XLOC_023431 (gene) - C. hemisphaerica

Overview
NameXLOC_023431
Unique NameXLOC_023431
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001980:9887..13614+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023431 ID=XLOC_023431|Name=XLOC_023431|organism=Clytia hemisphaerica|type=gene|length=3728bp|location=Sequence derived from alignment at sc0001980:9887..13614+ (Clytia hemisphaerica)
cAAAACTGTTCATAGCACTTTTATATACACGTTTTCAGAAGCtcgatcaa
ttttttttcgttgagggtgacttttttcttatttttctatttttcagaat
cACTTTTTTGTTAACGAAGGTGTATCGCATGCTCACAATGCCCCCAATTC
TTGATAAAGTAGTAAGATAATAGGTACTTGCCGACTCAAGCTTAGAcctt
ctttaaaattttcttttaataggAAACCTGCCATCAAGGAATGGGCAATT
TGTGACATTTGTCGAGAAGTGATTGATAACTCGCCATCACACCTGATATC
CTGTAAATGCAGGTTTCACAGTGAATGTCTAAATGAATGGATGGAAAGAA
GTTTGAATTGCCCAACTTGTGGCACAAAGTCATGCACGAAATATGCTGAT
AGTGAGATGTATGATGAGATCATCGAACTTTGGTATTATAAATTTTCAGA
CACTGTCAACATAGATATTAAAGATCGATCTGACATCACAATAAGACGGT
CTAAATTATATGAGGACAcaaccgcaaaaatttcaagaatctttaaaaaa
ggacTCGTTCCTCTAAATCTTGATTTCACTGATGAAGATGCTGCAGACAA
TGGTGGACCAACCAGAGAGTATTTTTGTGAACTATTCGACCTATATATAG
GTAAATTGGTCCACGGAGAGACGAGAAGATATACATTTGTCCACGATCTG
GTCAGACTTCAAAATaaagaatatcaaatttttggatacCTAACTGCACT
GGCTTTGGTCCACGGATGTTGTGGTCCACGGTATTTTTGCCAGTCTTTGA
CCGATTTCATTTTAACCGGAAACGCAGAGCCAACCATTGACGAGATTGCG
GATCCAGAAATTAaacagaaacttcaaaaaatcgCGGCATGCCATGATGA
GAAATCTTTTCAAGAGCTAATGGGGGACTTTATGGAAAGATTCGACTCTG
GTTATATGGCTTCCACAGTATCTTTTTACCAAAAAGATGAACTAATTAAA
ACCATGGCATACCATTATGTCATTTCATGTTCGCACCAAGAAATCAACCA
ATTTTTAAGTGGTCTTGAAACTGGTCACGTTCTTTCGACATTAAAATGCC
ATCAAGAATTCAGAAAGGAGTTTGTGTATGACGAAAAGCTAATAGGTGCT
GACCCTGTGAAAAGATTATTTAAGGTAATTCAAATAACATTCGAGATATA
GTACTTTTGTGTTCTCAAAACCTGGGATCAGTACAAATAACAAAAATCTT
CTAGACGTCAATACTTCTGAGCTTTAGTTATAATAATATCATCCTGAGAA
TTTACGAGGTTAGCAACAAGGAAGTATTTCGAGATAACTCATTAATGGCT
TCGTCAATGCTTGCTAAAATTtcgaaatgattttgatttgatttcaaacg
atttttatgtgaaaattttaacaacgGTTTACAAAATCTAACTACACCTT
GAAAAATGCCAATCCCCAAGGTTTATGTGCTTTTCAAGCTTGAAAAATAC
TGCATGCTTTGACTGCCTACCAATCAAATGTCACACTAAAACTGCCTTAA
AAATTGGAAATGCATTGTAAATTGGGCAAATTTCCCCTTTGAAAgtacta
aaatttaaaaagatacaCAATCCTGACCAGAAAAGAGGGCTTCattctga
ccccccccccctatccTATATTTTTTGAGGAAAATTTCCAGTCCCCTTCG
GTTTTTTTGGAAGGCgcccccccccccccctaaaaagtggttcaaatgta
catttgtaATGGATAATAAATGGCTTTTAAAGTGTTGCTCGCACTGAagg
caatttaaaaaaaaattaaatttggcaatgtTTTCCCAAAAAATGGAAAG
TgacccccctacaattaagcacacaagagtTCTTCTTAAACTTGGACATT
