XLOC_025712 (gene) - C. hemisphaerica

Overview
NameXLOC_025712
Unique NameXLOC_025712
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003028:11111..14477-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025712 ID=XLOC_025712|Name=XLOC_025712|organism=Clytia hemisphaerica|type=gene|length=3367bp|location=Sequence derived from alignment at sc0003028:11111..14477- (Clytia hemisphaerica)
TTTGGCCGGTATACAGACATAAAAAAGTGCTTAGAAACATGCCTGCAGTG
AATGTCATGGATGTCATTATAAGATAGCCATTTTTTTAGCATTATTTCAC
ACTTTTAAAAATAGAATTTTTGACTTATTTAGGTTTTAAATTTTGCTTTA
ACAGTTTTACTTTTTAACCTTTTTTTAGTTTGATGAAACAACCATTATCA
ATGCTGATGATGCTGTTCTGAAGAGACATGGATTAGAAGCTGAGGGAGAC
ATAATTCGTTTAAGAATCTTGTGCCAACAGGGGGATACAAATACCAGAAA
AGTTCACCTTAAGCAAACGATAGCAGAAGGATCAANGGAGACATAATTCG
TTTAAGAATCTTGTGCCAACAGGGGGATACAAATACCAGAAAAGTTCACC
TTAAGCAAACGATAGCAGAAGGATCAAAAACTAGAATGGCAGCCGGACAG
TCATTTGAAAAGAGTCCACCTAAAGAAAAAACAAGAGCAGTATACATATC
ATGGAAGGTGTTTGATAAAAAGTTAGATCGCTATGTCCAAATAAAGCGAA
AGCGTGGTGGCGGCAGTGTTAAATTCGATTTTTCTTTGAGTGCTGGAAAA
GATGAAGTGCTATCAGAGGCCATCAAACACTTCTGGAAACTCAAGGTAGC
TAAAGTTGCAGATGGTGCTAAAGAAGATTATTTTTTCCATCTTGTCGATG
AACGTGATCAACCAATTCCAGACGTTCTTGCATATCCAAATGACAGTGAA
GTTCCTTTCACAGTATTAAGTTATGTAAAGCTCTTCAAACTTCCGCGACC
AAAAATAATTCTTTTAACAAAGGAGAAGTCGAACCAACAAAAGATTTTAA
GCCATCCTAGTTTTATTGACAGCGACGAAGGTGAACAAATTGACCTAGAC
ACTCTTACTACATCTCCTGTCCATCAATCAACTCCAAGACAAGTGAATCC
AAGTGAACACCTAACCCCTGTCAGCACTCCTACACCAACTTCAAGACAAA
TAAACTCAATTCCAGATTTTACCCCTGAAAATAGCCCTACCCAAACTGCA
GCACCAAGACAGACAAATCCAAATGGAGGAATGCTGATAGGATCAAGCGA
AGAACGTGATGCTCTCAGAATGCAAATAGATAAGGCAGTTTTAGAATCAA
TGATTGCTGATCGCCAAAGAGATGTTGAGCGCCAAAGAGAAATGGAACAT
CAGAGGGAGAATGAAATAACACTACAAAGAGAACAAGCTGCTGAAATCGA
AAAGCAAGCAAAAATCAATCAAATAATGGAAAAAAGAAGATCACTGGTGA
AACCCGAGGCTGACCTTCAAGATGACCATGTAATTGTACGTGTGAGACAC
CCTACTATTGGTAATATCACTAGAATGTTCTTCCACAACCAAACAATGAT
GGACGTGTATTTTTGGGTGGGATCACTTACCAATGATCCCCTTTTTTTTC
AACTAACAGACTGTGATAATGTTATTAGATTCCCAGATGAAAAAATAAAT
CAGGGAGTCTATAACATGGCTTCAAGAAGTGACAATATTAATATGTCCAG
GGATGGTGACATCATGTTCAAAGATTTTGCATCCGCTTTCAACAACGAAG
ACATCATACAAATCTCAGCTGCTGAAGAACCTAACTCATCTGTTGTAACT
AATTCGTCTCTTGTACCTAATTCGTCTCTTGTGACCGACCCATCTGNTTG
