgccatcccttgtttactttgtaagaactaattataccgaaaggtata tcaccgtctatcaagagtaaatgatttgattcttataaagtatatgctta taagaaaaatcaatatgctcatattgtgcgccatcccttgtttactttga aataactagttaccgaaaggtatatcaccgtccatcaagagttattgatt tgattcttataaagaaacgcCCATTTAAAAAACGCCCACACGCCTATATT ATTGCGCCCCAATAATGTCTCGCCAGCCAGACACATACACGGAAGgcgat cgtaatactttcgctaagcgaaattaataagtTCTCATTAACTAAATGCC CTGACTTTAGGCCGAAGAGATTCTAATGGTTTAAACGCTGCAGACAACCT CTTTTTTGTTCGCTTGACCCACATGGAGAATCTACCTTTTTGAGAGATTG ACTTCATTCAGTTTTATTCCGTAGCAGGCAGCAATGAAATAGATTCTTTC TTGAATGATTGAATCTTCGGTATATGTTCGGAATAGTAAATGACCGACTG AACCACCTCTATGGGTGCTATCAAACATTATACATGGCTCAGGGTCAGTT CCACACCTAGGTTGCTACTCTTGGTATCCAGTTCAAAACTTGTGAAGTGA CGTAAAATGAATGGAATAATATCCTTATTTGTTAACAAAAGCCTTCGACT CAAAGGAATAGACAAACGACACAAGGAAAGATAACAAACATCTTTGAAGT TTATGGGATTCCTTATCCAATCATTAATTCAATCTTGGCACATTACCACG GAACAAATGCCTTCGCCTGATAGAGATACAGATCCCTTTGATATAAGTGA TGACACCTTTTCTATTTTATGTGGCTATGATATGTACTGGTGAAGACTTC TCTCAATCGTCACTTAACCAGAAGTCTATACTACACCTCCTAGATGCAGT ACAAACACAGGCTGAGCTTCGAGTAGTGCTGAACATCTCCTGGCGTGAAC ATCCAACTACATAGCGCTTCTATAAAAAACTATCTACTAATTCTTCTCAA ACCATTATAAAATTTCGTATCACATGCTTGCCTGTGACTCGAACATGAGT AAAGACAAGCTTGCCAGTGAAGTTATCACCTCGTAACCAAAACAGGAAAG AGCAAATGTTGGAAATAGACCACACTAAACTTACTACCAACTACATAGTA TTGAAGACACTGGCTGTAAAACCAACGAAATCGAAATCACTGAACGCGAA ACTCTGATGGCAGACAGGGATGTATGGAGATAGATGATCAGATTGTCTAG TTAATCAATAACCCGTCCGTCGTGTAAGGGTAGTGATAGTGTTTAGTATT GCCTGGCTGTCATATGTACAGAAAGATTACACAACCAGATGCCCAGGAGT TGCTGACGTCACAATGTCGGCTTGCTTTATAGTtctttggttgattttga tGAGTATCTGAAAAGGATTTCATAAGAAATGGTGATCGCACTGAGTATTT ATGGACAGGATGATGTTAGCAAGACAAAAATGTCCTCAGTATTATGACAT ACAAATTTGATGGGGGACTTTCGTTCCTCTTCCCAATTTACGATACTCAG TTGTAATGATGTCTGCTCCCTTTGTAAACGATTGATAACATATACTTATA TGATACTTAGATACTTTCATGCTATGATAGCAGGAAGCTTGTAATCCTAG GAGGGAACATTGAGTGTCAAAGTAGTAGTGTAGTAGTAANTCAGGAAGCT TGTAATCCTAGGAGTGGAACATTGAGTGTCAAAGTagtaatacaataatg accggttagtgagggttgtactgagaaatattgcccgaggtcaagaaACG ACcaagcttgcgaggttgttgtgTTGACcaagggcaatattttcagtaca gcccgaaaataaccggtcattattgtatttgttaaccgtttccttcagct tcgattgatttttagcgctttatccaggaaaaatagcaaaataaagcgaa aaaaaatatgcgaaaagagataaaaattgttataatttctgaccACAGAA ATAAAAANCatgcgaaaagagataaaaaaaatttataatttctgacgtca gaaataaaaaaatgagagaaatgatgtcaacgcattgttcattttccttt gaaaaagtgacatcacaatgaattttcctaacgacgggcaactctggaca gtctaggcccgtcgtcatgcaaaaagtaccaattgcattgcgcaaaaagc cgtgtagctcGCTTTGAAAAAGTAGTCGGTTAACAATGTTCAGTGATGCC TAACACTTGCATTTTTCAGAAGtaaaaattatgacgtcaattATATATAG CTTCTTCTGTTTTTTACTCACATTGAGTAAATTTTTAAACTATTTTGTAA GCAAATAAGTTGTTTAGCATGAAAaatcctttccaacggtatataacact CAATAGTTTAgagcaaatgtcaaattttgggaaaacgatgacgtcatttt gacaCCTTCCATCGTGTTTTACTCACATTAAGTACATTTTCAGACTTTct cgtaagcaaaaaagttgttcagcgtGAAAAATACTTTCcaatggtatata atatgcctaTGTTTGAAGACAAAGTGTGCAAAGTGGCCGGCGGTTTTTCA