XLOC_023919 (gene) - C. hemisphaerica

Overview
NameXLOC_023919
Unique NameXLOC_023919
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002147:17587..22665-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023919 ID=XLOC_023919|Name=XLOC_023919|organism=Clytia hemisphaerica|type=gene|length=5079bp|location=Sequence derived from alignment at sc0002147:17587..22665- (Clytia hemisphaerica)
TCGAAGAAAGGTGGAAATCGAGCTTCTCCGCGTTTTTCGTACGAAAATCT ACCATCTTGCGCAGATTGGAACAAACTGCGCATGCGCAATATGCTTTAAA GAAACTGCTTGTCAGCTTGTCAATCCTCGCTCTTGCATACGCCTTGAACT AAGTTAAGTTTCACATTTAAGTTTACTGTTATAACATTAATGCTATTTTT AATTTTCTTTCTTACACGCTCCCAAACCTGGAAAACCCGTTTATCAATGC TGGGCAACCATGACCCAACGATCAAGATGTTCTACTGGAGCGATACCGGG ACACAACTATCGNAAGATGGCAGAAAATCAAGCGATAAAGGACGCTGTCC GACAAGTTTTGAATGAAGATTTCAAACAAGATCAATCTAAAGCTATTGAA AAACTAAAAACAAGATTAGATAAGAAGAGAAGCTATGACCAAATTCAGTT CAATAAGAAAGGACATGAGGAACAGTTCCAGCACACCACTCGAGTATTAG AGAATATGGACGACGCTCTGGATGCATTGGAAGAGAAAGATTTTGATGTT GCAAAAAAACTTCCTGACTGAAGGTAAGAAACTTTTAGAAGAAAGGTTGC AACACTTACAAATCGCTGACAGGGAGGGCTGGCTAGTGCTTAAACATTAT AAAAGGAATATTTTGGTTTCGTCTGAAGACATTCAGGAAAAGCATTTAAA GGACGCTCGTAAAACTGCTGAGCAGATAAAGGCCAAAATGGAACAAGAAA ACAAGCCTAAAGACAGTAAATACATAAGGATGGATGAAATAACTTGTTAC AACTGTAAACGTATCGGTCATATGTCAACTTTTTGTCCTTTTGTTCAAAA CAAAACCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNAACTGGGAAATAATTCAATTTCAT AAATGAATAAATGTATTCAAAGTTGGACAGTTTCTTTTTGTAGAACTACG TGGTGTTCGTTAATTTTTTGGAAAAAATTGCGTTATATTTGATAAAGATA CAGTTTATTGTCTCATGAATGCGTTTTCAAACACTTTTTCATACAGCGAA TTTGTTTTACAATTTTTACTTTGTCATTTAATTCAGAGTTCTGGGAGTTC AAACGATCAGATCCCCATCACTGGGGAAATATCACAATTCTCAAGCTTTT GGAAAAACGAATTAAAAACACTATCTCTATTGTCTAATATAACAGATCAT GGATATAAATTGCCATTTGTGAGCACTCCTCCTTCTTTTTATGCCAAAAA TAACGCTTCAAGCCTGAACAATGCAGCTTTTGTTGAAGAGTCGATCGAAA AACTAATTAAGGATGGTCGCATCAAGCAAGTAAAAGAAGCTCCTTTTTGC GTGAATCCTTTGACTGTAGCAAAAAAGAATGAAAAATTACGACTTGTTAT TGATTTGAGGCACATCAATTCTTTTATCGACCCACCNAGAATGAAAAATT ACGAATTGTTATTGATTTGAGGCACATCAATTCTTTTATCGACCCACCGA AATTTAAATATGAGGATTTGAAGACTGCTGCAGAAGTTTTTGAGAAAGAG