XLOC_024433 (gene) - C. hemisphaerica

Overview
NameXLOC_024433
Unique NameXLOC_024433
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002367:7037..16256+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024433 ID=XLOC_024433|Name=XLOC_024433|organism=Clytia hemisphaerica|type=gene|length=9220bp|location=Sequence derived from alignment at sc0002367:7037..16256+ (Clytia hemisphaerica)
ATAGGTACACCAAGATCCTTGAAGAAAGTCTCAGTCAATTTGAATAACAT GTTTGAAGATGTGGACGATGAATGCACTATAGTACCAGATCAATCAACAG CTTATCAAACTGCTCTTGAAGATCAGTCATCGGCGGTCAGTAATTATATt tcagtaaaaatcaaaatagctagttttttgttctttttatgAAATGGAAA TACATATTATGTAAAGTGAATTCAGAAAGAACAAAACAGATTCTTTCTAT AAAATggttaatcggattaaattttgcgagattaaatttcgcgagtgAAA Ataatcgcaaaattttctggatttaattttgcgaatgagcctgaaaacag ctgaaaaatagccgaaaaatatctatttttttgccaaaatggAGACTTTG GACTGGTTTCTCCACCAAAAAtgctatttaaaaaattttgtagtggattt aatttcgcgagtcaggaatctcacgcgtttttgcgagttttaatttcgcg aaaatggcgaaaattcacgaaatcaaaaatttaatctcccgaaagttaat ccgattaaagtagatAGAAAAATGTTATCTTAAACTGATCTGAaatcaaa tatatattttctttcaatcaaaagattATTAAATCAGAAcactttctgtt ttgtttttttagacaCTCTACACTGCAATATAGAGATATACCTATTATTG TATTAACCAAACGAAATTATTTTTCCCGTCCCAGCTTCTTTCCTTGCAAT CCTATTCTGCATCCCAGAGTATTggaaaaaaatcagatttttttgtTAAC AAGGTAgtgtttcatttttatgttaTGGAATGTATTGTCAACATTTTTTT GAACCTTAGATGCATTCAAGTCTCATCATACAAGAAGAAGCCAATAAAGG TATTGACAGTATCAAGCAAATGGAATCACTCAGACATCAAATTCATTCCT CTTTTTACCCAAACCACAGAGGTAAGATTTGATACAGATATTTTATATGA TTGAACGATCGGCTAAACTATTGATAAAAACTAGCTGTGCCAGAAGCCTT AGACTACTTTCagttcttttcttatttttgctcAAGAGTGTTCTAGTctt gattttgaagaaaaaaaatgttgcgAATGTCGCTTATTCTGATCTCTGTC GATTAGCTCATCAAAATCACATAGCATCTGCTAGCAGCTTATTAAATATG TTCATTTTTATatagttctttttcaaaattttagaaatctCTCCAGGAAA TCTGTCAGATACATCGAGTGTTGATACGATAGCATTGTTACGATCTACTA TTTCACTACCATCACCGGAACTCCAGGTTTGATTTTAGTTTATTTTGTTT GGTCTGCCAAACATAAACCATCTTCGACTGGAAAATGTTTTATTAGTGTA TGTTCTATggagtcttaaaatgttctactTTTATTGAAAGCTTATTACAT AAGAAAGATTTTCTGCTTACAATCCATTTTAAACTGACTCTTCTTATGAC TAAAAATAGATAATCCAAACCCCCTTGTTGAGGTGGGACATCAAGGGATA GGTGTCACAGTGTCCTCCCCCCTTTAAAAGATGGAAAAGATTTTCAGGCT TCAAAGCAGTAAAATATAGCATATTTAtgcattttttatcaaaacaatgt AAAAACATGCCTTTCTCTGAGAAATGGCTCAATTTTAAtcctaaaaatgt caatttttaggcaaaaacaCATGAAATAGGAGACTTTCAgtcttcgaaaa ttttttcgagaAGGGGGGGCAAgaggtttttcaaaaatctagggGGGTTT