XLOC_025604 (gene) - C. hemisphaerica

Overview
NameXLOC_025604
Unique NameXLOC_025604
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002965:11513..15446+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025604 ID=XLOC_025604|Name=XLOC_025604|organism=Clytia hemisphaerica|type=gene|length=3934bp|location=Sequence derived from alignment at sc0002965:11513..15446+ (Clytia hemisphaerica)
GGATAATAATATTTCATTTCTGCACATGTGCCGAAAAGTTCTCACGAATT
TAAAATTCAGAGCGAAAAGTGGAAGCTGACAAAAGCAGAGATTTACAGAA
AGAAGCAGTTGTTGTGTAAAAGAAACAAGATATCAACAGTTGGAGTGTTG
TAAGTttattaatatttcttttccttGTAATATTTTTGAACTGTATCTCA
TATCGTCTTTGTGAAATTTCCCCTGATTCCACTATGATCTTGCTATGCCA
ATGATTAAAAAGCATTACAATCACAGTTATATTTTTGCAGTTCAAAAAGG
ACTTCTGAGGACTTTTCTCATTGTTTAAGAATTCTGCAATGTAGTCAATA
CAGTTCCACTGTATTGGCCAATCTTTGGCCaccaaaattttacattttcg
CTTTCAAAAACATGTTGTGGACATAGGCGGCCAGTTTGGGTCATGTATGC
GGGAAAAATGGGCTAtttccaaggggtttttgtTCATTGAAGGTTGTTCA
TTGGGGTTATTgaaggtttccagggggttctctcTTCATAAACTGACATC
AATAGTTGTTTTCCAGCCCCTTTTTCACAAGATTTCACTTCCCAGAGGGG
TCTACCccctaatttccaggggataacttgttattcaaaatttccagggg
ggttactgaaaaagttcgtcaatacgcctgtataaatttttttttaaaaa
gcccAATTCAGGCCAAGCTGTTAGTCGTTCTTCTAAAATCAATAGAAAAA
ACCATTACAAACagtaaaaaattctaaatatcgTAGCTTTAAATGAAAAC
CGTATGTTTTGCTGCGCACTAAGTATTTAATCATATTCACACTCCTGATC
TTTGCAGAGAGTGATTTCATTCCTTTTTAAGGTAGTTTTCATAGTAAAGT
GTGTTTAATTTCTTTTGATCAAAAAGGTATCTGCACTTATTGTAAATTAA
TGATCAGTTTTTCGGTACAAAATTGGGAGTTGGGAAACAAAGACTGAAGA
TCTGACACTCATCTCAACTTAATTGAGGTCCGTTGTGCAATCATGCCTTC
TTTGTActgttttaattaaaaaaaattgcttcAATATAAAGAATGAAGTC
CTGACACTCGCCTCAACTATTTCACGAGGTCCGTTTTGTGCGTTCATGCA
TTCTTTGTAATTCACTGAAACAGTTAAACAAACTGACCACATTTACAGTT
ACAAGATTTATGTCTTGTTTATTAGTGGGTATCAGAGAAAAGAGTAACAT
ACCAAAACAACGTACCAGCAGGCAAAATTTACTATGCATATTAGGTAAGA
TAGCAGACTTTGCCTACAATGCCAATCTGCAATTGAAGAATTGTTTAATT
TTCCCCAATATTTCCAGGCAATGTTATCAACCATGTCATACTAAcaaatt
tttcaggttttcataATAAAGGGTGTTTAATTTCTTTTGATCAAAAANAC
GAGGTCCGTTTTGTGCGTTCATGCATTCTTTGTAATTCACtgaaacaata
aaacaaactgaCCACATTTACAGTTACTAGATCTGTCTTGTTTTGTAGTG
GGTACCAGAGAAAAGAGTAACATACCAAAACAACGTACCAGCAGGCAAAA
TTTATATTTGCCTACCATACCAATCTGCAATTGGGGTgtttaatttcttt
tgataaaaaatgtatCTGATCCTAATGGGTAAAAACCGTGTAATGTAAAT
TAATGATCAGTTTTTCGGTAAAAAATTGGGGGTTGGGAAACAAAGACTGA
AGATCTGACACTCATCTCAACTTATTTGAGGTCCGTTGTGCAATCATGCC
TTCTTTGTActgttttaattcaaaaaatttgcttCAATATAAAGAATGAA
GTCCTGACACTCGCCTCAACTATTTCACGAGGTCCGTTTTGTGCGTTCAT