GATTTTTAATAACTTTTGACTTGACAAGTGGTTATCATCACGTACTTATT AATGAGGACTTTCAGAGTTTTCTCGGTTTCGCGTGCAGCTTCGAAGGTGT AACAAAATATTTTGTTTTTTGTGTCCTGCCTTTTGGGTTAAACAGTGCCT GTTGGATTTTTACTTATCGATCGAGATATTCAACTTTTGTATCATAAATA ATACAACTATTTTTCCTACTTGGATCCCTAGGGACGAAAACTTTGTTTCA GATAGGATCTCTAAATCCATCGATACAGACAATTGGTCTATAGACATGGA AAGTTTTAACTATATACTAAGTCAATTCAAAGTTATTACAGTGGATAGGT TTGCAGATAACCTCAATACAAAAGTGAAGCGATTCAATTCAAGAGAATTT TGTCCCGGATCATCCGGAGTTAACGCTTTTTCTTATCACTGGGGAAACAA TGAAATTAAATGGCTTTGTCCACCAGTACATTTGATTGGAAGAACTATCT CTCATTTTAAAAAACTGCCAAGGAAAAGGCATTCTTTTTGTACCTTTATG GCCGTCTGCATACTATTGGCCATTGCTCACTTCAAATGGGAAAGAATTTA AACGTTTTGTACAACGCTTTTTAGTTTTAGATCCTTTTTTCATAAACTAT TCAAAGTTACGAAAGTTAATTGTATTTTTGATGGGTTTGCAAATTTTTAT TCTCTTGCACTGTATATNCTATTGGCCATTGCTCACTTCAAATGGGAAAG AATTTAAACGTTTTGTAAAACACTTTTTAGTTTTAGATCCTTTATTCCAA AGTTAATTGTATTTTTGATGGGTTTGCCAAATTTTATTCTCTTACACTGT ATATTGATTTCACATCTCGTATGCTATTGCATTCAAAATGCTGTTTTTAT ATCCTTTTTGATGCTTGAAACTTCAAGTGATCATGTCATTGTTGTATATG ATATCAAATGCATGAAACTGTTGTCTAGATGACTATGTATCAATGAACTG AAAAACGTTTTATTTTTATTTTTTCACGCAAAAATTAATTACCAATAATG ATTTGACGACGACACAAGCTGTGGTATCAATGCTTTGTTGCAATATCAAT TATGGTATCAATGCTTTGTTGCAATATCAATTATGGTATCAATGCTTTGT TGCAATATCAATTATGGTATCAATGCTTTGTCGCAATATCAATTATGGTA TCAATGCTTTGTTGCAATATCAATTATGGTATCAATGCTTTGTCGCAATA TCAATTATGGTATCAATGCCCTGTTGCAATATCAATTATGGTATCAATGC TTTGTTGCAATACCAATTATGGTATCAATGCTTTGTTGCAATATCAATTA TGGTATCAATGCTCTGTTACAATATCAATTATGGTATCAATGCTTTGTTG CAATACCAATTACGGTATCAATGCTTTGTTGCAATACCAACTATGGTATC AATGCTTTGTTGCAATACCAATTACGGTATCAATGCTTTGTTGCAATACC AACTATGCTATCGGTGTTTAGTTGCAATTTGAATTATGGTATCAATGCCC TGTTGCAATACCAATTACGGTATCAATGCTTTGTTGCAATACCAACTATG CTATCGGTGTTTAGTTGCAATTTGAATTATGGTATCAATGCCCTGTTGCA ATACCAATTACGGTATCAATGCTTTGTTGCAATACCAACTATGCTATCGG TGTTTAGTTGCAATTTGAATTATGGTATCAATGCCCTGTTGCAATATCAA TTATGGTATCAATGCTTTGTCGCAATACCAATTATGGTATCAATGCTTTG TTGCAATACCAATTACAGTATCAATGCTTTGTTACAATACCAACTATGCT ATCGATGTTTTGTTGCAATTTGAATTATGGTATCAATGCTTTGTTGCAAT ACCAACTGTAATATCAATGCTCTGTTACAATATCAATTATGGTATCAATG CTCTGTTGCAATATCAATTACGGTATCAATGCTTTGTTGCAATACCGACT