XLOC_024805 (gene) - C. hemisphaerica

Overview
NameXLOC_024805
Unique NameXLOC_024805
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002537:14954..18662+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024805 ID=XLOC_024805|Name=XLOC_024805|organism=Clytia hemisphaerica|type=gene|length=3709bp|location=Sequence derived from alignment at sc0002537:14954..18662+ (Clytia hemisphaerica)
GTGAATGGGTGATCGCTTTGGACAGAATCATCAACCAGGTAATTTCAAAA
tgtctgttgtttttttttctgaaatatcGATTTTTTCATTTCGTTATAAG
TTACAAGAGAAATTGGGATGGGTTtagaaaactaaaaaagtttttttttt
gggaaaaagacGTTTCAATATAATACAGTACACTCTCGTTAATTAGAACT
TCTATtaatcgaatctttctataattcgaactaattcacAGCTCCCGTCA
AAGGGAAACCCTTGTAAAGtactctctataattcaaatctttctttaatt
tgacGAAAACTTTTGGTCCCTTGGAGATCGTATTACAGAGAGTCAACTTT
AAGTCAAAAagctttttcaactttttccatGAATAAGTTTCTAAGGATGG
ACTTTAGACTGAGATGTAGTGGTGGGAAAGGTCAATGAagtaaaagcccg
aagggctagaagcggaTCTCCTACGTAGGATTTGAGGCTACTAAATCCTC
CttaagttgcgcggccttgagcagTCCGcatggaaaattatttttataca
aattccagattgaaagtaaagtaaTTTTCcgctagattaaaaaaaatgta
tcactcgaaaacaaagaaaccgctaAAATCAATCCGTTATAAAAAATACG
GCGTATAttctaaggcttcactttttcctgCACGAGGAAGGTTAAacatt
cgcttctagcccttcgggcgtttactttttttggtaaaagtcaCTCTTTC
TATTCAATTTGTATTCTTCATTGTAGCCATTACCATCAAAATCATCTATG
GCGCCACCGGGCCAACCGCCACCATATACGTCAAGAATGGAGTATGAACA
AAATATCAATGCTGACCCTCCTAATAGTAAGTTGGAATATTATTAACAAA
aggttcaaaaataaaatattttctcaataTACAAAAactctgaaaaaact
ttattAGCTGCTTAATAAGGGAAAGGTAGCTCCTGCGAGCCTAATAATAT
atgaaaggttttgttttgaaataagagtgatatcgttttcCTACTCGTca
gttttaatttacaagctttttgatattgaattgatacggatgtggagcaa
gattggtcagaaagaggaaaagaaaaatattatttgcttatatcagcaca
atataacaataggtagacgctgtcctgatatgaaacatgtttCTCTTatg
aacacttatgtaaaaataaaactttaagtATACCCCCATATAACAGGGCC
CACGCCACCGGGGGGGGGGGCAAAAAGTAAAATTTTTGGTTGCGCCTCCT
TAGACTCTATATTCATTGCCCCCCCCTCCACTTTCAATTTTATGGAGATG
CGTGGACCTTCTATAACAATAGGATAAGAAAACATTCAATTACTCACGAC
ACAAATAAAATGAAAGGGTATCAATAAACGGGAACAAAGTTTGTTTGGCA
TTGATTCGTTGATATTTGACTCCAGTTTAATTATTTAATTGCAGATAGCA
GCTCTCGGAATCAAACAACTAACACAGGAGGGCTGCTCACCAAAACACTC
AGCCTCCCCCACCTCAGATGGGACAACCCCGTCCACAGATGGGACAACCT
CAACCTATGATGTATCCACAACAACCACCAATGTATGGCCAGCAACCCAT
GTATGGTTATGGTCAACAACCCATGTATGGTCCCCCTATGTATGGGCAAC
CCATGTACCAACAGCCTGTCTATGTTCAACAGGCTCCCCAGCAGCAGCAG
TCAAGAGGTGGCAGCAATACAGGTAGTCTGCTTCTAGCAGGAGGTGGTGG
GTTACTAGGAGGCTATCTTCTGGGTAGTGCCATGTCTGAGATGAGTCACC
ATCATGGACATAATGACTATGGTGGACATGATCATGGTGGGTTTGGGGGC
