XLOC_025494 (gene) - C. hemisphaerica

Overview
NameXLOC_025494
Unique NameXLOC_025494
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002907:5733..12560+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025494 ID=XLOC_025494|Name=XLOC_025494|organism=Clytia hemisphaerica|type=gene|length=6828bp|location=Sequence derived from alignment at sc0002907:5733..12560+ (Clytia hemisphaerica)
atacATATCATACCAGATCGAAATCTGTTTCTTTGGAGGAAAACAAGGTA AAAATAGTTTCTAAACTTCCATGATATGAACTAGAATTTGTTTTTCGCAC TTTACATAAGCACTAAAACCATGTACCTTTtaaaaaagtattgatataCT AAAAGTTTCTAGTTCCTGAAAGTTTTTGTTGGAGTGTGTTTAAATGGTCA GGGtatcttttttgtttcctttcttttttagttCGCGCTTGCACAACAGT TTTGCAGAAACAAAGAAGATCCTGAATATTTGATCAAATCATGGATCGAT GAATACATAGGTaactttgaagaagaaaaatttagcCATAAGTTATGAAG TAGCTCCTCCTCAACATTCAATTGATTATGGTATTCAGGATTTGTATCGG GTCAGACTCACATGAATATGAAGTTATTCTGAAACTTCCAAGGAACTACT TGTGATTAACGTATATATTATCATTTTCTAAAGGTTATGGTGTATATGTA TTAAAAGACTTGGTCAAGGGTGAGTTCATCTGTGAGTATCCAGGTGAACT CATTTCTGACACAGAAAGAAACCTACGTATTGAACAATATGACCAAGAAG ACTTGGGTTCCTATATCTTTGATGTTCAGATCGAAAATAAGAAGTATATG TGAGTGAATTAACTAATCTTAAAACACCTATTATAATACTTAATGTGCTG ATTTTTGTTTGTCTTCAAGTACGGTTGAGAATCATGGCCCAACATTAGAC GATCCTGAAACTTTAGGGAAAATTGAAAAACTGGTAATCCGATTCATCAC TCTGAAAACCAGGATTAGAAAAGGAAATTTCACTGTGTAACTCCAAATAC TGTCCATTATCTTTCAAGACCAAATTTAGGGAATGAAATCTACAAATAAA TTCATTTACGACCAAGATTAGGAAAAGAAATCTTACCGAGCATTGATTTG AATGAATTGAATATACAACTGTTAGTATTGTGCTGGAATTATCTTTTGGT TTTCAATCTTTCTAGTCTCGATGCAACACGATCAATAAGGATAGGGAGAT ATATCAACGATAGCCCTCCAAGACACGTAAATGCTCTACCAAAGGTTATC TATGTCGACCAGAAAGTCCATTTGTGCTTTTTTGCGGCCGAAGACATACC TAAAAACACTGAAGTGAGATATAGCTATAGCTCTAAAAATCTCACCTGGA GATCGAAGGTAATTTACTTTTGTAATACTAGAAATGATTTTCTTATACCA TTTTTTAGGTGTCTTTTTGCTAGGATGTTGATAGTTTGTATCTAAATCAA GCTGGAAGATTTAAACTACTCAAATTGAATAGAGAGCTGATATGATTGCT ACTTTTCAATATATTTTAAAGCTAGTTAAAATTGCGATAGGAGCTACCTA CTAGAAACCAGATTTTGATCGATGCATATTATATTTCTTTCACGGCCCTT TTGGCGAATTGCTACCTATAATATCAAATAAATCAGGAATATATCTTTTC CTTTCATGAGCATTGTACTTATAAGCACCGGACTGAAAATGATCCAAATG