XLOC_023574 (gene) - C. hemisphaerica

Overview
NameXLOC_023574
Unique NameXLOC_023574
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002023:19866..25219+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023574 ID=XLOC_023574|Name=XLOC_023574|organism=Clytia hemisphaerica|type=gene|length=5354bp|location=Sequence derived from alignment at sc0002023:19866..25219+ (Clytia hemisphaerica)
AATGGAGATAGGCCAGGTGGCTCTCAGTCAACAACAAAAGTTGAATTTCA GGTTAATGAGGTAATTTTGTTAATGGGTGTACTGTTTATAATTAGCTTAC CATTCAAATTGAATAATGAAGCTATTTTCTCTTTGTCAGAACCGATCATC TTTTTAGATATTCTTTCTACagattttttgttaattctgtTTTTCCAGAC TATAACTGgttaactttttgtgttgggtATTACaacttatttttgaaatt ccgtTCAAATGATCTGATTCGGATGTAATTTTAACTTGTGAAATAAACGT GCTCTCCTTGGCAACATACCCCCCTCTTACAGACCTGCTAGCAGGATCTT TCAGGCAGTTGGGGTTTAAATAAAGGACCAGAATTCAATTGGGAAGATTG ATATATCCCATGCTTTCGAGCAAGAAAACTCAATATGGatagaaaaaata gcacaatatattttagagtataattttccattggggactatgttttcatc aattttttttcaatatgaaGGGGTACTTGGTCTGTCAGAAGTGACTAATT GTCTTTGATTTCAATGCCTTGAAGAGGCTAGTTCTGAAACTCCTGGTTGG GAAATTAaaagccacttattttccattCAGAACACATGCCCGtgtgtttt caaaacaaaatttaaaagtgcacggcaaacttaaggcttcactttttctt gcttaaaaaaggTAGAAGATTCTTCTCTAGCACCTTCGTACGATGGCTCA GAAGGCTCAAAACACGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNATACCGAGTTGTAACAAATGAGTTGATGTTAATAGCG AAAGCATTTGTGGTTTGACGAGTTGCAAATCTGGTTTGTGATTTATATAT AACAACATTTTTTTGACGCGTTAATCGGTCACTTTTTTGCTTCCCCGATT TAAGCCCAACAATACCCCGATTTTTGCCACTGGGGGAAAACTTTTCCGAC CAACACTTAACTCGgaaattttgattcattttgcctaactcgacattcat tttaaatacccaaaaaaaattcattgcgCGGGCCGCTCACTTGGGAATTT CCCACCGTGACAAGAAGTCAGAATTGCGGAGTGTCACTGGGCAAAAGGaa cgacgggtatgtgcgggtactaagggtaccttttccaatatgtttaaaat gcactgtaagggtcggaaaaactagagatgcactgtaagggtagaaattt cagaaaagtcttgaaaaatcgagatattttgaccaaacaTGCTATAATTT GACCATtatttgcacgaaagggatcgaaaatttgggggaaaatgcactct tagggtatgattttcactgattttaaataccgtcagtccgcaaacccagt gccccccggGCTTGAGCCTTTTGGGCCattgaccctagacagttctagtt cacaaattttataagaactagaaGAAGGTCGTTAGGGATCATCGTACCTT CGGGGCTTCAACCTGAGTTCCACCACTTTACCGACTacagaagaaaaaca agcagtgattttttaaattcttttttatttagtttttggacctaccccgg ttgggtggaggtcctataaagtAACCTGTgcctgttcgtccgttcgttac caacttttctcaggattgaatcataggaatcttttgatttttggtacaaa ggtgcaaaatagtggtggccaaaatgtgacagagcccgattttcgaaaaa agatatttttgggccaaaaaacgggatttttttgcatgaaagtagataGA AGAtcgctcaagcagatttttgcaaaaaaaatttggttggctcaaaaaac gcatctttatctataagaatcactatttataagcatagaacaatgttctt agccaaattattatttttattattactttttctaaagaaaatgtcacggt agagcgcgatggtttgagttttctggaaacctgtgcatttttctgatagt ggattgtttttataaagaaaagcgtttaatagcttttttatttatttttc aaaagtctttttcaatagtgctgatagtttctcccaatagatatgctttc attgttctttatttttctgtATTTTAACCAGTTATGTCtgatgtgtttca ttgtttaaatgttcattgattagttggataaccaggtaggtccataaaag tatcacttgttttttttcCGATTAAACCTTACCTTTATGTTTTaacgaga aatttcaaattacttcccattttttagcaaaaagaaGATCGAGAAGAAAG CGAATCATTTGACCCAACGAAGCTACGCGACCCCGAAAACGTTTTTAAGT CGCAGCCACGGAcgaataaaaatgaagaagtcgTGAAAGAACTGTCCACC ACGTATACATATATGAAAGGAAAATGTGGGCATTCTTTTGCGAGCTTCCT AAAACCACGGATCTTTCATTTCACCAAAGCTTTCACACCTTTATTTGCTT GGTTCCTTCCGATACTAGCTTCAATCCTCCAGTTCTGTTTGAATGAGAGA AAGGAGGACGAAGTCGTGGTATTATGCGAAGATATCTGTCAAGTACAAAT GGTTCAGTATGCCCTGGAAAGGATACACAAGCATCCAATTGCATACGCAC