XLOC_023845 (gene) - C. hemisphaerica

Overview
NameXLOC_023845
Unique NameXLOC_023845
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002128:9634..16301+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023845 ID=XLOC_023845|Name=XLOC_023845|organism=Clytia hemisphaerica|type=gene|length=6668bp|location=Sequence derived from alignment at sc0002128:9634..16301+ (Clytia hemisphaerica)
AAAATACGACTTGTGCTGAGTCAGCTGACGATCAAGAAAAACCTGAAAGA TCTGAACAAGAAAAACCACGTAAGAATGAAATTACTATCATACTTTAAAG AATATCTTCACCTTTGAAGAAAAAGTCTCAAATGACTTATGAAATGTTAG TTTTGATGTCACTTGATGTGGTTATTCTGGGTTATTTTCAACCTAGGCAA TTGAATTGGCATTGGTTATTTAACTGCAAAATTATCAATATTGATGTGCT GATAgttactcaatttttgaaaaggaagtTTAATGTAAATGGTATGACTA TCTGAGGAAATTTATTAAAGTGTTAAATTAACACTTAATCCTAATTCAgt tttttacacaaattctTCGTCATTTTTTAGTTCAAGGAGATCCATCTCAT TctcgaaagaaaaataaagttgGTTCTGTAGCAGACCATGATGATAATGA AGATACATTTTCAACTAGTTCCAGTGAtagtaaaatatattttcactCTA CTaaaccaatttttattttcatgttttttgagTTTCACCCTAAGATTCTG TACTTTAGCCAATAGTTTTCTTTATTGTAAGGCTGTTACTCTCAATTATT TTGTAGGTCCACCATGTGTCAagaaaaatctttcgaaaaGATCAAATAAA TGGAAGGCTAATGATAGTAAGTCTATGTCTAgcataccttaaaggaagaa attttgacgaatttgccaaaatttctttccaccGAAATTAAATATTCTGG CCATTCGATAAAATTACCTTTGAGTTAGTCTTCGTTTCTCCTAAAAATGC tgctttttaccatttttttagcTGACTTATTCAACAAATAACAGGTCATT TGCAATAATTAACTCACTAAATTTAGACATTTTCCTAAATTCAGAGATTT CTTCTTTTCAGGTACTACCATTTTTAACTTTATTGTGTAATCTAATTTTC AAACTCTTCATTCTTACTCTCACGCACACAGAACATGATGATCGCTCCAC ACCAATTGATTTTAGAGGGCCAATTTGGGGATCTTCATTATCAATGATCT CTACCCCACCACCAGGACCATCTCCACCGCCATCCCCACCACCAGCACTC AAGCAATCATCGAAAGCAAATTCTGCACCGCCAAAATCCCGACATCCCGG CTCACCGCGGAGATCACCAAGAAAACATATGTCTTCACACAGGAcatcat tatcatcatcatcgtcatccAAAGTCATTTCTTCATCACAAAGAAGTAAA GAAAGCGAAACACCAGAGTTTACAAAACATGCTAGAAAAATGCTTGGATA CGAATCaggtacacttttttataagtataCAAGAAAATCGGGCTGAAGCT CAATATGCTTCGCGAAATTTAGTTTTTAGCCTCATATCATGCTTAACTGT ATGCTTAAGATTTAAACCATATAGTGCAAGTATGTATCTAAAAAGCTTCT CGTGTGCACAGTTTTGTTACAAGCAAATTAACTTCCCTCAAGAGGATCAA GAAAATCTTGGGTTACAAAATTCTAACACCCCTGTTGCCatggaaaatga cgtcattggttaccaAAGAATTAAAGTCgtgaaattcaaagaatttttgt tCTATTCGAAAGAGCATGCAAAACtggtaaagaaaaaggtcacaatcTGA AAATGTATATATCTCGAGGTATTTATTAGGAAATAAGGCAaagtgacgtc ataaatgatgacatcatcgaaaaattaaaattttttcaaattcaaaaatg tttgGCTCATTCGAGAGAAACCTTCCAGggaacaaaaaaaatatcactat gaaaaaacttgaaaatcattttaaaagaggCTATTggtattttaagtttt gcctgtaATCTGCTGGGCTGGGCGTGCCTCAAGCTCCAGCCTTCCACaag caaaaatcaaaaatatcaattttggctaaGATACTTTCTTTAAATGgtat tgacctttttcttttttcatgccGTTTGAAAGTCTTGAGATATAAACTAA TCTAtttatttttagggaaaaatacAGCATCCAATGAGTCTGCAAGAGCA ATCAAGGAAAAATATCCTTTGAGTACAACAGGTATAAGAAATCTTTCTCC TGTATTTAAGATTGCTACCCTTTCAGAGGAAGAGAATTTGTGTGTGTGAG AGAGAGGGAGAGAGATTTCAAGTTTGAATTGTCTCGAGCATTATTCTTCT AATCTTTTGTTTCAGAATAACAAAGAAGGACGATAAACTTGATGCTGGAT ATGCAAAAAGACATGAATTGTCAAAATAAGCCAAATAAACTATACGATCA CACTGAAAGAGGAAATCGAAAGTTTGGAAGAATTATTGAAATACGAAGAT ACCTTGGCTAGCCAAAACGAGTTTGAAGAACTGGTAAGTCGCTTTCCTTT