XLOC_023425 (gene) - C. hemisphaerica

Overview
NameXLOC_023425
Unique NameXLOC_023425
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001978:24108..30292+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023425 ID=XLOC_023425|Name=XLOC_023425|organism=Clytia hemisphaerica|type=gene|length=6185bp|location=Sequence derived from alignment at sc0001978:24108..30292+ (Clytia hemisphaerica)
TTAAAGCAAACAACATTTTGTCGCAAAGTTACTTTGTTCTTTTAAGATTA AAATCTactaattttccaattttcaggAAATACTGCAAATATGGATGTTT TTGAATCTGGAAGTGAATTTATTATTGACGATAATGATCAGGATCAGGGT TGCAGTGATTCCAATGATGTTACCAATGATGAAGATGGTAAATAtatcat ttttctaaaatgaaaactttttctttgacatTGCTTTTTGAATATGTTAA TCAAAATACGACCTACCAAAATTGATTTACCAGAAAGTAATTTCATATTC Aagttaactttttataaaaatttaagttaagtttttcatcaaaatcgatt ttttattagttttaatGGACATTTTGGATGAGGCGAAAGAATTGCTTGGC CCTGTTAAAAAGCGAACTTGGGGACAAAGAATAGAAAATTCGGAAAGTAA TTGGTTTGCAGCTAGAGAATATTTGCTTGAAGAACTGGTCAAAAGAGAGG AACGACCATCATCGCTATGCTATAAATGTTTTAAAGCTGAAGCTACAATA AAATGTGTTACCTGCTCTCCTTTTTTACTGCTCTGTCCTGATTGTGACTT CGACTTTCATCAATCAATCATCTTCCACGATCGTCAATGGTTCAACGGTT ATTTCAAGCCACTGAAACCAGATGAGCATATTAAAGATGGTGAAATAATC ACAATACGTAAACCTTTTTTTTACTCTTACTGCATAGGATTTGGAAGATT AGAACTagaaataaacattttattcttctttcttttgctgaaaatgttga aaatctgagaattgttgatattttttagcTAAACCAATGCTGTTATTTAA AGATTGTGTCTCATGCGGTCATCTTTGTGATAACTGTGAAATAAGAACAA TGAACGCTCAAATAGCTGTCATTACAACTAGAGGTAATCTTTACAATCAT TTAGATACTTCAATATTTAGCTCAGATATTGTTTTTTACTATAAAAAACC CATGTGAATATCAGTGTtgctaaaattaaaaagaatcaTGTTTAGAGAGT GAAACTTATAAAAGCTAAGTGCATGTTATGCACTTTTTGTTTTAAGATAG ATAcccctttttattttttatttttcttcgttttGCTACTTTTTTTCTAA CATCATTATTATTAATAGAATTAGAAGATActctcaaaatttctttcttt aaggaCGTTTTGATTTAAACAAATACACCCGTATTTGTTGCTGTTGTGGT GAACATACAAACCCTTTCCAAATCAGAACATTGATTCAAAACGGTTTTTG GCCAACTACTCTGAACTATGCGCAGACTATTGTCAATGAAGAATGTTTCA AGCTTTGGGACAGATTTTCCAAACGCATGCCTGGTTCATCACTACAAAGT TTTCTAAGAAGTCTTTCTGATATATCCATTTCAAATGGCagggtttgttt ttttttaaagattgttttGGGTTTAGTTCATCTGGCATTAAATGGCCTAT CAATTAATCTTGTGCTTTTGTGAAATAAAAATAGTAGGTTCTACGCCTGA GAGAGCAACGTGCGTTCCGTGTAGTTCAAGTGATAGTTATGCACCATGGT ATCTGTGTGTCGCGAATACAGATCCGGTGATGTCTGGAGAGCTCTGCGCT TCCTACTCGAAAAAATAGGAAGAAATGGTAAAGTTCCTATCTATAAGAAG AATCTTTTATGTCTCACCTATTGCTCACCTTTTATAATTGTTCTGAAACT CAAATACGCCACCTCAAACAAAACAAATTACACTATGATCAGAAATGGAA GAATCAAATTGACTCCAGTTACTGTTCTACTCTTTGTTTACTTTGTTTTT AGAATGGTACAATCAATGCTAATACTTTCGTACAGGTGTATAGGGAATAT AACTTTGCACAGTATGAAATTGAAAAACGCCTGTCATTTTCTTGGTTTGA CTGTCCTGCTTGCGGAGATCAACAGCATTCCTGTCACGTGGACGGAAACT GCAAGCTTTATCGTTATAAAACATCGGGGAAGTTAGTATCTTTTTTCCTG