XLOC_024499 (gene) - C. hemisphaerica

Overview
NameXLOC_024499
Unique NameXLOC_024499
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002393:22608..30203+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024499 ID=XLOC_024499|Name=XLOC_024499|organism=Clytia hemisphaerica|type=gene|length=7596bp|location=Sequence derived from alignment at sc0002393:22608..30203+ (Clytia hemisphaerica)
CCTCGACGGCGGTCTGGTTACCTCGACGGCGGCTTGGTTTCAACCCTAAA AGTGTCTCAGGTCGGTTCCTACGCAAGGGGAGTCACTCCTTTGAGGGAAT TTCGAACGGCGGTTCGGTTCTCTCAGAAACCTTGACGGCGGTCTGGTTTC AACCCTAAAAGTGTCTCAGGTCGGTTCCTACGCAAGGGGAGTCACTCCTT TGAGGGAATTTCGAACGGCGGTTCGGTTCTCTCAGAAACCTTGACGGCGG TCTGGTTTCAACCCTAAAAGTGTCTCAGGTCGGGTCCTACTCAAAGGGAG TCACTTCTTTGGTTTGAGGGAATTTCGAATGGCGGTTCTGTTCTCTCAGA AACCTTGACGGCGGTCTGGTCTGCAACCATTGTCTTGTTTTGGGGATACC TTCGGTTGGgactaaattttccccaaaactgatTATGGGTTAGCCAAATA TGTGAACGCCAAACTTAATTGAAAAATGTCTCAATCTATTCTACTCCCCT CATAACAGATGaacgaatttggaaattaaatgtttatttaACAATAAGTA GTTAAATCGTAGTTTAATTTTAAATCGTCTAAATCACTTATTCCGCCTGC GATACTACCGGGGCGTCCCGCCTGCGAGTAGCCTTACTTCTCACTTGGTT CCGTGCGATATTGGCTATACTCTCAAAGCACAAACAAGGATTAAGGTGGC GGTGTTCAAGTCTCAGAAtttttttacctccctcccGCCCTACAGATATT GGTTGCCGGCAACCCTATTTCTAGTTTATGTTAGTTTATCACTAGCAGGG gactaaattttccccaaaactgatTANNNNNNTGATTATGGGTTAGCCAA ATATGTGAACGCCAAACTTAATTGAAAAATGTCTCAATCTATTCTACTCC CCTCCAAACAGATGaacgaatttggaaattaaacACAGATTtaatatgaa aacaaaaagaaagatttaatCATGCAAAGatctagcccggggtccactca aagctttttttatagactgatGACAGGATTAAAGTGGCCCAGTAGTATGG AGATAATACACAAAGACGGGCAGAGATAGTTATTTTTGAATACCGCAGAT GGGTAGGCTATCGCCATTATTAGCTGTAAACCCTATGTAGGGTTATTTTC TCCCTGTTTGCTATTCTTATAAACGGGAAATATATATCGTTTTAATTTCT AGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN GAGAGAAAGTTCATTTGGCATTTTAGATGGCAAAAACTTGCACCGTATCA AAATAggaggaaaaaacatttttttgaaactttactgatgacgtcactat ttatgTCAACAATTATGCTAAAATCATGTTGTATCTGCTGACAAGGATAT CTGTACAATCGGTGCCGaaatttattggaaattttggatatcttaacgtt ttatagaattaaaagttcgggcaagaattgcagtttcagtgaTTTCACTG TGTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNAAAGGCAAAAGAAATGAGCAAAGTTGGCAAAGATTCTTTGA AACTCACTTCAAATACGTCACTCATTCATTTGCAAAacttttgagatgtt ttcttaaatttttgatgtTTAACACNNCAACCACCATTCACTAGGAGCGA AAGTTCATTTGGCATTTTAGATGGCAAAAACTTGCACCGTATCAAAATAg