TGGGgtttttattaaataattttcatcTTAAGAGGGGCGTTtgttcgagg gggcgtttaaaaagcttacacattttttaataataagcaaccgagttgct aaggGCTCGGGCCtcaaaatggtccaaaaaataagcaaCTTGCTTAGCAA CCCTGAGACCTCAAATCCAAATTAGCAACCTTTTTTctcagcaataaaaa ataactttgacacAACTTTAAAAGaaagccttgaaaatcttcgaaAAGTG CCTCTACTAACCatgcaaaattgaaaaatgcaaaaatgttccTTTCAACC ATTTTAAGCTTTGACATTCTTAAACAACCTTACAAGCAACTTTGGacctg gatttcgaaaaaatcctTAGCAACTCCAGGCCTGACCTGAAaaatggagt tgcttataaaaatatgtgtcctgccaagcgatttccatacCACCCGATTT AAACCGGTTATCGAAAAACCGATCTTTGCACCGGTTCACACCGGTTCAAA CCGGTGCCGATCGTTCGTGCAACCGGTTCAAACCGATCTAAACCGGTTTC CAAAAAATCAGAACCGGTTGCTACCGGCTTGGAAGAGAAGAACACCGGTT TAGCAATAGATTTCGGCTGCCGGCAGTTCCAAAATAATATACTGCGAATG CGTTTATTTAATAAAAAGTAAAGTTTCTTTCCACGCTTTTCTCTCTGGCA TCATAAAAGAAGAAACTCCCTTATTTGCTTGCCTTTTTGCTGAAGAGAAA ATCTCTTCGTTAATTGTTGCTGAGTAATTTTTNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNACCACTTTCATGAAAGCCTTCAAAGGGCTAAGTCGATGT TAGAGAAGAACCAGTATCCACCAGAATTTTATGACCCAATCATTTCTTCA ACCATcgagaaaataatttcaaaagaaaacgagCCATTGTTAACGTCAAA CCAGGAGCCAGAACAAAAGCAAGCTAAAGTAAAGTTCTTCGTGGAATATC GTGGTAAAGTGACTGATAACTTTATTANgtgtatatatttttgatgatta cattgtttttatatGTACATGCACAATTTTATGACTTAATTGTTTCCTTT TCTCTTTTAATACTTGTTTTATACTCCCATGTGATTTTATGNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTC CGTAAACCGGGTTGACACGGTTCCAAAACCGGTAGAGATCGCTTTTCAAA CCGTTTTGCACCGGTTTGTACCGGTTTGTATGTAAAAATCAACAAGCTCA AGATactcaattttagaaactttgacaCCGATTTCTCAACCGTTTTAAAC CGGTTTAAGTCATGAAAAACCGATTTCAACCGGTGTGTTGCGAGTCAAAA CCGGTGTGTGTTTTTGCTGTATGGAAATCGCTTGGTAGGACACATGTgta gtaaatatttttacaatcctgaaaaaaatcaattactTAAGAAAATTGAT TGGATGATTAATGCCATGTGTTAATTTGTTTTTTAGTAGAAAGAGACTTT TTCCTGTTATAcaaatgtaaatttatttttcttgcaGATCGATTTATGGC AATCAGTGAGTGGGAAAGATCCACGAAAATATATTGGAAGGATATTGAGA GTGTAAGTGTTTCATTTATTATAAATTAACTTGAGTGCCCAAAAGCACAA TATACTTATTTTTTAGGGGGAGATTAAGTTCCGCATCCCCAAAACCATTA AAAAGGTTCTGCTCGGAGATTAATCAGTAAATGCTATTGAAGAATTGTGA CTTGTTTTTTAGGATCACAACAAATGCCGTCTAATCGCAACTGAATCATG ATGGCTCAGGTGGCAAAACGGGCATGAAAAATCTTCATCTAGCCCTCAAG CGTAAGTTTTTCGAAATATCACATTCCCGACTTTTTTAATGCCAGATATC TCGTAGTCATTTTTAGAGGTGAAATTTGATGGTTAAGGCTAATTcaattt aagaattttttgtaaaattattaATTGTTTTTACAGGAAAACAACAGAGT TTTCCAGTTGTTTGTAGAATGACGATCTCACGAATCAATTAGACGCAATT GTTAAATGTATAAAATGTAGACTTTTATCAATTTAATCTAATAATCTTTC TGGTGTAAACTAATATGTAGatgttgtttttattctttatttggGCAGGT TGCTGCAAGTCCAAAACAGGGAGTGAAGGTGATGCGGAATCGAAAAACGT TCTCAAAGATGACCCCGACAGAGAGGGTGGGAGCCGTTGGGAAAAGAGGC AGAAGAAATGATTACCCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00039495TCONS_00039495Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00039495-proteinTCONS_00039495-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002128supercontigsc0002128:9634..16301 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.2 1.62 0.8 0.69 100.9 85.13 42.62 41.5 22.82 22.46 26.47 21.53 16.47 14.32 14.01 13.11 15.84 16.97 31.75 40.44 17.79 17.57 10.29 11.56 9.95 11.9 16.29 11 9.96 7.42