TTTCCCTTTAGGTACATGTCACTCGTTTTCATAAAAATATGCCGGCAACA AATTACTGAACTAAATAAAAAGGATTTATACAGCATTTAGAAAATGATAT TTTTATGATATGTTTAACTCAAAAACAATTTTGCTCATAATTGAACTACT TGTAATATTTTTCTCATAATTTAGACTTGTATCAAATTCTTACTATGGTG ACATTTTCATTGCCAAAAATCAACATGTAGATGACCTTTTGGAAGAACTG AACTACAATCCAAAACGGGTACTTTAAATAAGTTTTAATGATTGTAAAGT CTGATACTTTTAAACCAGAGGAACTTAACTATCAATTGGTTGTTGGCTCA TATCTCTGTATTGTATTTCTTTAGAACTCAGAACCTGTCCATTGTGGTGG AAGTATTTTGAAAGCAGCTCAAAATGTTTCTAGGAAAAAAGCATCATTGG ATGAAACTGGTTTCGAATATTGTGTATGCAGACATGGTGTTGCACAGCGC GGTGTTAATATGTATAGGGGAGAGATTTTTGGCTATGCCTACTACTTGCA AAAGGGAATCATGGTTGACAACAATGTAAAGTTTATGTGGTATGATGTTA TCTGTAAATATTGGGCATGGCTAGAATCACACGACCCATTCATTAAGGAA GATATGAACCCTGCCCTATCGGTTCTGCATGGTAAAATGCATCAAATGCT TTGTCAGGTTTGATTTTATTTAATTTACCATAAATTTTCATATTTTCTTA TTTGGGCGAGAATTTATTTCAGCGAGTCGCCAATTGTTTTAATCGGTGAG TCATGGAATTTTTTAATTTTGGTGAGTCCTTATTTAGTGCTCGCCATCAA AATTACTATTCTATAGGTATATAAATTGAAATTTTAGGTATAATTTTTTA CGGGCAGTCACAAAAAGTTGATATGATAACAATTGCTTACTTTTTTATTC CTCAGGTTAAATATGGTGGTAGGTGGCAGACAGGTGCTGCTTTAACAAGT GGAGAGGAAGCTGAGCAAGTCAATAGTTATTTGTCCAGATTGACAAACAC TACAAAATACATGCTTCCACAAAGTATGTATAGAATTAGACATTTTAACG ATTTTGTAAGACAATGATGACATTTATTTTTCTAATGATTTAGGTAGCAT TTTTAACGAATTTTTTCTTATGTAATTATGATTCTTTATTCAAAGATCGA GACGATACCATAACTGAGTTTGCTATGGATTGGAACGGACGCAAAATTCG AAATCTGGCAATGACACTTGTCCAAAGATATAAAAAAGTATGAAGTAGTC AGTGTTCTCTGAGATAATATTTTTGATTAGTACTTTCTCAAACATCAAAT TATAATCAATTCGTTTTATCAAACTTGAACCATCCTTGTGTTTTGCGCTT TACTACATTTGAGGAAATTCGAAATGTTTAATTACTGTTTTCTATCTATT TCAGGTTCAAAAAGAATTAGGAAAAATATCTAAACCCACAAACTTCGATG AACTTGAACAGAAGAAACAGGATTTTATTTTAACTACTCAAGGTTTGTAA TTTTTCAAACAAATAAAAAAAGTGCACTATTTCTGCCTATTCTTTTTAAA AGCAACGTAAAAAACCTTTATAATGTTTTAGAATACGCTAAAAAAGGAGA AGGAGATGAAAAAGAAAAACTAATGGAAGAAATAGCAAAGATCAGATTCG AAGTTGCAATGAGAAGTGCCATGATTGGTAAATTTGCTGGTATGTATGCA ACGCCCTACTGGGTACGGGTTTTGCAACAACTGTGCGGTAATAGTTACTA ATAGAGCTTTTACTCGTTTTCAGTCTATATTTTCGCCAAAACTTTACCAG TGACGTCTTTGATGTAAAATAAATATGTCTCTCTTTTTGTTTGAACAAAA TTCAATGGCATAAATTGAATAAATTGTCTTTAACTTTCGTTTTTCATTAT TAGCATCGAGTAAACAAAGAACAAAGCTTAGACGTAAAAATACTAACGAC AACGAAAAAGCCGATAAACTTGAGGCGAAGTTGAAAGAAATCTTTGGAAA CAGTGACAGTTGGAAAAAACACTTAGAGGAGACAGAACGTAAACTTGGTA TGTTATTTCACAAAACGTATTTTGTCCAGCAACTTTATTTTCCTTTTGAT CAGCTCTAACTTGAATACTGAAGTTTTCTCAGAATCTTTCAGAACATGAT ATTGTATTTTTAGAAATCCGGAAAAAGTCAAAACAAACGATTGACGATGG CATGTTGTACCAGAGGCACTTAGAAGAGAAAAAGCTTTTAGTCGAAGAAA TGAAAAATTTTACTAGCCACTACAAAAAGAAACTTATGTCCCTGAAAACT GGTTCGTAATTTTGCTTTAGATATAGCACAAAAATTGCAGAATCACCTAC