TCONS_00040258-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00040258-protein
Unique NameTCONS_00040258-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length242

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00040258-protein ID=TCONS_00040258-protein|Name=TCONS_00040258-protein|organism=Clytia hemisphaerica|type=polypeptide|length=242bp
IGTPRSLKKVSVNLNNMFEDVDDECTIVPDQSTAYQTALEDQSSAMHSSL
IIQEEANKGIDSIKQMESLRHQIHSSFYPNHREISPGNLSDTSSVDTIAL
LRSTISLPSPELQLDENGILIASMNNLKSLYHSPSSILDSSLAAENTILK
ENIEKERLRRKHCEDQIKILQQKLLDSQEQLAVSVSTDRKKQIMIEQLDN
TLANVVEGWKKKESLRDTAYKRVCSEKETLESTVQRQEEFGF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_024433XLOC_024433Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00040258TCONS_00040258Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 153..180

Blast
[Close]
BLAST of TCONS_00040258-protein vs. Swiss-Prot (Human)
Match: CNTRB (Centrobin OS=Homo sapiens GN=CNTROB PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.661e-19
Identity = 43/91 (47.25%), Postives = 61/91 (67.03%), Query Frame = 0 
Query:  149 LKENIEKERLRRKHCEDQIKILQQKLLDSQEQLAVSVSTDRKKQIMIEQLDNTLANVVEGWKKKESLRDTAYKRVCSEKETLESTVQRQEE 239
            L++ ++ E  RRKHCE  I+ LQ ++L+ Q+QLAV+V+ DRKK  MIEQLD TLA VVEGW + E+ R    + +  E +  E T  +Q+E
Sbjct:  186 LRDALDSEHTRRKHCERHIQSLQTRVLELQQQLAVAVAADRKKDTMIEQLDKTLARVVEGWNRHEAERTEVLRGLQEEHQAAELTRSKQQE 276
The following BLAST results are available for this feature:
BLAST of TCONS_00040258-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CNTRB2.661e-1947.25Centrobin OS=Homo sapiens GN=CNTROB PE=1 SV=1[more]
back to top