CTTACCTTACCGGAGAATATCCTCAAGACATCCACAAAATGAaggaaaaa ttcgtcaaaaatttgGACGAAATGGAGACAGTTCTGATATCCGATTATCG GTCTGTTCGTGGATTGGAAATGGCTCATACAATCATCTTTGTGGATCCAG AAAACGAGGCCAACGCACATTTTCTCATCGAAGCAATCACACGAACCATA ACAAATCTTGATGTCATTTCAACGAAACCTTTTCCACAAAATCCTTCCAC GAGTATCgagagagctttccaaaaatatgtcGACGGGACTTTAGTAGTCA AGACACACGTTGAATCAAGCAAAGACGCTGAAGATCTTTTGAAAATACAA TTCCATTACAACGAAAAGGACggctcaaaacaaacaaaaattgtCTCACA GAAATTGACCGATTTCAGGTTCGACGTTTCAAAATCTCTAGATGAAATCA ACAAATATGAAGAGCTATGGCAAAACTATTTCAGGTATTGAGCtttacca tttttttttaatcttacgtcagagaattttttgattttatctgGTTTACC TCAAGAAATCGTCAGTGGAGAAAACCCTGAACATTAGTACCGTTCAAGGG ACAACCGAACCTTATTGTCTGCACATACTAGAATATGCATTCATTTCTGT ATCTACCCTACCTACCCGGCAGTTATAAGGATTACCATACCggtatattt tcgaaaatttggtcttttcgaaaatttcgcctttaacgaaaaatttattt tttctctgaaaatcaGACTGCAAAcaaatacttttattttttgtcCAGGA TGGCAATGACTCTTTCAAGTCCCATTTCACCTTTAGGAACGTAAGTCAAT GCCGTTgaaactctctaattcgacattctataATTCGGTGATAGTGTCTC CGTTGAAAGTAATATCCTTTGGAGATTTTTGCTTTCCTATTTGATTTCCG TGtgtaaaaggattttttttttgcaaatgtcTCTCTTAATCGAACTTCTA AAGCTTTCTTTAATTCCAACTAAAACATTCGTCCGCGCAGCTGGAAAATG AAGTAAGATACTTTCTATAACCCGAATTCTCTTTATAGTTCTCCGTCCCT TGAAGATTGAATTagagcatgaacatataaacgactggacgtctatcttt tattgtttcTTTGAAGCGAGTTTCGTTGCCACCTgtatttcaacatttaa cagCGCTGAAATGAAGAAtctcaactgcgtgtatacttttgaatcacttt tgtcacttcaaaaatcgaaaaaaatagtATACCCAAGTATAAAAATTGTA CAAGAGGAGTATCATAATTCGACCCtcatactctctaaaattattctaTA CTTTtcagtcgaaatttcaaaatattagccGGAGCTACAACAAGTTAACA AAGTTAACAAAGTATTTTTCCTCATAATGTAAATTAAAGAGTCAAAAAGA GTTTAACCATCTTCTAaaaagcggggggggggggggggaacttgattttc gatattttagtGCGTACGCACTATTTGTACGGCCCCTTTATGtctttaac gaggcggcaatgAAACCAGCCAGTGGTTTAAATATTTATATGTTTATATT TTCTTGATTAGAGAAGGTCAACTGTATCATTCGATACCCTCTCGtcttcg atgaaaatccaattacATTTAGATGTTGAATTATAGAGTCTCAACTGTAA TTACAATTTTGAGTTTTCCAAATTTACAATTCTTTTTTAGAAGAACTGAA TAGTATAGCTTCTTTTAAAAGGCAGATAcattaccgtgaaaagcacaggt cgaaatcatatatgaATGAATgcgaaaaaaatattcaaaaaataattttt tcacatattaaaaaatacagtttaaaactttttcctggttgttttttgat gatttttgaagtcaTTCAATCATCATTGATGAACTTTGGactatatcttt tgattgaataatttgatttttttattgattgatgTTCTAAGATCGAAGAA TCACTCgtgtaaaaatgataattatagcacaattatacaccttttcgacc gtagccgccaattgccgcgctggcattttttaccaccctaaactcgaccc aatcctttttttacacttttttctattgtcttcaagcgggaaaaaagact gggacggttttagggtggtaaaaaatgcccgcgcggcaataaTTAGCggt tacggtcgaaaaggtgtattgaagaagtttatttttttcttcttcaattt taatcttcattttcagatttttttgaattttttctttttgataatattcc attcttgtttatcttttcaacaagcagtAAACTGCTATcttattcgaatt tcgaattctatcaaaacttACAGCGTTCTTTGGctccgctgcagattata ttaaGACAGACTTCTAATAGTATCTTCTGCAAATAGCAACAAATGGGATG GCAAAACCATGGAAAGTGTGACCTTGAATGATGGAACCACGCTCAGTTTT ACTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00039144TCONS_00039144Clytia hemisphaericatranscript
TCONS_00039145TCONS_00039145Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00039144-proteinTCONS_00039144-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002023supercontigsc0002023:19866..25219 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.36 0.36 0.27 0.12 3.05 1.57 3.06 4.42 1.62 2.5 3.61 1.41 3.7 3.83 3.86 7.24 4.28 8.16 5.51 7.38 8.21 7.54 3.24 5.13 4.93 5.2 13.29 14.01 10.51 8.72