XLOC_024321 (gene) - C. hemisphaerica

Overview
NameXLOC_024321
Unique NameXLOC_024321
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002308:21310..26576+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024321 ID=XLOC_024321|Name=XLOC_024321|organism=Clytia hemisphaerica|type=gene|length=5267bp|location=Sequence derived from alignment at sc0002308:21310..26576+ (Clytia hemisphaerica)
ATCAATGGAGTACAGCTATCAAATCATTGTAGACATCCAGTCAAACAATC GAGGTAGGGTCCATATGATCCCCACCCCGGGGGGTTACTATCCTTGCTGG CCAACGGGGGTGTTCCACAGAtggaaaaaagtgaccctgaatgggactaa aaCTCGCAAATCTTCTACTTATTcccaaaatctacaaaaaaggtacccta cgagggactgattttcttttctgatattttttataagtatCATGGATTGT GTTTCGAAAAATGATTGcgcgaatgcgtgaatttgggtaAAAAAATGCTT GAAGCATTCCTACGCTTctttttctcagattttttcacagaaaacCGAGA CAGACTGAGACACAGAATCTCGCTAACCGAAACAGAACGACGCACCTCAA GTATAAAACACGCCCGTGGGCGGGGTCGTACAGGGTAGTCTATACGAGAG GTCAGCCGCGTTGGAAAGGTTTATCAGCGGGTTGAATAAATTATTAAAGA AGGATTTCGTGCAGTCTTTTTGACGTCGTTGTTTTCATCAatcatgtttt taaaatctaaCCTTTTATTCTTGGATTGAGCGAGATAAATAGCACTGCCT TACGACGAAACCCTCGTCTAAAAAAGATTATGCAATATTATATTATGCAT TATATACAAATTTTACCTCATAAATAACTTCCAAGatgtttaaaaaagaa aagaaaatctatgTAAAAAAAATACTAGTCCGGAGCCAGTCCCGGTATGG ATCTTGATATTATCTCAAACGNAAAAATACTAGTCCGGAGCCAGTCCCGG TATGGATCTAAAAAAGATTTGACGTTCGAATCGAGGAAGCTCCTACAGTG actttcaagcaaaaataattctgacgtcaattattcACAATATCAAGTGA TGTCGTTGCCTTTACCAGACGACCACGGATTTTTCCTCGACACTGTTcag agtgataaaaaaatcgcgcgttgggatagagataggctaGTGACGCCGTT GcaaattttcgaatttaaaaAGGCGTGGCATTTTCTACGAGTTACTAAAA ATGTGTTTTGAAAGTCTATGCACAAGTAAAATCGGTGTTCTTTTAGGCGA GAAAATGATAGAAGTTGTTGTCCCATAAGCTGCGATATACCTATGATCGT TTTAAAATTAAAGTATTTATTTAAAACTCATATCATAATCCATAACTTAA CTTTGCgtaatattgttttttttttacagacaTGTATTCTTGGGTCGGGG ATGACATTGCAATAGAAAAACCCGATGGAAAAACGTACATAATTTGTCTT GgaataaaacaagaaaaaggtgctagaaaatcattttgaatATCATAGAT TCctctgtaattatcagacataTCACTCTTGTTCCACGATTTTATTGGTC CTATTTTTACACGCTTATCatgactctctaattcgaacctctctCATTCG AAATTTGATACAAGGAGGGCGTCTTACATTTTTCACAAGAGCACTCCTAC ACTTGCGTTTTTGATACCGTCGTCGAGCAGAATATTCTTGTATTTCCTTT ACCAGTCTCCTCAAATACTAACCGGGCCACTGAGATTCGGCATGTATATA AAAATTAACATATTATTCCCCTCATTTGGAAAGTGGCATAAAATGACGAG GGTAAATTGTATAAAAAAATCTCGATTGAGTTTTTGCACAACTTTCACTG TATTCTGGTTTCAGACAAACTGACAGCCAAAGAAAATGGAGATATTCAAG TCAATTTGGAAGACGGTTCAGAAGAAGAAGGCATCTATGTTATCGCTTTG CCGTCAAACGAATCCACAGGTATGTGAGATAAGACCATGTTCAAACGTca cggttccgttccgttccgttccgaaacggttTCGAAACAAGCGTGAACGT CAAGATTCGAAACGTcgaaaaagaagacgttacaaagcaaaaaagatcaa aacggtttcgcttcacttttttcatcggaacggaacttctccgttttctt gctccgaaacgttccaaTACCAATATGAACagactcgatccgtaacgaaa atcacaccggagcgaaacggaacagtaacgtgtgaacatagtctaatcat ttttcaatagaattactcTCAGGGAGGGACATCCAGGCAAAATGACCGAC GGGTATATGTACACCCTAAAGTGTGTGTTTTAAATACTGAAATACTGTTC TTCTTTAGCTTTTTTTATCTTTCCTAGAAGGTACTCGACCGATTTTTCTG TATTTTCTTCTTGCTAAAATCCTATGTAATAAACCACCAATGGAAGCTTC GAGTAATGACATTATAAATCCACGCCCAGTCTCCAACCAAAGAGTTCTTA TTTTTCAGGTTTCCAAGTGCATGATGGAGAAGGAAATTATGATATCATTG AAGAATCAACGCAAggtaaagtcaaaaataaacaatctatataccttttc gaccgtagccgccaattgccgcgcgggcatttctTTGTCCgttttatccc actaaactcgatccaaaccttttttgacacatttttctattgtcaatAGA