ATGGTATCAATGCTTTGTTGCAATACATTATCTTCAGGTATAAGAGTTAT TTTTAAAAACTTTTTTCATCCTTATTTTCTTAAAGCATCCCCGAAGAACC CTCTAGAAAGGCTCGAAGGCATCAAAGACGAAAAACAATCATCTGGTTTT TCTCCCCCACAGGAAGTCCTTTAGTCAAACTGGCATTCGAGGGTGGCAAA CGACTAATTTTGTCCAAAGATTGAAATCCAAAAAGAATGCCTAAAGAGAT TCTCACAACAGATTTATAATCAAAGCCATTATTGATAAGTTTATTTCGAC AGAAAATCTTTTAGTTTCATTCTGATGACTATTCTTCGCTTTTCAGGATT TTTACGTATCAGCAAAATGCTGCAGATACAAATCCAACACATTACTTTTT GCCAATCAGGGGTGAAAATCTTTTTACCAAAGTCAAAAACAGACCAAATT AGAGAGGGGAATGCCGTCTTCATCAGTGCNGGTGAAAATCTTTTTACCAA AGTCAAAACAGACCAAATTAGAGAGGGGAATACCGCCTTCATCAGTGCCA AAGGTTCTTATTACCCTATTTACTAGTTACAGAAATATATCAATCTTGCT AAATTTTCCCGACCAAACGATTATCTGTTTTGCCGACTCTTTAAGTGTAA GATTGGTCATTCGGCCATGGAAACCTACCAATTTCATACACCACAGCCAG AGACTCATTGAAGGGCCACTTAACCGGTATTTTTGAAGACAAGGCTAAGT ATGGCTTGCATTCTCTTCGTTCTGGGGTTACAGCCGAAGCAGCTAACAAC GGTGTGTCAGATAGAATGATCTCAAAACATGGTCGCTGGTCGTCCAATAC TAGTCGTGATACGTACATTAAAGANCCAACGATCGAAGAAAGGTGGAAAT CGAGCTTCTCCGCGTTTTTCGTACGAAAATCTACCATCTTGCGCAGATTG GAACAAACTGCGCATGTGCAATATGCTTTAAAGAAGCTGCTTGTCAGCTT GTCCATCCTCGCTCTTGCATACGCCTTGAACTAAGTTAAGTTTCACATTT AAGTTTACTGTTATGACATTAATGCTATTTCTTTTTCTTACACGCTCCCG AACCTGGAAAACCCGTTTATCAATGCTGGGCAACCATGACCCAACGATCA AGATGTTCTACTGGAGCGATACCGGGACACAACTATCATTGAGACATACA TTCGAATTACAGTTGCAAAATACGTTACATTATAAAAATTCGACACTCTA ACGTGGACATTTGAAACGATGAAAGAACTTTATACCAGAAACCAAACTAT AAAATGTTTTGAATTTTTTACGTTATATTTCACATTATAAAGTGGGAGGA CCTTTAACCTCCGAAGGTCGGCGTGACGGATGCCTTGGTCGGAGATAATG TTTCCTCCAGAATAAACAGCCACTGGGGGTTTTACGCTACATGCTTCGTC ACAGTACAATTTAATTATTCCAAAGTTCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00039603TCONS_00039603Clytia hemisphaericatranscript
TCONS_00039602TCONS_00039602Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00039602-proteinTCONS_00039602-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002147supercontigsc0002147:17587..22665 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.24 10.6 9.26 5.93 0.63 0.95 2.5 2.11 2.87 1.61 3.2 3.25 2.34 3.31 2.43 1.7 2.47 3.31 6.44 3.34 2.21 2.6 2.97 4.6 0.66 0.62 1.48 2.14 2.58 1.8