TTAAGCATACCGGATGCGGCAAGAAAAAGTATACAAGTTTTTCAAGATAT TGGAGCTTTAGGATAAGAGTTGTTAACTTATTGTCTTTTCATTGTTCAGA GGAAAGACTAACGCAAATTTTTGTGTATAAGACAAAAGTTAATAATAAGG TAAATCGATAAAATTGCATTTTTTGGTAAATATTCATCTTAAAAGTTGTC CCCGCCTCTAAAAATATAAAGATTATCTAAGAAAAGGCGCAAAATCAGGG AGTCAAAGTAGAGTTATGGTAGCATTTTGAGAGTTTTACTAGAGAATTGG ATGTTTTTTTGTTGAGTTTTTAGCTATTTAGCAAAAAATTTGGTAGTTTT ATGGAAAATTTCACTTTCTTCGCAAAGTTTGAGCTTTAGTGAACTTAAAT CATCCATTTTACAGTTACCAGTTGAAAAATCTATTCTTTTTAAGGCTATT CTACTGTTTAAAGGGCCACACCACCGAAAAACTTTTTTCCAAATATGTTT TTAATGCACTCAGGGATCACGAAACAAAAAGTCCTTTTTAGAATTGGGCT CTGGACATACAATTAAAGTCGAAATAAATTGAGAATTTTGCATATTTCCA CGTTTTTCGAATTTTGAACTTCGGGCGAGAGGATTGATTTTGGGCTATCT CTTGAATGTAATCGAATATTTCAATTTTGGCGGTTTTGGCAGACTTCCAG GTTATATTCTGAGCCTTATTGGACCATTTTTGAACTTTCGGATCCTCAGA TCCTAAGCTCCTCAGTCTTAAGTCTAGCGTTAAAACTCAGAGGTAAAACT CTACCCTTCCAACCTACTTTAGAGCAGTTCCAAATCGTTTGTGGTTATGA ATTTTCGAGGGTTAATTTCCCTTTTTTCTCAAATATTATGACTTTGTTGA TTCTACCCAAAAGTCAATTATCAAACTTTGCATCAAAACCTTACTCAAAG TATCAATTTTGATATTTAGCACAAAACTGCGTTTACAGAATTTCTTGTAA TGACTTCGTTCAATTGCAAAACACAAAAAGTAATTAAAAACTTAAAAACT AGAAAAAAGTTATACATTAATCTTTTTAAAATGTAGAAATTGCCATTTAA GTTGGGGTAAAATCAAAAAATAAGGTTTATCTAGAGCCGATAACTTCTAC TTTTTTTCACAATCTCGTCTCAAAATTCACAAAAAAGCTTCAAAAAACGA CCCCTTTTGAAAAAAATCTTTTTTAAAATTAAGTCAAACATAATAAGTCA AGATAAAGTGTGAACGCAGTAAATCAAAACAGAAAACACATTTTTCTTTT AGAACGATATTTCGACATACGTTTTTCAAGTAAGGAGAAGTACATGAAAA AGGAATGTAAGTGTCGAAATATTGTTCCAAAAGAAAAATGTGTTTTTTGT TTTGATTTTTTAAAATTAATGTATTCTGACGACACACTGAGGATAGAAAC TCTCTCTATTTTTTCAAACAAGTGTTTTTGCAGTAGTATTAGTGGTAGTA GTAGCAGTAGCAGTAGCAGCAGTAGCAGTAGCAGCAGTAGCAGTAGCAGC AGCAGTAGCAGTAGTAGTAGTAGTAGCAGTAGCAGTAGCAGTAGCAGTAG CAGTAGCAGTAGCAGTAGCAGTAGCAGTAGTAGTAGTAGTAGCAGTAGCA TTAGCAGTAGCAGTAGCagtagtagtagtagtagagAAATTATGCCCTTT TGCTTTGCTTCTTATGTTCCTGGGGAAGGTACTAGGCAAAAAGAGGGTAC AGGTATATGCTGCCCTTGAGTGTCCCTTTTTTTACCTTAAAAATCCCACT GAGAATCGCAAAAATCACGAACTTTAAATCCAGTCCCTCTAAGGGTTGTT AAAACAGCTAAATACAATTTCTCGACCCTCAAGTTAAATATTCCAATAAA