TAACTAATTCGTCTCTTGTACCTAATTCGTCTCTTGTGACCGACCCATCT
GTTGTGACCAACCCGTCTGTTGTGACCAACTCGTCTGTTGTACCTAACTT
AATTGGTGATTCCAGTTTTTTCAGTGCTCCTAACTTGGCCGGTGATCCCA
ATTTGTTGAATAACCTTAATGATGTTGAAGCTCCACCAAACTACCAGCGG
CTAGAACAACTTCGTCTTTTGGAAGAAATGAAGCTATCAAGAGAGGAAAT
GTTTATTGTGAACAGAGATAATATTTTTCAAGACTTTCTTGCTGCGTATC
AAAGTTTTGATGATACTGCTGTTTACAAATTCAAATTTTGCTTTAAGGGA
GAAGATGCAGTAGGAGACGGAGTGACACGCGAAGCTTACACATGTTTCTT
TGAACAGCTATATGAAAACTGCGACGGTAATCAAGAATGTGTGCCAACGC
ATTCCTTTACTGTAAATGACTTAAATGTTATAGGAACAATCATAACGCAT
GGCTTCGTAACATATCAAGTTTTCCCAGTGAAACTGTGCAAAGCATCCTT
AAAGCATCAATTGTTTGGCAATGTGTCAAGTGAGGACCTTGGGTCGTCCT
TTCATCGGTTTGTTTTAACTGCAGAAAGTGATCTTTTAAAAAAGATTGAA
AATGGTGTTGTTACAGAAACGCAGGCAATACTCAATGTTTTTAGTGATGC
TGGAGTGTTTACTTTACCTACAAAGCAAAATATCAAAGAGCTTGTTTTGA
AAGTTAGTAATGTTCTACTTATAAGAAGCTGTACTTATGAAATGAATGTA
ATTTCGACAGGTATGGGAGAATTTTGGAAAAATGCTGGACCTGACTGCTT
AGATGCCCTTTACAAGTGTACAATTCCAACTGCAGAAAATATTATTGAAG
CTTTGCACCCCGAAGAGAAAATCCGATCTGACCAGCAATTAACCACTTAT
TTACACCGATTTATTCGATCATGTGATTTTGACGACCTCCTTGGATTGAC
AAGATTCGTAACCGGCTCCCATTCCGTTTATCCAGGTCTCCAGATTTCTG
TCAAATTTGTAGACCCATCCAGTGATCAACTACCAAGATCGAAAATGTGC
TTTAACATCTTGTATTTGCCAAGAGGTTACACATCTATGCGCCAGTTCAG
AAATCGCTTTTTTGCAGCCATTAGACATGAAGAATTCTTTGAAGTTACTG
ATGGCATTGAATTTGAAGGCGATCTTTAGCATCGTGACTTCATTAGTTTT
TAACTTTTATATTTCTTTGAAAATATCTTGATTTTGTTTTCAATTTCTGA
AGTCATGGTTCTTTGATTTTGTTTCAAGAATTTTTAGCTTAAGTTCAGGC
TAAAATCTTTGAGAAACAGTCCCTTGTTTTGGAAACCATTTATACTTATT
TTACACTTTTACATTTCCATTCATTTCAATTTAGTTAAACTGGAAAATGG
AAGGCCTTAGGTCTCATCCTAGATTTTTGTTTAGTTTTCTGCATTCTTTT
TCTCCATCTTAAAATTTGTGGAGCTAATGACGTCGCTCAATCATTAGACT
CAAACTACAAACGAGAGTTTGTGAATTCAAAAAGTTTGTATTTGGTTAGT
CATTTTAACTTTTTAATATTTATCTGTTATTAGTTGTATTTCTATTTGAT
ATATAATCATGAGCCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00041806TCONS_00041806Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00041806-proteinTCONS_00041806-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003028supercontigsc0003028:11111..14477 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.76	0.62	0.5	0.3	1.02	1.04	1	1.05	0.63	0.79	0.8	0.85	1.44	1.19	2.18	2.25	1.68	2.54	1.68	2.2	2.31	2.3	1.28	1.92	0.3	0.43	1	0.74	0.92	0.97