gaggaaaaaacatttttttgaaactttactgatgacgtcactatttatgT CAATAATTATGCTAAATTCATGCGGTATCTGCTAACAAAGATATCTGTAC AATCGGTGCCGAAgtttattggcaattttggatatcttaacgttttatag aattaaaagttcgggcaagaattgcagtttcagtaatTTGTTTTATTGGA TTCTTTGATTTGAGAGGGGTCGAGCGGCTTCCAGACAAGATGAACCTACA TGAAGTCTTTCAAgcttaaatttgaaattgaggATTTTCCCCATGTGCCA CCACAAAAGGCAAAAGAAATGAGCAAAGTTGGCAAAGATTCTTTGAAACT CACTTCAAATACGTCACTCATTCATTTGCAAAacttttgagatgttttct tAAATTCTCGATGTTTAACAAAATAGTTACCTGGTTCGACGGGACAAGTT TCGGTATTGCAATGTTGTGATTCCGATGCATCTCCAGTACAAGTATCTCC TCCGTTAGCAGGTGTTGGATTTGTACAAGTTCTTGACCGTGCTTGTGTCC CTGTACCACAGGTTGCAGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNCTGTACCACAGGTTGCAGTACATGCATCCCATGCTGCCCACTCAGTC CAACCACCATTCACTAGGAGCGAAAGTTCATTTGGCATTTTAGATGGCAA AAACTTTCACCGTATCAAAATAggaggaaaaaacatttttttgaaacttt tgatgatgacgtcactatttatgTCAATACTTATGCTAAATTAATGTGGT ATCTGCTAACAAGGATATCTGTACAATCGGTGCGGAAatttattggcaat tttggatatcttaacgttttatagaattaaaagttcgggcaagaattgca gtttcagtaatTTGTTTTTTGGATTCTTTGATTTGAGAGGGGTCGAGCGG CTTCCAGACAAGATCAACCTACATGAAGTCTTTCAAGCTTAACTTTGAAA TTGAGGATTTTCCCCATGTGCCACCACAAAAGGCAAAAGAAATGAGCAAA GTTggcaaaaattctttgaaactcGCTTCAAATACGTCACTCATTCATtt gcaaaacttttttgagatgttttcttaaattcttGATGTTTAACAAAATA GTTACCTGGTTCGACGGGACAAGTTTCGGTANNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNTACCACAGGTTGCAGTACATGCATCCCATGCTGCCCACTCAGTCC AACCACCATTCACTAGGAGCGAAAGTTCATTCGGCATTATAGATGGCAAA AACTTTCACCGTATCAAAATAGGagggaaaacatttttttgaaacttttc tgatgacgtcactatttatgTCAATAATTATGCTAAATTCATGCGGTATC TGCTAACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNGGTCGAGCGGCTTCCAGACAAGATCAACCTACATGAAGTCTT TCAAGCTTAACTTTGAAATTGAGGATTTTCCCCATGTGCCACCACAAAAG GCAAAAGAAATCAGCAAAGTTGGCAAAGACTCTTTGAATCTCACTTCAAA TATGTCACTCATTCATTTGCAAAACTTTTTAGatgttttcttaaattctt GATGTTTAACAAAATAGTTACCTGGTTCGACGGGACAAGTTTCGGTATTG CAATCTTGTGATTCCGATGCATCTCCAGTACAAGTATCTCCTCCGTTAGC AGGTGTTGGATTTGTACAAGTTCTTGTCCGTGCTTGTTTCCCTGTACCAC AGGTTGCAGTACATGCATCCCATGCTGCCCACTCAGTCCAACCATCATTC ACTAGGAGCGAAAGTTTCATTTGGCATTATAGATGGCAAAAACTTGCACC TTATCAAAATAGGagggaaaacatttttttgaaacttttctcaTGACGTC ACTGTTTATGTCAATAATTATGCTAAATTCATGCGGTATCTGCTAACAAG GATATCTGTACAATCGGTGCCGAAGTTTATTGGCAATTTTGTTTATCTTA