GGGTTACATAATTCGTAAAAAGTTGGGTTTTTCCTGGCTTTCAGTCCCAT TAAGCTCTGTTTTAGCTCCTCTATGGGCCTAATCACCAAAGGTCGGACGG CACCTTCCCATTATCTTGCAAAACTAGTACTTCTTGTGCTTATGGCttca tctatcaagagttatcaaGACTTAAAATGATTCGGTACTGTTCAGCTTTC AGTTACAAAAAGAAATGGAAAAGGAATATAgagtttaaattttttcaact tcCAAATGAAACGGGATTGCGAAAAATGGCTTTATAACATATCTGAAGGG AAGGTTCTTAAAGATGAGAAAAACTTTTACATTTGCTCGAATCATTTTGA GGAAAGCTGCTTTAAACGAGATTTACAGTTAAATGTTCATGTTGTTGctt gtcttctttttcttctctaGACGGATTTGATAATTAGACAGGACTGTGTC TTTCTCATAAATATTAATTTACGctgatttctgatttctctaTCAATGCC AAAAAATTCCTCCGAGTCTTCTTCTAGGCTGAGTTATTGGGTGAGAATTA ATAACACAGCGAAATCATCGCACAGATCTTGCAGCTCATTGAAATTGTCT TCAGTGTCACTGATCGTTGTACTAGAGGAATCACTAGAACTATTTTCATA TTCCTCTGacatatttttacaatttataaCACTTAAAATCTCACAATTGA AAACTTGAGAGATTGATTTCCTCAGAACTTCAACTTTTGAACATTTTTCA AAAACCCTTTAATCTTTCTCTCTATACATGTCGCCAAATAAAAGATCTTT GATATCCTTTTAAGTCTTGTTTACAGGTTCGTTTATTCAACAATTTAATA AATAATGTAATTTAATGTTATTCAATTCTTCTTTTTTTATTTAATATACT CTGGACATCTTTTCTGCCTGTTTAGTGGACTTTTTACCAATCACATAGCC ACATATATAACAATTTCAGACAGTTTTAGCTTAAATATACTTAGATATAC TTTAGTTTAGATATACTTTGTAGAAAAATTAGATTTTCAAATCTACGTCA CTCGTACCGAGACTCCCATTTTCCGCAGCCTTGCGAAAAAAGCTTAGATT TGAGAAATCTTTCATGCTCGATATCAATAAAAATAGAATCATTTAAAACC TTTTATCTTAAAGCTCAGGACATCTTGACAAACTTGTATACTTTTCTTGG CGCACCCGATACACCTAGCATACCTTCAATCATTGAACCTCGGAGCTATT TGAATGAAAAGAAACGAATAAGCACGGCGATCTTGTACGCGTACCTTTAG CGGTTGCATTTTGAAATACCAAATGGCCAAAAATAATCTTACATACATTT GACCAGTGCATTTAATCCCTAAATATGTTTACGACCATTGTACTATATAA ATTTCATCATTCCTCCCATAAGAACGAAATGGCATCAAAATTTAAATTCT CCAAATAGTGATTTTAGGTAGGGATATATCCTCCCCAGTTCTTCCTCATT CGGGATATTTATCTTTGGGAATCAACTAAGAATAGAAATTATCACTGGGA AATAATTTTTCTTGCAGGAGTTCCAAGAGCATTGTTGTGAATAAATGTCA TCGATTGAGACATTGTTTTGAACCAAATAAAAGATACTTTTGCAATTTTC TAACATCCATACTTTGAAATTTGAGAAACTACGCAAATGTCTTGCTTGCG TGTGGTAAAACCAAAGATCGCCGTGAAGATTGAAAAAGAAGTTTTTTTCT TTTAAAATACATCAAACATAATATAGTGCGATACTGAACTTTTCTAAAAG ATGTCACGAATGTTTGAAATGGTCGTGTCACTATTCTTCGCTTATATCGT AATGGTTTTTTCGAAAGCAAGGCTTAATCCTATTCTTTCACTAACTGGTT ACCTTAAAAGAATAACTTTATGCAAGAACTAATAAATGCGGAACTAATTA