GGAGATTTTGATGGTGGAGGTGGATTTGATTTCTAATTTCCTTTATCCTT
CTTATAAATTCGTTGATACTTGTTGAGACCATAGTGTCCTAGTAGGTTGG
TTCCCCTCCCTTGAAAATTGAAAAAAATTCTTCTGCCCCCCCTCCTTTTA
GTTCCCCTCCCTAAGGTTTTTAAAATAATCCCCCCTTGAAATTTTTTTTA
GATTTTTTGCCCATAACGTATAATACTGCTTCTATTCATGTTATCTCGTC
CCCTATATACAAAGAAAAAATGTAAATTGTCACCACCTCGAATATAAAAC
ACTATTACATGTTTTTTTTAGCTTGAAGTTGAACAGATATATTTTATGTT
TTATGTTTGACACCAAAGAACAGAAATTATTTTTCCTCACATTTTTTCTC
CCCACCCTTGACTTTTTGGAGCTATTTTTTCTCCCCCTCCTTTTGATTTA
CCCCCTAGAATTTTGAAAACAATTTTGCTCACCCTTTTCCCATTTTCTGA
AAAAAAACTCCCCCCTTTTAATAGGGGGGGGGGGGGGACACTATGGAGAC
TGGACTTAAAAAAATTTTGGTTTGCCATCACCCGACCCTAGGTTTTGGAG
GTGAGTCGGTCGGTTGGAaaaaggttttattttgacGATTTATGAAAGTT
CAgtttgaatgaaatttgaaCAGCTACAAGGGAATTCACGATTGTTATAA
GGTTTAAGAACGAGACAGACACATTAGACGTtctgatttgaagaaaaaaa
tcttctttaaaattggCAATTAATTTTTTggggtcggcaggtttcgagaA
AGTTTCGGTCGgatgacggcaaaccaacattttttaaattgcAAACTGAT
AAAGAAACTTTCACAAGTACCGTCTTGTACCGTGAACTTCAGACAATTTT
TCTGGAGAAAAAATCCGAAATAATTACCCTTCTGaaatatgtttaaaaaa
tgCTCTGAAATACagtagtctctttaactcgaacccgcacggagaatatt
aagcagatattcgacaagaaaaatcggatatcgaaaattatccagtcgag
cttgatgatattcgacGGAGCAAAGCTGAGTCGAATATCATTAAACCGTT
TTGCTTAGAGGTGGACGATAATTATATTTATTTAACATTATATTTATTCA
AGttgaggaaatttcgagttatggagtaatgTTTGTAAATCATTGTtcac
tgaagggaccataaaactttcTTGAGCTAAGGAGACAatcgagtaataga
ggttcgagttaaagagagtcagaaaactatttttatttgCATAGACTGTC
TTCTATTCATACGACATAATGTAACGAACTATGTTTTCAAAACATCCAAT
GAAGTTTGATATAATCTTGGCATTTATAGATCCAGGGTTTCGTtcttttt
aactaaaatatatttatcaaaaccgaaatttttaaacttttcgtattttt
tttgtagattttgtagTTTTAAAATTAACAACTTCAAACTCCTAGCCAAT
TTAAAGCTCCAAAGGgatagaaagaaagaagaagaagaagaagaagaagc
ctTTCTTTTTTGCCGTGTGAAAATTATAGAtccaaaatttgactttttga
taGATTCTTTACTCTTTTGAacttgtaataagaaattttaaagctttaaa
atttcttattacaagtTCAAAAGAGTAAAGAATCtatcaaaaagtcaaat
tttggaTCTATAATTTTCACACGGCAAAAAAGAAAGGCTTCTTTAGTCAT
CCCTTTGGAGCTTTAAATTGGCTAGGAGTTTGAAGTTGTTAATTTTAAAA
ctacaaaat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00040715TCONS_00040715Clytia hemisphaericatranscript
TCONS_00040716TCONS_00040716Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00040716-proteinTCONS_00040716-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002537supercontigsc0002537:14954..18662 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.87	6.02	10.09	9.76	3.27	2.18	2.02	2.3	4.35	2.66	9.48	7.63	4.76	7.65	4.95	5.72	3.06	4.05	5.15	7.66	6.02	4.61	7.52	6.59	4.86	6.53	9.3	8.19	5.25	4.34