GAAATGGGGTTGGGGGGCAACcagaatttctcaaaatctcAACCCACTAT GGGTGTCAGGAAAGGATCGTTGTCAGTTGGGAGCTTGTGTTGTTTAGGTG AATTGGGAGGAagtaattatttatttttaatagaAATCCCTTGATAATAA AGATCTTGGGAAGTATAAAAAATTAGCAAaacgatgaaaaagaaaaaaag tataaattaatTTGATCAATAGCACATTTCTGTCACGTTTAtaattattt tccaattttatgATCTTCAGCTTGATGAAAATGGTATTCTGATAGCATCT ATGAACAATTTGAAAAGTTTGTACCACTCACCATCGAGTATCCTGGATTC TTCACTTGCAGCTGAAAAcaccattttgaaagaaaacattgaaaaagagA GACTTAGGCGAAAGGTTTATTGatatgaatcaacggatcctgcactaatg tacttcccagttttctcaaaggtaacgaatcgagtggggattgaacccac gacctctcgcttgccgggcgaaaactgggaagtacatttagtgcaggatc cgttgattcattacccataagtaatacgcacttgatttcacacagtttat tgatatattttatcaatttgaaataatttgttTCTTTTGGTATACTTCTC ACACAATATATATTACTTTCctgcaatatttttatattcGAGTTACTTAC TACTTTTGCCCAATATTAATAGGAGAATCCTAGAATTTTCGTTGCTTGGG GTTTGTATTTTCAACTGCAGACTTTTTTTCCAACTTTCCTACCTTATTGC TTCCAGGCTTTGGATAcgctctttttcttttataagaacttagATTTATA GGAATATTAAGACTAtaagaaattgcaaaaaaatgaaaacaatttcTTTA GAACAATGCAGAGCCTTGAATTACttaatttcaatcaatttaggggtcaa agtagtaaaaatgtGTATAAAGCCTGCTAATTGCTAATTGCTCTAATCGA TTACTAATTgctcttatcctgttcttattatAGATAAGAATAGGataaga acaatacgaggctcaaaataccaaaaaataagaacagccctGTCTCATTA GAAATCTActgcttcttataaaaaattgcaTTTACTTTTAACCGCTTTTC ACTGCTTTTCATCTTCTTCTATTTTACAGCATTGTGAAGATCAAATTAAG ATACTTCAACAAAAGGTATATAATTTAAAGCAATAAATTTATCTAAGAAT CGATGAAAACATTTGAgctatttgatatttttttacgaAGTTCGAACAAG ACAGAATGCACTTTCACTAGAGCAGTTACACTAGAAATGTGCGAGAATTT CACTTTAGTCCTCATCATCAATCTAGTAGTATTTTATCAAACTGAGGTCA ATTGGTAGATATACGCGTTTTCACAACATAGTGGACTGTGCTTTGTTTTC CAGCTTCTGGATAGCCAAGAGCAACTAGCTGTAAGTGTATCGACAGATCG GAAAAAACAAATCATGATAGAACAATTGGATAATGTAAGTGTTATTCTCT TTAGATTGGTGCAAACCCATCCAGTATTTGATCCaacatttgaaagtttt tttaatgcTGGATGAAAATGTTGGACACACTTGCGTTGCGTcaaaaaatc taacttttttaggaaatttaggGGAAAATATGTAAACTTTCCACCCAACA TTTCGTTCAACAATGGTTTGAAAATGTCGGATCAAATGTTTCATgcattt gcgccggcctttaCTTCTAGACAGTTATCTCAAGACGCATCTACATTTTC ATAAACTAGAATGGATCTCGAGTGTtcctagcctgttagacgaaaaccac TTTTTTATCGCgttttaacaaagaaaaaatttggtttgtgggaaggtact ggctagaGTATTCCGTGTTTTGTGCATAAACTTAAAAATTAGCGCCTGGA AAAATATGTAAGAGTTGCATTTAAGGGGatcaaataataacaataatagt TTCAACTTCGATTCTGTAAACTCTTTCAAACAATAATTAAAAGTTCGAGA TAACGAGCATGTGCTGTGACAGCAATAGTAAGATGCAACGATACCTCTAA AAATAgacttgatttgatttttttgtttttgtagacTCTGGCAAACGTGG TGGAGGGATGGAAAAAGAAGGAGAGCTTACGAGATACAGCGTACAAGCGC