ACGTTTTATAGAATTAACAGTTCGGGCAAANGTCCAACCACCATTCACTA GGAGCGAAAGTTTCATTTGGCATTTTAGATGGCAAAAACTTGCACCGTAT CAAAATAGGaggaaaaaacatttctttgaaACTTTTCTGATGTAGTCACT ATTTATGTCAATAATTATTCTAAATTCATGCAGTATCTGCTAACAATGAT ATCTGTACAATCGGTGCCGAAGTTTATTGGCAATTTTGTTTATCTTAACG TTTTATACAATTGAAGGTTCGGgcaagaattgcagtttcagtaatTTCAC TTTGTTTTATTGGATTCTTTGATTTGAGAGGGGTCGAGCGGCTTCCAGAC AAGATCAACCTACATGAAGTCTTTCAAGCTTAACTTTGAAATTGAGGATT TTCCCCATGTGCCACCACAAAAGGCAAAAGAAATGAGCAAAGTTGGCAAA GACTCTTTGAAACTCACTTCAAATATGTCACTTATTCATTTGCAAAactt ttgagatgttttcttaaattcttGATGTTTAACAAAATAGTTACCTGGTT CGACGGGACAAGTTTCGGTATTGCAATCTTGTGATTCCGATGCATCTCCA GTACAAGTATCTCCTCCATTAGCAGGTGTTGGGTTTGTACAAGTTCTTGT CCGTGCTTGTGTCCCTGTACCACAGGTTGCAGTACATGCATCCCATGCTG CCCACTCAGTCCAACCACCATTCACTAGGAGCGAAAGTTTCATTTGGCAT TATAGATGGCAAAAACTTGCACCGTATCAAAATAGGagggaaaacatttt tttgaaacttttctcaTGACGTCACTGTTTATGTCAATAATTATGCTAAA TTCATGCGGTATCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNTCGGGTTTCAACCCTAAAAGTGTCTCAGGTCGGGTCCTACT CAAGGGGAGTCACTTCTTTGAGGGAATTTCAGACGGCGGTTTGGTTCTCT TAGAAACCTTGACGGCGGTCGGGTTTCAACCCTAAAAGTGTCTCAGGTCG GGTCCTACTCAAGGGGAGTCATTTCTTTGAGGGAATTTCGAACGGCGGTT CGGTTCTCTCAGAAACCTTGACGGCGGTCTGGTTTCAACCCTAAAAGTGA CTCTGAGGTCGATGTGTGAGTGTATTGTGTGATATAGGTTTTATcgtttc ctagggatttttctaagatttttaAGTTACATTCATTGTATTACTTTAGA CTGGAAttatttaattgaaattttaaggGAATTTAGGGGTACCTGGTTCC CAGATAGCTAGGTGGTAGTTGGGTTTCAGCCCTCAATATGGTGGGCTGGA AATCTGGCAAGATCATCATAGTTTGTATTATATCGCAGGCTGAGTTCGTT TTCTAATAGACTATGACAGGTAGTTGCTTGGATAACGTGGTACAGGGCAA GTTTTTTTCGTCACTACCTCTCACAACGCTCAGTGCTTTGGTGGCGTGCT GCAGGCAcaagttatttatttttttgtgtttttctttttctgtaacttct tcatttttaatggTACTAGGTTATTGGCAAGTAAGAATATCAATAGAACT ACCAGTGGCTAGATAGTTGTATATAGTCGTTTAATTAATTTAGATTTCAT CATATTTaggatttatctttttttttttattggttATTTCCTCCCTTTTA TTGTTACGTTGTCTGGTCAGTCTGCAACCATTGTCTTGTTTTGGGN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00040335TCONS_00040335Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002393supercontigsc0002393:22608..30203 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.15 0.47 0.42 0.37 10.38 5.09 10.54 10.29 2.95 3.33 3.4 2.89 3.91 3.33 2.81 2.55 3.61 3.49 1.73 1.58 8.82 4.08 2.41 2.98 9.55 8.32 6.01 3.8 2.44 3.49