XLOC_023873 (gene) - C. hemisphaerica

Overview
NameXLOC_023873
Unique NameXLOC_023873
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002135:17364..22093+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023873 ID=XLOC_023873|Name=XLOC_023873|organism=Clytia hemisphaerica|type=gene|length=4730bp|location=Sequence derived from alignment at sc0002135:17364..22093+ (Clytia hemisphaerica)
GCAGTAAAAAACAAGACGGCCAGAGTGAACATACCTTTAAAGCTTGATTC GTAAAGTCAGTTGATTAAAGTGATAGCCGAAAATTTTATTACAAAAAATG TAATATTCAAAGAATGGCTGCTTACAACCCCATCCAATTTGGTTATGACG TCACTTTCATTGGAGAAGACGAAAAAACATCAGCCCTTAATCCCGGTCAA AAGGAGTTTGCAGGAGGGATAAATAAAGATGATATCACATGTGCAATATG TCATTTGATTTTGAGGGAGCCTGTACAAGCTGTGAAATGCGGACATCGTT TTTGTACAAAATGCATCGGACAATTTCATCAAACCAAGTGAGTCATTATT TTTTTACCAGGGAAAACCACTTTTTCGGGACCGATATTTTAAATTCGTCA CTTTACTTCAACCAAATTTACAATTCAGTCACTTCAGCCCGACTTCATTG TTCTGTACTAGNAGAAAATCTTGTTACAAGAAATGTAATAATTAAAGAAT GGCTACTTACAACCCCATCCACGTTGGTTATGACGTCACTTTTGTTGGAG AAGACGAAAAAACATCAGCCCTTAATGCCGGTCAAAAGGAGTTTGCAGGA GGGATAAATAAAGATGATATCACATGTGCAATATgtcatttgattttgag agagcCTGTACAAGCAGTGAAATGCGGACATCGTTTTTGTACAAAATGTA TTGGAGAATTTCATCAAACCAAGTGAGTCATTATTTTCTACCAGGGAAAA CCACTTTTTCAAGACCGatatttcaaattcgtcactttacTTCAACCAAA TTTACAATTCAGTCACTTCAACCCTACTTGTCCTACTTGTCCTATACTAG CCCGAAAATAAGTCtcgtaattcgacgtttaaacaAGGAActtaaattta taatttattaaGTTCCTTGGCTTAAAGCAATCATTTTAGTTAATTCATgg tatgcaccactgcaatgacttcacgaaattatacacccctgtgtcaaaga cccggtggacccccccaccccggtggaaaataggccaaaaaatcgtcccc ggttgAAAAAATgtcctacaatttcaaccccactgcgaaattgctctatg attttatcccattgaaaactgaatgtaaaaattgcactgagacaggggtg tagtatgcaacttttctgtttttacacccctgtctcgcagccccggtgga actttatcaaaaagtgGGATCAAATTTTATATCCAAATCCCaaataaaat tatattgttcccgagcttaaaatatccagtggggatggttttggacagca attttttgcattgaatttcgaattgggatgaaatcaaagtcaattacACA GTGCGGCTGAAATTGTAAGTTATTttgtccaccggggacgaaattttagc caaagTTTTCTGTGGGGATGGTGTCCCAgctggtctgtgacacaggggtg tgttttttttccacccaatacgtcactttttctattgtggaaaatttgaa aagttctcagaagactctcaagtggtgcatatcataattAAAAACATATG GATTGAATTTTCGACTAAAATAACATTTGTATAAAATTTCGGGTAAAAGT TTCGGTCGGGGATAAATAAATCGTTTAAATATTTCGACGAGAATAAATTT CATCACCCtatcaaaattttcgtcacttttcccccaATAAGGTTGATAAA ATAATAGAACGCAGCTGAATCTCATTTAAGTCACGTAGAAAGAAACCTGG AACCAAAATTTGCATATTAGTGATTAAGAAACTAGTGTctcaattttttg ttcattttttttagtCCAGAAAAATGTCCAATGGATTGGCAGACCATTCA GGTAGggttaaaatataaaatatttctataaaAGCTACTTAGTGTATCAG TGTTGCAACTAGGTTTTGTGAATATGGACGGAAACCTTAGGATTGGATGg tcatttgaaccaaaaaccCTTTTACTGGCAAGACAGAAATGATATATTTG TATCTCAACTAGACGGATATCCGTCTACAGACGGAAAAGTTGCCACACTG GTGTATAtatcaatttaatttttcaaaaggcaAGAAACGAATATTCAACC TTTCTTTGGCAAGCAAAAGTGATGCCTTGAACCtgacattttctttattt tcacgtTTAACGTTTTGTGAATTCTGGCGGTAAATGTTACTTCCAATCTA GCGTTTGTATGAAAATACGCGGACACCGATACTTATCATACATAAAAGAT TCGACTACATACTTCGACTATACCTTATCGTATGTCTTTTTCAGGTTTTT CCAGATATTGGTAAGAAGAGAGAGATTTTGAATTTACAAATTCGTTGTCA AAATCACGAAGAAGGGTGCGTTTGGCAAAATGAGATCAGAGAACTAGAGG TGAGGAATCCTGGATTTTTTgcctttcaaactttcaaaaaagtcgcCACA