GTTTGTTCGGAGAAAGAAACATTAGAATCCACTGTGCAGAGGCAAGAAGA GGTACGGAGAGTTTTAAATTGGCTCGGTCATCGGCGACTTTTTGTTCGAT CATTTATTAGCCTTCAACCAGCCTTTACTGACCCATTTCATTCAACCAAA TTTATCCTACCTAAATTTAAAGTCGATAAAATTGGATGCCAAGAGAATTC TTTTTGAAGGCCggactccactttcgcgcgaaatgggcgacagttttttt tcttaaccttttttgcctgtagaaaagattacgtcataaaaaaagtttcg cgcgaacaaaaaaaaattgaaggaagttctacttttttcatccgttacgt caatttctaccaatggaattgcttcattttcaaCCGATCAATAACCttac aaaaacttcaaaaaagttttcgctcatgtcgcgcgaaagtggagaccggc cttaaagaTCTGACATCCGTAGAGTGCAGAcgtgtcaaaaatttttggcg CGTAAAAAGTAGGCGTTTTGTTTCTCGAGCCATTTTTTTACAATGAATGT GACAACAAGAAAGCAGCAAAAGAACATCGAAGAAGTACTTCAAGATATAC CTTTATACACTACTACACAAGATtctccaacacaaaaagacacTCAAGAC ACCTCNNNNNNNNNNNNNNTGACAACAAGAAAGCAGCAAAAGAACATCGA AGAAGTACTTCAAGATATACCTTTATACACTACTACACAAGATtctccaa cacaaaaagacacTCAAGACACCTCACCACACCAAGAAAAAGACTCTCTT CAAACAAAAGACACAGACTTTGTGACAAGTCCTGGTGGTGATGTATCTTA TTCTTTTTCTCAACCTTATAATCTTCATAAATCACTCGAGGAGGAACATA TCGAGGGGGTTACACTTGAAATGATCTTTTACGAAATGAGGGTTATAAAG TATGACATTGCATCAAAGATAGAGAGTGTAAAAGAAGATNagttttttca ttgttttcatggGATCCATGAAAATTACCTATGGACTGAGCGGAACACAG GAAGGAGTGGGGATTCATCATCTGACATCCGTAGAGTGCAGAcgtgtcaa aaatttttggcgCGTAAAAAGTAGGCGTTTTGTTTCTCGAGCCATTTTTT TACAATGAATGTGACAACAAGAAAGCAGCAAAAGAACATCGAAGAAGTAC TTCAAGATATACCTTTATACACTACTACACAAGATtctccaacacaaaaa gacactcaagaccccgggggggggcactgaccttgacgagcgacggggac gtgccgctggagtttcaaaagtcgatcctgtcagaaatgaaatttgatga aaaatagaccctgtcagaagaaaaattcgatgaaaaacctaccctgtcag attttACTGTGAAAAACctataccctgtcagattctaccctgaaaaacct accctgtcagattctatgttaaaaacctactctttatatgcgtttttcgc gtttttcgtaaaGTATAACGTGATATCAACATTTCCAGGCTATAAACTAC AACATTGCATAAACATTAAACCTCAATACCTGGAAAACCGACCAAAAGAA TCGACGACGAGAGTTATGAAATTACAAAGTAACATATCTTTAATATGATT CAAAATCATCACTCTCTACttccacaaaatgtgtttcaAAGCTAGAAAGG TCATACAATATTATAGATTTACAGGAACAAATAGAacgctaaagtttcaa aaaacgtaataacgaaCGTAGTTAAATTTCAGATATCCGTTTCCAGGATT ACCGTAGGATCACATAAAATTCCGATTCCCGCTCTAGCATTACTGGCGCT TTTCCGGGATCATTCCGCTAGTTTNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNCTCCAAAATCAAAACTTGGAGATGAGAAGAGAACTGGACGAA CTTAAGCAGGAACTTTCTTCGAAAAGCAAAATTATTGACGATTTGAGAAC TGAACTGGATCCAAGTTGGGAAAGGAAAGGTTGATTTGGACGACGTTAGC ACAGTAGAGAGACAAAACAATGAACTTCAACAATACATAAGAAGGAATAA TATCGAAATTGCGGGTATCCCTGACTCTGTGAAACAAAACAAGTTAGAAT