TTTATCGTTTTATTTTTAGAACAACATGACACATTATTCTGAAGACAAGG
AAGAGCGTCGATTGGAGGGAAATGTTTTCTTCAACTTTCTAACcatgttt
gaaaatttggaagATTCCCAAATCGAAGTAGATATGCAAGAGTTTGAATC
GGAGAAGATTACGATCAAAATTGTCTCTTTAGCCGATGTATTGAAGTATA
TAACCGGTTCAAAGTACCTGCCGTTGTATAGTGAGACAAAATACTCAGTG
AAATTTATCCATTCTCAGCCTGGGAGGCGCAGCTCTGCTAATAGCTGCGC
TTGTGAGGTTTCGCTACCCATCACGCCAAGGTATTTGAACGAGAAAGAAT
TCACAAATAACTTTTTGGAAGACATGGTTATGAATTCAAGCAAATTTACA
CTTGCTTGAGTGaacttttatttaactttttagCTTTCGACTTTTAGAGT
TCATCTTTgtttaaacatttttatttatttttatgagGGGCCCGTTCATA
AGAGACGTCAGAACCTTAGGGGGTATGGTAATGAGACACTAGCAAGTAGG
CGTGGGACGGacatatttttataaataacaAATTGAAGTTACTTTTAAta
aaaattcgatatttttttcatgGTTTTAATGATGAcacctttttaaaaag
tttttgagttGTATCTACTCTCAGGTGCTTAAAAACGGGCGTCAAATTGA
ACGGGgatgttggaaaaattttttaacttttgttcaTATTTACTATTTAC
TATCcggtaccttaaaggaagaaattttggcggggatttaatttggccgA
TTGCcggaaaagttttttcagaggaaatttaatttggcggatcagcaata
aaactaattttggcggatgatggattttaaagttcaaaatcaaggtgaaa
atgttcaaaatacaccctttttgggcaaaaatagtgaaaaattgaacaaa
atggCGGGAACTTGGCAGAttttggccaaatccgccaaaatttcttcctt
taaggtaccaTAACACAAAAAAGGATAATTatttttgttatcatttttGC
TTGCTGACATTTtcgcaaaattgaaaattttctgatatttttattTACTA
GAACAAGCACGacttttttaatcttttgtttatatttattgTCCAGTGCC
GTGAcacaaaaaatgatatttatttttgttatcataAATCGTTTTTATAG
CGGCTTTGTTACTTCACTTTTGATGGttttaaaatgtaaattaaTGTTTT
TGGTACTTATTATCGTTGTTGTATATTGTTTCAGTATACTTTCGGCGTAC
AAATTTTCCCAAGCAGAAACTTTAGTGTGGTCGAAGAATtgcgaaattta
cgacattgGCAATGAAAATTGGCTTAACATGACAAAGGCTTCTTGTATCC
GATTAAAACAGTTGTTCTTTGAGGCTTTCAGTACTAAAAATATGCTGAAA
TTTTGATCAATGttatcattttcatcttttaatAGAATTTTAGCTTTCAT
AAACTTTAGCGAATTGCCCTgttaagaaatttcaaatacaTAAATTTAGC
TAATATCGCGAAAGTTTTAGCTcccgaaagtttgtacgcctaaagcatAC
CCGTTACTGATCAGAAATAAAACGAAAAGTTAGAATCTGACGAATTCTGT
TTGTCTGTCTGTCTGGTGATCGACCCGTGACTTCTGGCAAAATCTCACAT
GTTGACACTTCTCTTACCCATTGTTGTAAATACTACTGTCAAAATCCGGA
ATCACCTTTAACCGGAGCATAGCATTTTTATAAACTCGTTATCACCTGAG
GAAAATACCTTGTCGGGGGATGGTCGGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00038973TCONS_00038973Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00038973-proteinTCONS_00038973-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001980supercontigsc0001980:9887..13614 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.29	2.29	1.04	0.8	50.59	38.65	21.97	25.08	12.86	18.81	15.51	13.05	7.03	7.78	6.79	6.26	7.58	7.72	10.13	10.41	10.1	10.19	4.46	6.95	14.84	15.66	32.93	33.93	7.14	5.52