CTCCTAGGGACCtaatgaacacatttcaatcaaaaaattccatTTGTACG CAAATTTTGGGTTCCCTAAAAAGAGCCAGAAATTCCCCCGGACTAAGGGT CAATTTTGCCCACCTGCCATAggcgtgtattttacagaccggcccaaatt tgcctaaattAGTCCTAAATTTTTATATCTCAAGATTGGAAAATGCTATT GTCTTGAAATTTGATCAGTGGTAGGTATTGATAATGGAAACTTGCTCTCA AAATTTTAGCGAAATCGGACCATTAGTTATGCAGAAGGTGAGCATTTAAG GTAAAATACTGAccgttctgtaaaataccaaccgcACAGGTGGccgactt gaaattttgcacattgtCTTAGATGGTCAAGACCtatcactggtgaaaat ttcaagtcctTGAGTTCCGGAAAAGGggggtgtgtattttacagaccagt ctgtaAAGTACCAAATACCACCCTGGAACTATTCTTTTTCGGTTTAGTCT GATTGGATTTGGCAAATACACGCAATTTCAACGAAGCCAATTGGATAATT CATTCTAGCAGCTAATTtattattctggtctgtaaaataccaactaaACA GGTGGCCGACCTGAAAATTTGTAAATCATCTTCATTTGTCAATATCTGTC ACTGGTGAAAGTtcatagcacttgtcaatcttgagatCCGAGGGGCGGGC TAACATGCCCCTCAAGATGCTCTGCATataaaaaaataggaagatgcaCG AAGGGTTAAACAATAAAGCTGTGTGTCCACTGAAATTAAGCTATTGCAAA TAGTTTGCAATGAATAAATTTCTTGTCGCGAATTCTTTATCGCAAGCACG TGTTCACAATGTCcatctaaaaaataaatatttacgaAATATTTCGGCGA TCATGAAAATAAGTTTTGTATTTAACTCTTTCCGTTAGTTTTTTAGAACT TCCAACTTCAGATGCAATTATCTCAGCTTCCGAGCAATCTTAATATGTGT GGGTTTGTTGCAAAGCTCTTTTCATGCTTTATCTTTTCAGTGTGCCAGAT TTTTTAATTAGGTCCTCAAAAATAATTAGGGCAGCCGAAAAATATCGTTC CAAATTGAACGAAAGTAGCTGGGGCCGACAGGAAAGTGTTAAAAGAAATG TGTTCAAAAAAGATGTATCTTAACTTATCTCCATGGTAAcacaaaataca aatttattaaaaacaaaCGCAAACCGCAAACGCAttgaaaacgttttcat tttcTATTGCCAATTATTCGGAATTAATTTTGATTCTAAGACAAAAAATA TTTAGCGATGAAATGTGtccactggaatttttttttcgatggaCAAATGT TTTCGCGATGATCATTTGCGACGGACATATTTTCTTTCAGTGGACACGCA GCTTAATTAAAAGTATATATTTCCTGAAAGATCATGagatttcttaaaaa tgatgGTGTTCATTAAAATCCTATCTGGTATACTGAATAGGAGCAATTAT TAAGAGACCAAATTTTGACCTAGTTACATTCAAAAGAGATGAATTCACTC ATAGCTTTCCCAACtggcacacagcgttgtttcaacgttcatctagcaTC Cagaacgttcatttaacgttagatgaacgttaaaacaacgttgtgtggca GCTGGGTTGAGCTATCTATATGATTACTAAAAAGTAAACCCTGGCACTTA AAGGTTTAATTCTAATCAACTCATTCGATCTTCCATACAGTGCAATAATG GAAAAGCTGATCTTCATTGGTGTCATTCTTTGTATGTGTTGCCCATGCGC AGATGCATACAAATCACCGTACATTTGGGGGGACCAATACTCTGGTGGAT TTGTTGGCTCTACCATATATTGTGATCCAAAGAAGCCATNAATCACCGTA CATTTGGGGGGACCTTTATCATGGTAAATTTATTGGCTCTACTATATATT GTAATCCAAAGCCATACGTCCCCGGTGGTGGTATACAAACGATCCAACAA ATTAAGGCTCCCAAAGCTACACTTGAAGAAAACGAAGTCCTCAGTGGTTT TTCAGCAGGTACCCAAGGAACAGGATTTATTGCAGGACTTACAGGTTTCA TTGGAGAAGGGTCgtccaaaataaaaaacattcaaaaactttttaatacT GCTTCAAAGATGGCATCGACCATGTGGTTTGTCAGTGGAATCTTGTCTTA TCTTGGAGGTGAACCGAGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00042406TCONS_00042406Clytia hemisphaericatranscript
TCONS_00042407TCONS_00042407Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00042407-proteinTCONS_00042407-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003401supercontigsc0003401:4896..12115 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0.32 0 0 0.4 0.38 1.03 1.84 0 1.71 0 0 0 0.09 2.03 1.36 0 0 1.13 0.73 1.54 6.39 20.32 8.06 0.2 0 0 0