AGGATGTACTTAATTAATCCAATTACAATCCAGGCAAACGATAGAACTTG TGCTAGGAAGCGATGCATTCCATTCCATTATATTTTCCGGTTCCAAACTT ATTTTTTCATATTTATCAATTTTTTTTCACAGTTTATTCTTTTCTTTTCT TAGGCACGTTATGCTCGACCTATCAATTTGAAAGAATCACCTGAGACGAC AGATGATATTACTAAAAACTCCATGGCTAATTGAAAATGCGCTATACTGT GAAAGATATATTTTATGTATGGTAATTTTATGTCACATATTTTGTAAAAC AAGATCTGTACTGACATATAGGCAGGTTTTATATGTTATATATGATATTT CTATGTATTTACCACCACAGGTGATTTAAGTCCAATATCAAGTCGTAAAT TGAAAACGTGACGTCTTGAAAACTTCACCAAATTTGGAGCTAAAATGCAT GTCGTTGAAATTTAACTTTGAACAAAAGATTTAAAATTTTAATGACCTAG TTCATAGTTCAAAATTAACAGTTTTCAAGATATCATGTTTTCAAGATTTA TGATATCATCCGGTTATGACGCCAATTTTTACTTTTATGTTGATCATTGA ATCTTGAGGTAGTATTTAGTTAGGTCACAAACCGGATCCTGAAACTACAT ATAATTGATCATTTAAAGGTTACTAAGTGGTTCCCTGGGTACGGGTTCCA TTTATTTACTTTTTGCCATTTAGGGTTTTTCAAAAGTTTGGACACGCCCT AACTCACCTGAGGCGACAGTTCTTAACTGATTATTTCATGTCACATATTT CAGCActgttttaaaaaaagatatacGTAGGTCATATAGAAATTTTTCTT ACATTTGGTAGGTTTATGTACATACCACGACAGTTCTTAACCCTTTGGCT CTATACCAGGTCAAATCTTACCCTAACTAATTGAGAAGTTATGAAAACTG ACTTAGCTTGAGTTTTATAATGAAATTGTGACTGAGAGTCCTCTAGGTTG TATCATCTTGTAAACATGAAAATAGTAAGTTGTGAGCTAGAACTTCAAAT GAAAATAACTCCAGCTAAAGTTCTAAGGCGAAATTCGCCATTTTCCCCTT AACCCTAACCCCCACAAGGATTTGTAAAGAAATACAAAAAACCAGATGAT ATACGCATTAGTAATTTGAAGTTATTATGAGGTTAAAGAAGCCGTTCGAT TCTTAATAATACTTTTTATGAATGCCCTTTGTtgcttttctttattgaaa tgCGTATGCGTGATATGTTCATATTCCTATCTTTATGTTTCTTAActgat gttgatattttttaataaaacatgatttttttaatcaaacatgttttatt tgcaaaacaagagaaaaaacgtactttttaatattttattttgctGAGAT AATATTTCATTgtattttatcagatttt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00041551TCONS_00041551Clytia hemisphaericatranscript
TCONS_00041552TCONS_00041552Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00041551-proteinTCONS_00041551-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002907supercontigsc0002907:5733..12560 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.48 0.49 0.16 0.08 1.94 1.02 1.09 1.43 0.94 0.93 1.07 1.26 0.97 0.86 0.76 1.35 0.62 1.03 1.32 1.29 1.69 1.68 0.66 0.91 0.88 1.03 4.61 3.41 0.84 0.52