XLOC_023433 (gene) - C. hemisphaerica

Overview
NameXLOC_023433
Unique NameXLOC_023433
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001980:17733..20741-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023433 ID=XLOC_023433|Name=XLOC_023433|organism=Clytia hemisphaerica|type=gene|length=3009bp|location=Sequence derived from alignment at sc0001980:17733..20741- (Clytia hemisphaerica)
GAGGCATTCAGGTGTCCAGGGTCGTGTTTGATGCTACAATGCTATGGGTG
GGTGTGCGGTTGGATCAGATCAAAACTTTAATCAATATTTTTTCACACTT
CAAATCTTTTTCTCACACCTGAAATTGTCATTCTGTGATGGGAATGTTTC
TGTTTCCCCCATGTAATCCATGACTGTCGATAACTAATCAATATTAATCG
ATGGATTAGATATCGATTAGAATCTATAATTGATAGCTTATCGCTTTTCA
AAATTATTTGAGGCTTGATTAGTATCAATTGCTATAGATCAAATCGATAG
TATCGATTTATGATTGATAATCAATAATAATTGATATTGATACGAGAAGG
TACTCTTTTGTGCCTAATTGTGGGTCGAATAAGCAGGGGGTGGGTACTCT
AGGAGAACATCCATAAAATGGGGGGTCATAATTAAGCGATTCGGGGTGAT
TATCTTTAATTATATATTATATTTAATTATATACCTTTTTCTAGAAAAAC
TTAAGTACTAATAACAAAAAAATGAAATATAAAAGCTAATAAAACTGGTA
ATGTCAGAGGTAAAATTTCTGTCAATGATCAATCTTTGTATGTCTAGTCA
TGAACTTGATGTTACCTTATTAATGGAACTAATTTTTGCGGGAACTAATT
TTTGCAGTGCAAAATAAANTCAAAAAAGGGCCTAAATTTAGGTCATGAGC
CTCATGGCTGAAATTTTACAGGTGATAAGTACAACCCTTAGGGACAATGA
AAATCGAAAATCTAACCAAAAAATCAGGTTCCTTGACCGGGTCAGATGCC
CCTGAAGTTGAAAAATTTGAGAATTTTCGGGGGGTCGAAAATGACCCCTT
TCTTAGACAAAACTTTCTATAGCGTTTGATCTATTCAATATTTAGCGATG
AAATTTGGACAGGTGTCCAGGGTCGTGTTTGATGCTACAATGCTATGGGT
GGGTGTGCGGTTGGATCAGATCAAAACTTTAATCAATATTTTTTCACACT
TCAAATCTTTTTCTCACACCTGAAATTGTCATTCTGTGATGGGAATGTTT
CTGTTTCCCCCATGTAATCCATGACTGTCGATAACTAATCAATATTAATC
GATGGATTAGATATCGATTAGAATCTATAATTGATAGCTTATCGCTTTTC
AAAATTATTTGAGGCTTGATTAGTATCAATTGCTATAGATCAAATCGATA
GTATCGATTTATGATTGATAATCAATAATAATTGATATTGATACGAGAAG
GTACTCTTTTGTGCCTAATTGTGGGTCGAATAAGCAGGGGGTGGGTACTC
TAGGAGAACATCCATAAAATGGGGGGTCATAATTAAGCGAATCGGGGTGA
TTATCTTTAATTATATATTATATTTAATTATATACCTTTTTCTAGAAAAA
CTTAAGTACTAATAACAAAAAAATGAAATATAAAAGCTAATAAAACTGGT
AATGTCAGAGGTAAAATTTCTGTCAATGATCAATCTTTGTATGTCTAGTC
ATGAACTTGATGTTACCTTATTAATGGAACTAATTTTTGCGGGAACTAAT
TTTTGCAGTGCAAAATAAAATTGAAAAAGTCGTATTTTGCAGGAATTAAT
TTTTGTGGTTTTGCCCTTTTTTGGACAAATTTCTTTCATTTTCCTAGTAA
ACAAACAATAGGAAATTCCAACATATTTCAGATTAGTAAAGATTTTCAAA
ATTCAACTTTTGCTAGTATAGAAGATTTTCTTTTACTTACTATTGAAATA
TCACTAAATTGATCCCTGAACTCCTTCAACAAACTAAAGAAATCATGTAA
GCAATGAAGTCACAAGTCTTGAAATGTTCTACTTTCAATTTCAGGAAACA
ATTGCAAATATCACAGAATTTGGTCACCAAATCCTTGATGATATTAACCA
AACTATTGATACTGGCATCTTCGACAATGAATGGATTGTGTTCAAATTGG
AAACATTCAAAAAACTTTTAAGTACTGCTGTTAGCATATATGATATATGC
GAGGAGCCAATAAATAGAATCATGTCTATCATAGATTTGCTACAAACTGT
TCCTCGCCAAGAGACAAATAAACCATCAGGAATCTCAGACATGCATCAAT
CACATTCAAGTAAACCTGGGCGGCCAAAAATTCTTATTGACTGTGAAAAG
CTTGATTACTTATTCAATTTAAACTTCACAGCAAACGATATTGCAAACTT
TTTTGGTACTAGTAGGTTAGTTGATTTGTTTCATGATTGATATGACTGAA
ATTTGGCGAGAAAAAAACTTCTTAAAGGGACATTTAAAAAGTGCGTTTGT
CGCCGAGGGGGGGGGTGGGGTCAGCCAAAAAGCGAACGAAAATGAGCAGA
GAGTACTGTAGTCAAGCTTGTCAGTACGTTTACCTTTTTGAGGGGGGGGT
GTGCTCGTAAAGTCCAATACTAATTCTGTTGTTAACTTAGTTGTCCACTT
TGTATTAGTTTGACTCATAGCATTTTATATACATTGCATATACATAAAAT
ATTTCGTCTTTCTTGTAAGAAGAACCAATATATTTTGGAGATCAAGAAAA
TAATGATAAAAAAAAGTCGGAACAGGAATTTAAAAGCTTTTGCATTTTTT
TCTTGGAAACTAATTTTTGCAGTATCAGTGAATTTTGGCTGTTACTTAAA
TTATTTCACCAAATTTTTCTAATTCTGTAGATTCTGCGGTTAAGGCCAGC
AAAATAAAAAAACTTACAAAAATTCGTTCTTTAAAAAAATATATTTTGTT
TGTTTTTTAATTTCTATATGTTTAGAGACACTTTTAATCGTTTTTTAGAA
GAACAATATGTCGGAGGTTATCAGAAAAATCAATGTCAATCGTCGATACG
TATTCTAAAATGTCAGATTCTCAATTAGACGAATGTGTAAAAAATATTCT
TGACGAGTTTCCCAGAACTGGATACCGCAGAATGAAGGGGTTTTTACAAT
CAAATGGACACAGGGTACAAGAGAAAAGAGTTCGGGCTTGTATGCATCGA
GTAGGTTTN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00038976TCONS_00038976Clytia hemisphaericatranscript
TCONS_00038975TCONS_00038975Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00038976-proteinTCONS_00038976-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001980supercontigsc0001980:17733..20741 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.2	1.96	1.18	0.62	27.39	20.26	15.69	15.55	7.7	8.55	10.57	8.66	5.45	3.88	3.6	3.57	4.58	3.68	6.66	5.8	4.58	3.41	2.95	4.18	4.22	6.92	6.05	4.46	2.21	2.54