XLOC_024639 (gene) - C. hemisphaerica

Overview
NameXLOC_024639
Unique NameXLOC_024639
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002447:86..3380+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024639 ID=XLOC_024639|Name=XLOC_024639|organism=Clytia hemisphaerica|type=gene|length=3295bp|location=Sequence derived from alignment at sc0002447:86..3380+ (Clytia hemisphaerica)
TTAGAAATGGTTGCAATTTATTAAAGTTAGAGCGCAGAGGATACGATTAA TAAACAAATGATCAAAATAAAACTTGCCCAGTAAATCTAGTGTCTGTAGT AGTTCCATGACAAACTTGACTGAGTCTGAATCACACCTATTGTTAATTGG AATAAAAATTAGTTAGATAAAAATTGATAAGGTTGTCAAAAGGTAGAAAA AATTGCTTAACCATATCCACAACACTGAAGTAAAATTGAACTTTATTTAG CTTGTCCATCACGACATCGTTCTTCCAAAATTTAATACCAGCCAAGATGA CAACATGTCCAAATTTATTCTTTAACCTgtaaaaagaatataaaaatcAT TAGAAGATGAGCCATTTATGTCTCccaaaaactctcaaaacgaagaGAAA TCTACACAACTCAGTAACTACCAAAGCTTTAGAATTCACCAGTTACAGTA CCATCTCAGACAGTGCAATCAATTTCAATTCCCTCACCTGTTGGTAGTAT TTTATGAATTACACTGTATTGTACTGACATTGTCCACACAGAGAAATGGG ATGgaatagaaaaaaatctttgattaGGGTTGGATGTTCATAAAAAGACG GCTCTTCCTAAAAATTGGATCATAAAAGTGGATTTACGTTTATTCTTTTT CACGGATTACTATCCAAACTTGCTTTTaatgtaaaaaattttaaaaacat aaatagcTGGTTGAGCTtcgggaaaaaaaattcttacttTCTCGCAGTTA TATGATAGGAAATGCTGTATAACGGTTAGCTCTGTAAAATTGGGTCAAAA ttgtttttcgtcaaaaaacatacaaaacaTCCAGTGGATCCCTTAAAAAA TTCTCTCTGCTATTTTATTTTGTGGgtgtttctggcaaaactaagtACAC CATAAAATTTTAGTAGTTGAGCACTAGGCAATCTGCTTTTCCAAGTCCAT CACAGGGGGGGGGTGGTTGAAAAATTGAgaggcaaaatatttttttctaa ttcctggattttcaatacaaaaacaattgaaaaatcctggatttctaata caaaatcaaatttttggtggaaaaatctctttattcaaaattttaaaaat tgtagAATTTCCAAGCACTTTTAAAATTAACTGGATTTCCAAGTGCTcct tttatctgaaaattcctGTCGTCCATCCCCTgctatacaatttttttctg gaagagcccaatttctTTTTGTGGCGTTCCAAAAAAAACCCTttcccccc cggggggggggggggttgaaaaattgagaggcaaaatatttttttctaat tcctggattttcaatacaaaaacaattgaaaaatcctggattttcgaaac atttttcaaatttctcaggatttccaattgaaaaaaaaatccaaaaaacc ctttccccccccccccccggggacccaaagcttttttggatttttttttc atttggaaattctgagaaatttgaaaaatgttttggaAAATCCAGGATTT TTTCTCGTTATTTAGTCATATGTAtcggaaaatccataaaattggCTCCA TTTTCTTATTAAGTAttagaaaatccataaaatttgctctattttctata tttccaagtATCTGATTTAAGtaagtgttttttacacttttggcaaaaac gtgaaaactaattttcgtCAAAGACGGTTTTTTCAGTCTAAAATCACGAT TCTTGAGTATTTTGGGATGAAAACTTCCAATAAGTTGCGAATTATAATTT CAAAtctgttgaaattttttcctcGANNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATtagattttgtgt ttttctcatttgaaattGTTATATACAAATTTCAAAGTTCTAAATACGAT TTCCTTACACCTTCATccctgaatttcgaaaaacaaaAGCAAAGAGCACT TTTTTATTGCTTATTCCGTCACAAAAGTCAGTTAAAGctaaacataaatt tttaaggttttatcaaaTGATTTTGAGTCCTANCTTAGTTTTTGTGCTAT TTTGTTTTAGCCGTACAATATATGTTTATTGACGAGTACAATCCCTAATG TCAGTTCCTGTGTGGCATTAACAGGCAATGAAAACCAAGACCAAATGGTA CCACAAAAGGAAATGTTCAACATTAAACATAATCCAAGGGCATGCACTGA GTAAAAATTCCAGGGTTAGAAATGGTTGCAATTTATTAAAGTTAGAGCGC AGAGGATACGATTAATAAACAAATGATCAAAATAAAACTTGCCCAGTAAA TCTGGTGTCTGTAGTAGTCCCATGACAAACTTGACCGAGTCTGAATCACA CCTATTGTTAATTGGAATAAAAATTAGTTAGATAAAAATTGATAAGGTTG TCAAAAGGTAGAAAAAATTGCTTAACCATATCCACAATACTGAAAGTAAA ATTGAACTTTATTTAGCTTGTCCATCACGACATTGTTCTTCCAAAATTTA ATACCAGCCAAGATGACAACATGTCCAAATTTATTCTTTAACCTgtaaaa agaatataaaaatcATTAGAAGATGAGCCATTTATGTCTCccaaaaactc tcaaaacgaagaGAAATCTACACAACTCAGGAACTACCAAAGCTTTTAGA ATTCACCAGTTACAGTACCATCTCAGACAGTGCAATCAATTTCAATTCCC TCACCTGTTGGTAGTATTTTATGAATTAGACTGTATTGTACTGACATTGT CCACACAGAGAAATGGGATGGAATAGAAAACAATCTTTGATTAGGGTTGG AAGTTCATAAAAAGACGGCTCTTCCTAAAAATTGGATCATACAAGTGGAT TTACGTTTATCCTTTTTGACGGATTACTATCCAAACTTGCTTTTAatgta aaaaattttaacataaATAGCTGGTTGAGCTTcgggaaaaaatattctta ctttCTTGCAGTTATATCATAGGAAATGCTGTATAACGGTTAGCTCTGTA AAATTGCGTCAAAAttgtttttcgtcaaaaaacatacaaaacaTCCAGTG GATCCCTTAAAAAATTCTCTCTGCTATTTTATTTTGTGGGTGtttctcgc aaaattaagtACACCATAAAATTTTAGTAGTTGAGCACTAGGCAATCTGC TTTTCCAAGTCCAtcacaggggggggggggggacgaaAAATTGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00040509TCONS_00040509Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002447supercontigsc0002447:86..3380 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.14 1.27 1.22 0.84 0.09 0.22 0 0.08 0.1 0.35 0 0 0 0 0 0 0 0 0 0 0.09 0.07 0.64 0.86 0 0.25 0 0 0.74 0.07