CGAAAGTGATCGAAATAGCTAAAGCCGTCAACATTGATATTCCTCCCAAC GAAATCGAAGCTTGTCATCGCCTGttccaaagaaaaaatcaaaaaggtcC AAAGCGCACAATAGTGAGATTTGTAAACAGAAAACTTGCAGAAAAGTTAA TCAAAAAAGGCAAAGACTTCAGTAAACGTGAGGTATTTGAAAAAGCAGAT TTGACAAATAAAATTTACATTGATAATaacctttgcagttactacagaTT TCTCTGGGGAAGAGTTAAAGCGTTGTATGGTCGTAATGCTATTGAATCGT TTTGGGTGTTTAATCAGGTTCTATTAACTTGAGATTTAATGATGACACAG ATGAAGTCTTGAAAGTAACACATTTAAATGATTTAATTGAATTCTTTCCT GATCATANTCGTAATGCTATTGAATCGTTTTGGGTGTTTAATGGTTCTAT TAACTTGAGATTTAATGATGACACAGATGAAGTCTTGAAAGTAACACATC TAAATGATTTAATTGAATTCTTTCCTGATCATAAAGATCTCTTTGtttct aaataattttttcattctGTAGCGTTTCTTATTTATATCTTAGTTTTTGA ATGCTCTGTTTTTTATTATACTTTGGCTCGAGAaacatttctcttttgca cACTGATTTTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA CTTCATAATCTCAATCATAATTTTAGCATTCTCGGTATCAGTGAAACCAG ACTCAAATCTTCTATCGAAAACACTGAACTTTCTATCAACGGCTTTAAAT CCTTTGATACCCCAGCCATCTCATCAGTTGGGGGAACTGCTCTCTTTATT TCTAACTCTCTCAAAAGCAAACCTCGCACAGATCTTTCAAAGATGTGCAC TCAGCCTGTGGTAATCTTGAGTCAACTTTTGCTGAAATCGTcttaaaaaa taggaaaaaactATATCGTTGGTTGCAACTACAAACATCCAGACCTTGAC GttgatctttttaataaaaattttatatcTCCTTTGCTGAAGAAAGCCTG CCAAGAAAgcaaaaatcttattttattaGGCGATTTCAACATAGATCTTT TGACTTGTGACTCTGTAATCTCTCACTCTAAATTTCTTGATATTCTTGGT GCTTATCAGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAAGTT CGTTCAAAAATTCCTTTTACGCGTCATCATTTCTCAGAGTGGCTAAAGAA CGAAAATCGAAATGCTAATGACTTTTTCATTGCTCCAGCTTCAAAACCAT CATGTCATCAAAACTCTCATGTCTCTCAGTGAAAATAAGGCAACTGGTCC AAACAGCATCCCGTATCGAATTATTTCTTCCAACTTGGACACGCTTTCTT CTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGTCAGCTG AAAGAAGCGAAAGTCATCCCtgtcttcaaaaacaaaggttCTCCATTCGA TGCTGAGAACTATAGGCCAATTTCTCTTCTTTCTAACATTGataaaatct tccaaaaactcATGCATTCACGACTGATGAACTTCCTCGACCAATCAAAC TCGATCTACCCATTACAGTTTGGATTTTGATCAAACCACTCGACTGAAAC AGCCCTTCTCTATGCTATCAACAAAATATCAAATGCTTTGAATGAAGGTA AGTATGGATGCTCTATTTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00040258TCONS_00040258Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00040258-proteinTCONS_00040258-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002367supercontigsc0002367:7037..16256 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.22 18.37 9.79 6.81 15.27 11.64 9.54 7.45 5.2 7.04 5.6 5.85 5.06 4.91 4.9 5.81 6.68 8.11 3.29 3.8 4.26 4.1 11.24 12.52 20.45 16.52 2.66 1.36 9.94 12.51