TGCAAAAAatggactgggacggttttagtggaataaagcggacaaaaaaa tacccgCGCGTCAATTGGccactacggtcgaaaaggtataTCATAAATCA TGTTCTTAGGCTTTATTTTGggttcaatagaccttttcataaattacgtc atgaacatcacttgcctcttattcaaacaattaccatgggcgcgttcaca ctggaaagtttacctaattaaatctatcaaagttaaacaaagagatttat gatggatgaatacactggtttattacagttctttgtagNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgggtgtccctaatta aagtatcgagtcgaaacacaactatgagtagaaagttttatgtgcgtgtt cacaaaattgtattttaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttt gtaataagcctgtgtgatggagaacgttcttatattttagcgataacaca cacaaacttttctactcaatcgcatgttcaaactcgatactttaattaaa ACGGAAGGCaattttgttcgagttaaagccATTTTCGAGCCCTGGATACT AgtttataagacattgttaaAGTGAAGAAACCATCTAACTTGTTtgaatt aaggagacattcgagttatagagggtCGTGTTATAAACATTCCACTGTAT AAAAGTTTATGTGCAAGCGAAACCAATCCTTATATTATCATggtgtcctg aaaaaaagtagAAGGTCGAAACATATCGCTAGGTACTGTCGCTTTGTACT ACTGTTTATTAACCCGAAAAAGCATCGTATTATGCAgaggtagagcatcc ggctacagtGTGTGTAAGTCAGGGGTTTAATCCCCGACTGGGTACACTGG GTATCACAAAAATCTTCNGGTGTGTGTAAGTCAGGGGTTTAATCCCCGAC TGGGTACACTGGGTATCACGAAAATCTTCGCTCTTAGTGAAAAATGGGTC AGGGGGGGAGTAAAGAAAGGGCGAGGTCGGCATTGAAACATGCTTTGCAA AGCAATCTGTTTTGATTTCTTCATCTTTCCGGACTCTCttccattttttt ttgtcaaaataattgGATTTTTTTACGTTATGATATGATTTCAATTATTT GCAATTTTAGGTTTTCAATCAAATGAAGAAGAGGAAGAggaagaggaaga agaagaagaatacGAAAATGTTTGCATTGAAATTGGTCCTTCAGAGCAAG GTGAACCTAATTCAGACACAGTATACGAAAACTAATAAAACAATCTCGTA AGAATATCGACCAGTCTCGTACCGAGAGCCACTTACACCgctttttgatt taatttatgAATGTGATATCACCATTTGCTCTCACAATCGTAAAAAGCGA ACAAAGAGACTGGATACTAGCTTTTATTTCAGCTTGAAAATAGTTTGGTG TAAATGGGTCCACCTGATAAAGTTGAATTGGGTCTGAAATGAACGTGTAG ATCAGACTTAGACGCTCGCTTGAAGAAGATTGAGTTCTGGGTTTAATCCA TGGGATGTGAGGGTTTTCTGATTTTGATCTAGAAGTTTTCTCTTTGTAAT ACAGTAGATTCTCTTTAGTTCGAACCTTTAAAACTATAAAGTCTCCTTAA CTCGAGCAAGTTTTATGGTCACTTCAGTTAACAATGCCTTATTACCTATA AACCTTACTTTATAATTCAAAATTTCCTATGAACGTTGCAACGCTGTCCC ATAGCCCCGATGGAACTTTTTCCCACAGTGGGGATGCAAATTTCTCTTTA ATTCGAACTTCTATAACTAAAATGTCTATTTAACTGGAGCAGGTTTGATG GTTCCTTTAGTTAACAATGCCTTATAAACCTGTAAACCTTTCTTCATAAC TCGAAATTTCCTTAACTCGAACAAGTTTGTGTTCCCAACGATGCGTTTTT GAGTTATCGACGTTACAACGCTGTCTCATAGCCCCAATGAGACTTTTTCC CATAGTGGGGATGTAAAATTCTATCGAAAACCCAGTAAGGATAAAAAAAT GTTGTATAGCGAATCTGCAGCGGAAAAATATGCTGACAGTGCCAACACTG CCGGGCCTTTACACCACTTAGGCTTTCTTGTTCGAGTTAAGGAGAAATTA GAGTTATAGAGGTTCGAGTTAAAGAGACTCCACTGTATGAAACTTTCAGC TCACAAAATTTTATAGAATTTTAAGGCATTTCTTGTTTGAAAttagttta tttttaaaattcacaGCTTGAAGTTGGAGAGCAGAGTTGCAAACTCAATG GAACTAATATGGACAGTTTCTTTTATAATATGTAAATAACATTATATCAC AACTCTCCTactttttt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00040103TCONS_00040103Clytia hemisphaericatranscript
TCONS_00040104TCONS_00040104Clytia hemisphaericatranscript
TCONS_00040105TCONS_00040105Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00040103-proteinTCONS_00040103-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002308supercontigsc0002308:21310..26576 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.13 0.45 0.4 1.1 0.73 0.85 0.89 0.86 0.74 0.73 0.79 0.66 1.07 0.67 0.42 1.09 0.94 1.13 0.78 0.44 0.66 0.64 0.55 0.54 0.47 1.18 0.41 0.44 0.09 0.19