XLOC_025688 (gene) - C. hemisphaerica

Overview
NameXLOC_025688
Unique NameXLOC_025688
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003019:8360..11515-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025688 ID=XLOC_025688|Name=XLOC_025688|organism=Clytia hemisphaerica|type=gene|length=3156bp|location=Sequence derived from alignment at sc0003019:8360..11515- (Clytia hemisphaerica)
ATTATGTTTAAAAAATGAATTCTGTGAATGAAGAAATGAAAAAAGAAATT
GACAAAGAAGAAGTTCATGGTTGTGATGAAACCAATCATAATAATTTGGA
AATTATTATCAAACTGGAAGATGAATCAATTGGATATCCAGACGACGCAA
TTTTGGAACCATTACAAAACCATGAAAGTGAATTATTTAATAATTCTTGT
AGAAATGTAAAGGGGAACGATGTTACATCACCCGAAGAAACTGACCCCAA
AAATTATGAAATCACCATTAAACTTGAAGATGAGTCAAAACCTCAAGATG
ATAAGAATCAAAGTGTACAATTAATGGATTTTTTGGAAAATCGAAATTTA
GTAAATATTAACGATGGAACTAATTGTTTTGATCAGTTTTCACCGATTAA
GGAAATGAATTCACATTTCGGGGAGGAAATTACTATTAAATTTGAAGATA
AATTGTTTCAAAACCATGAAAATGAAAATTTACAGGAATGTTTTGAGACT
GACAAGATCGAAAATCCAAACATTGACGAAATAACGAAAAGTTCGATTAA
AGAACATCAAAGAACGATATATGATAAACCTTTTAAATNGAGACTGACAA
GATCGAAAATCCAAACATTGACGAAATAACGAAAAGTTCGGTTAAAGAAC
ATCAAAGAACGATATATGATAAACCTTTTAAATGTCAAGAATGTAGTAAA
TCTCTTGCTACAAAGAGAAATTTGTTGAGGCACCAAAGAACATTCCATCA
AGGCATAAAAGCCTTTCAATGTCAAGAATGTGGTAAATGTTTCGCAGAGA
AAAAGAAATTAACTTCGCATCAAAGAACTGTTCATCAAGGTATAAAGCTT
TTTAAATGTCGAGAATGTGGTAAATGTTTTGGACGCAAGACAACCTTAAC
TTTGCATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTC
CATTTACAAGTTATCTTAAGTTAAATCTTTTCAAACATAATAATTTCAAT
TCTTTCTTTTATCTTAGAGTATTTTGTATAAAAAATGAATTCTGTTAATT
AAGAAATGAAAAAAGAAATTGACAAAGAAGAAGTTCATGGTTGTGATGAA
ACCAATCATAATAATTTGGAAATTATTACCAAACTGGAAGATGAATCAAT
CGGATATCTAGACGACGAAATTTTGGAACCATTAAAAAACCATGAAAGTG
AGTAATTTAAAAATTCTTGTACAAATGTAAAGGGGAACAATTTAACCTCA
TCCGAAGAAACTGACCCCAAAAATTACGAAATCACCATTAAACTTGAAGA
TGAGTCAAGGCCTCAAGATTATAAGAATCAAAGTCTACAATTAATGGATA
TTTCGGAAAATAAAAATGCGGAAAATATTAACGATGGTACGAATTCTTTT
GATCAGTTCTCTGGAAATGAAGAAATTAATTAACCAATTTGGGTAGACTG
GAGTCGTTTATAATGCGTGTAATACTAATAATACCAATACTAATAATAAT
AATACGGGATTTAGTTTGTATAAACGACTGGAAGAATTCGGTNNNNAATA
ATAATACGGGATTTAGTTTGTATAAACGACTGGAAGAATTCGGTGTTCCA
GCCTTATAGATACCCCGGCTAGCTACGCAGAAACTTGCGTAGCGAGAAAT
CAATTTATCAAGCAATAACAAACTCTGAAAACAAAATAAACTCAAATGAA
AAACTTTCAATACACAAATCCACACACATGTTTTTCTCAAGAATTATTTT
GAGCGGGAAAAAATTATAATTGCAAATATTGANNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTATTGACACTTTTCTTTTGTTTGGAGTTAGTGCACAAAGGTTTCTAG
ACGACTAAAATTGTTCCCTTTATTACTTTTTGCTTTATTTCTACTATGTA
TGAATTAGTCTGCTAGACTACAATTTGGGAGGAAATTGCTATGAAATTTG
AAAATGAATTGAAAAGCTTTCACAACCATGAAAATAAAATTTCACAGGAA
TTTTTTGAAGCTGATAAGATTGAAAATCCAAACATTGACGCCATAACGAA
TAGTTTGATTAAGGAACATCAAAGAAGGATACATGATAAACCTTTCAAAT
TTAATGAATGTGTCAAGTTTTTTACAATGAAAAGTAATTTGAAGGTGCAT
CAAAGAACAGTCCATGAAGGTATAAAACCATTTTTGTGTCAAGAATGTAG
TAAATCTTTTGGAAATAAACAAAATTAACTTCCCATCAAAGAACTGTTCA
CGAAAGTGTAAATCCTTTTCAATGTCAAGAATGTGGTAAGTTTTTTGCTA
CAAAGAGAAGTCTGGAGATGCACCAAAGAACTGCCCTTCAAGGTATAAAA
GCGCTTTTCGATGTCAAGAATGTGGTAAATCTTTTGCACAAAATGTAGAC
TTAACTTCTCATCGACGATTTTTCCATGAAGGTATAAAGGCTTTTGAATG
TCAAGAATTTGGTAAATGTTTTATAGAGAAAAGAAACTTAAATTCTCAAC
AAAGAACTGTTCATGAAGGTGTAAAGCCTTTTAGATGTCAAGAATGTGGT
AAGTGCTTTGCAAAGAAAGCAAACTTATCTTTGCACCAAAGAACTGTCCA
TCAAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00041782TCONS_00041782Clytia hemisphaericatranscript
TCONS_00041781TCONS_00041781Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00041782-proteinTCONS_00041782-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003019supercontigsc0003019:8360..11515 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.54	10.77	5.19	3.45	3.86	2.81	1.75	3.49	1.56	1.21	1.03	1.31	0.86	0.31	0.45	1.05	1.25	0.84	0.65	0.09	1.36	0.9	11.42	11.92	0.74	0.72	1.95	2.13	6.23	6.63