GCATTCTTTGTAATTCACtgaaacaataaaacaaactgaCCACATTTACA
GTTACTAGATGTATGTCTTGTTTTGTAGTGGGTACTAGAGAAGAAAGTAA
CATACCAAAACAAGGTACCAGCAGATAAAATTTATTTGCCTACCATGCCA
ATAATCTGCAATTGGGGTATTTATTTCCTTTTATCAAAAATGTATCTGAA
CCTAATGGGTAAAAACCGTGTAATGTAAATTAATGATCAGTTTTTCGGTA
AAAAATTGGGGGTTGGGAAACAAAGACTGAAGATCTGACACTCATCTCAA
CTTATTTGAGGTCCGTTGTGCAATCATGCCTTCTTTGTActgttttaatt
caaaaaaattgctTCAATATAAAGAATGAAGTCCTGACACTCGCCTCAAC
TATTTCACGAGGTCCGTTTTGTGTGTTCATGCATTCTTTGTAATTCACTG
AAACAATTAAACAAACTGACCACATTTACAGTTACAAGATTTATGTCTTG
TTTATTAGTGGGTATCAGAGAAAAGAGTAACATACCAAAACAACGTACCA
GCAGGCAAAATTTACTATGCATATTAGGTAAGATAGCAGACTTTGCCTAC
AATGCCAATCTGCAATTGAAGAATTGTTTAATTTTCCCCAATATTTCCAG
GCAATGTTATCAACCATGTCATACTAAcaaatttttcaggttttcataAT
AAAGGGTGTTTAATTTCTTTTGATCAAAAAGGTATCTGAACTTAATGGGT
AAAACCATGTATATAATGTAACTTAATGATCAGTTTTTCAGTAACAAATT
GGGGGTTGGGAAACAAAGACTGAAGATCTGACACTCATCTCAACTTAATT
GAGGTCCGTTGTGCAATCATGCCTTCTTTGTACTGTTTTAANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAATTGCT
TCAATATAAAGAATGAAGTCCTGACACTCGCCTCAACTATTTCACGAGGT
CCGTTTTGTGCGTTCATGCATTCTTTGTAATTCACTGAAACATAAAACAA
ACTGACCACATTTACAGTTACTAGATGTATGTCTTGTTTTGTAGTGGGTA
CTAGAGAAAAAAGTAACATACCAAAACAACGTACGAGCAGACAAAATTTA
CTATGCATATTAGGTATAATAGCAGATCTTGCCTACCGTACATTGGCACT
TGCAGATTGCTGCAATTGGggtatttatttctttttattgaacCTAATGG
GTAAAAACCGTGTAACGTAAATTAATGATCAGTTTTTCGGTAAAAAAATT
GGGGGTTGGGAAACAAAGACCGAAGATCTGACACTCATCTCAACTTAATT
GAGGTCCGTTGTGCAATCATGCCTTCTTTGTActgttttaattcaaaaaa
attgctTCAATATAAAGAATGAAGTCCTGACACTCGCCTCAACTATTTCA
CGAGGTCCGTTTTGTGCGTTCATGCATTCTTTGTAATTCACTGAAACATA
AAACAAACTGACCACATTTACAGTTACTAGATGTATGTCTTGTTTTGTAG
TGGGTACTAGAGAAAAAAGTAACATACCAAAACAACGTACGAGCAGACAA
AATTTACTATGCATATTAGGTAAAATAGCAGATCTTGCCTACCGTGCATT
GGCACTTGCAGATTGCTGCAATTGGggtatttatttctttttattgaacC
TAATGGGTAAAAACCGTGTAACGTAAATTAATGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00041671TCONS_00041671Clytia hemisphaericatranscript
TCONS_00041672TCONS_00041672Clytia hemisphaericatranscript
TCONS_00041673TCONS_00041673Clytia hemisphaericatranscript
TCONS_00041674TCONS_00041674Clytia hemisphaericatranscript
TCONS_00041675TCONS_00041675Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002965supercontigsc0002965:11513..15446 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.89	4.41	2.13	0.31	8.85	6.04	5.85	8.57	4.3	4.49	7.99	2.62	4.87	7.47	5.52	4.7	7.72	5.99	0.43	1.73	6.02	4.84	4.01	3.36	8.17	12.96	1.47	1.26	2.19	2.67