AAAATGCCACAACATTATCTAAACGCcataaattttgtgaaattgaaaat tctaaaaaatcgaatttttgttGCCGTGAGTGTTACACTGGAAACTATTG TATTGTATAAAAGAGCTGTGAATGTTTCCAAGTACTTATTAAGTTTAGCA GTTGAATTCCAagtatacgttttttataagaacatccaaaacttttgaag ccttcggatgttcttaactttttgagttttaaacctaaaaaccTAACCTT CTTATTCTCAgcattttgaaagtatttttatccattttcctaagaaatcg ggtgttttagattttacgaagccttaaaatgttcttgtttttaatatttt ggccttatgttcttatacagtttgttcttataaaagatgtgtACATTCCT TCATCGACTGCCCTTTCcctttcattttctaaaaccATAAAAGTAATATT CAGCGTTTAACCGGCCGATAGAGAAGTTGATTTTTCgtgataaaatcttt tttcatatAGAACCATTTGAAGAATTGTGGATACCAGAAAGTACCTTGCG AATTGAAATGTGGTGAAAATGTTTTGCAGAAAAATGTAAGTCTTTGATCT AATTTTCTGTAGTATTATCCAACACAGTATTTATTGTGATTTCTTAGGCT TCAAAAAACAGATTCTTTGACTTATTCCATGTTTTATATCTCACATCTCA TATTAACAGAAATAAttcatttttcactttgaacggtgaaaaagaatgcg gctattatatattttgatttttcccgacatgtttcggactcggtaattat atttctataatttttttattaataattGAATGTTTACTTTAGATGCCAAA ACATTTGGTCGTAGAATGTCGAATGATTTTACGTTGCGCGTTCAAAGACT ATGGATGTACCTTTAAGGACTTACCCAAAATTGCCTATTTTCATTATCGG GCTTCAAGAGTGTTTCTTTCTTCACAGtttctttaaaataataaataaag cGAAATTGATGCCCGTGGAATTCCcagttttcaataaaaaatcttcCTGT TGTATTTTAATACATGGCATTTCATCTCTTTCCTCCGAACAAAAAAACTC CTCCAAAACTTCTTTTAGGGTACGAAAGTTTCATTGGACAAGCACATCGC ACAgtcaaaatatcaacatttgTCTCTGGAAATGAAACATGAAATTGGTA AAGTGAAGAACGATTTCGATGAAAAATTTCAGAATGAAAAGCTCCAAATT GAAGACAAGTTTGACAGGAAATTGAAGGAAAAATATGAGGAAATTCAGAA CGTAAAAGCGCAGTGCAAtcagaaattgcaaaaaatcgAAAGGGATTTCG ATgcaaaattgatagaaaaacaTCAGGAAATCAAGGATTTGAAAGAGGAA TttgggaaaataaaaaatgacctcgatgaaataaaaatgaatgaCAAGAC TGAGGAGCATTTCAAAAACCTAAATGGGATATTAGTAAACAAAAACGAAC TGACATTTGGAATTTTGAGAGTACCGCGATGTCCGTACACTTTTTTGATT GAGAATTTCAAAACCAAGTTTGATAAAGCGAAGAAAACCAACGATATAAT TCATTCACCACATTTCTTCACGGTGAATGGATATAAAGGTGATTTGGAAG TTCACCTAAATGGTCAAGGTGCAGGTAAAAACACTCATATATCagttttc tttcaaatcttAAATGGACCGTATGACGATCTGTTGAAATGGCCGATACC GTGGAAATCCTACTCGTTCATTCTTCTCATCAACGATAAAGAAGTTGACA AGTACTCATCAAAGAGCACGGATGAGGGAGGGaaatggaaagatattttc aaacGCCCAACTGGTGACGTAGGTGAAGATTTGGGATATCCAAAAGCTTT CTCACATGAATTAGTAAAAGATGTTACTGATACCGACAAAGTTGCGTTCA AATACAATATGACCTTTTATTAAGAACGATtgatcagaaaaaaaaacaat ccaaTCACCAAACTGGGGTAATGCAAATTAATGTAGTTGATATAACATTC GAACGTGAATGAGCTACTGTGTCATTAAAgactatcaaataaaaaatgga cTTAACTTTAAACGATTGACGAGAACAGTGTTTTAAACGGAGAACTTTTG AGGGTTGGAAAACACAATAACGAAGTAGTtcaaattattaattttttccG AAGTATTTTGTAATCATATAGTAAAGTTTTTCTTCAGTTTGTATTTtcta ataataagaaaaaaatattttattcttttc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00039523TCONS_00039523Clytia hemisphaericatranscript
TCONS_00039524TCONS_00039524Clytia hemisphaericatranscript
TCONS_00039525TCONS_00039525Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00039524-proteinTCONS_00039524-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002135supercontigsc0002135:17364..22093 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.29 0.28 0.15 0.42 0.1 0.14 4.93 6.37 6.56 5.72 6.1 3.73 71.44 43.07 7.33 10.64 2.9 3.6 83.56 120.47 3.5 3.58 2.85 2.59 40.84 26.98 0.44 0.41 9.31 6.94