ACGAGTAGTAGAAAGTTTATGCGCGTGTATACTTTTTAGTATTACAATAA GAAAACAGCAAAGGGTATTGTCTCAGTGGAATGACTTTGAAAAAAGAGGT GAACGTGAACCTGTGCTTTTTACGTTTCCATGGTAACCCATAGTGGGTAT CCCAGTAGGAATTTTTGGGGAGGTGTTAAACTTTTTGCTGGCGGTTAGAG GTTTTTATATTTTTCTCAATAGAATTTCTATTGTTCTTTTTGTTAAGGGA GCTTCTGACCTCTCTGCCCACTAAGTTGCTTTGTAGATTTGAAATAAAGA TTCATTTTAACTACAACCACCATTGTTTTACCACTGACTTCAAAATGATA AATGAAATTATTTTGAAAATATTTGATTTGACCAATATCACTACCTGTAA TAATAAGAACGTTTTTCTCGTTTTTTAAAGGAAAAAGTTGCGCTTTGGCT TCAAATTACACTTCTGATATACACGACAAGCCAACGCTGGAAATGCAACA CGATGTAAGAGTTTATGAACTATTTTCACCAAACTTAATTTATATCTTTT ATATTTTCTGTCTAAGATTCGTACAGTGTAAACTTCAGGGAATTTTTTGA ACGATTTTTACATTAACATATGTTTTATATATTTTTTCAATGAATGTTGA AGGTAACAAACCTACATTTTTCTTTCAGACCTTGATGGAAGAAGGGGAAC AAAATTTGAGAAGGAAAGCTATTGACTTGTGTTCGCAGCAACTATCAATC GGAATCGAACTCTTCAGCAAAGTTGTTACAAATGATTTTTCGGAAATTCC AGACGAAGAGAACGAAAGTGAATTTCCCAAATCTGACCATGAAACCAGCG ACACGAGTAGTGATGAAATAGACGAACACAACGAATCGTGACTTTAATTT GTACACGCCTTTTTATAAGAAAAGTGTACTTTGGATGAGGGTCAAGTGTT CTTAAGAAATTGCCAAAATTGAGGGTGAAATATTCTTAACGTATTCTTAA TTCTTTAGACTTGTTTTGGACTTTGAGCTAAAATTACATTTCTGCCTAAA AGTTTAAAAAACTAAGGAAGTAGTTTTCTCAATTAACCAAACACAAAATG ACTGTATTCTTATCAAATTCTGTGAACTCACCCTAGAGGTTACTCTTAGG GTATTCTTACAATTTTTCCAATTTTCACCCTGATATTCtgatagaagata ttcttacaaaaaaaagcgtgtatgaaaatgaaaatgcttacGTTTATTCA ACTCACATAATACAACAGTACTTTAATTACAAATTATGAAGAGTAAGAAT TGAAAACTTGATTTGGCTATTATGATGTTATTTTATCTTTGAATATCAAT AaaattatgatatatttttaAGACATTATTTATCAAAGTagagtttattt atttttatgtcTTCCATAATCTAGGGCGTCTTTCTTGCGACTAAACATTA TACAGTCTAAGTATTACCAACCGAATCAAACTTCCGAACGTCATATCTCA GTATTCTGATTTCGAGGGTtatatttacaatttagaaTTCCTCATTCTGT ACGATGATAGTCCTTATCCTCGTATTTATTCGAGTTGTTagatatttata tattttatacacaCATCATATACTTTATATCAACACTTTTCTTGTAAGAA AAACCAATATTTTTGGAGATTAAAGAAACAATGTTAAGAAAaaatattat gctgatataagcacaATAAACCTTTTCAAATCGCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00038961TCONS_00038961Clytia hemisphaericatranscript
TCONS_00038962TCONS_00038962Clytia hemisphaericatranscript
TCONS_00038963TCONS_00038963Clytia hemisphaericatranscript
TCONS_00038964TCONS_00038964Clytia hemisphaericatranscript
TCONS_00038965TCONS_00038965Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00038961-proteinTCONS_00038961-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001978supercontigsc0001978:24108..30292 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.37 2.92 0.73 0.59 18.53 12.87 23.27 27.83 17.89 22.53 19.88 16.34 26.11 23.58 14.74 19.3 11.03 11.43 19.29 22.69 12.14 11.8 6.23 7.59 74.82 71.53 19.68 16.68 12.65 11.01