XLOC_023395 (gene) - C. hemisphaerica

Overview
NameXLOC_023395
Unique NameXLOC_023395
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001969:11331..21358+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023395 ID=XLOC_023395|Name=XLOC_023395|organism=Clytia hemisphaerica|type=gene|length=10028bp|location=Sequence derived from alignment at sc0001969:11331..21358+ (Clytia hemisphaerica)
GATATCCATAATCTCTCAAGTAATGATCTCGGGTGGAAAAGATAATGATG
GTACCACGCCCCTTCGCCCTTATTATCATTTTGTCAAAGAGTTTCTTGTC
ACAATGCCCTTCAACCAAAACTCCACAACATACAACAAGCTGGAATCTGT
TCCGAAGATATTTGGGAAATGTTTCCGGTTTTCCAAGCCAAAGCTCGATA
GTCTGCTTGTAGGATTCCTTAGCTTTTGCTTTGGCCATCATTTCAACGGA
AGCATCAACACCAAAGATGTTCTTGAATCCTCCAACCTTGAAAAGTTGAT
TTCCTCCAAGCCCAGTTCCACAGCCCATGTCCAGAACTTCAATCACCTCT
TTTGTCGCTTGATCCGGGATAAGCTCACACGCGATCTCATTAACTTTCTC
ATGATCATGATAACCAATTGTTAAGTACATCTCTTCGTAACTTTCAGCCT
CCGCATTGTAATGTTCCACAATATCCTTGGCNTTATCGTCCGTTTGTTCC
AAACTATACTACTACTTTTTTTGGTAGAAAGATTtatcaatcaacaaaaa
ctttttgttttatccttattaatttcgcctagcgaaagtattacgatcag
CTTCTGTGGTGGCTCGTGGTTTGGtggattttttttgagaaaacgaaagt
acttgatacggttgacgaactcactaaaattgatttacaaattacacgct
cgtataaccatgAACGATTTTCgtaggttttctttggattacgtcatata
tctttgtgtctctagcttcacagtttttgttttttctttattttcttata
agcatatactttataagaatcaaatcaatagctcttgatagacggtgaca
tacctttcggtaattaattcttacaaagtaaataagggacggcgctcaat
atgagcatattcatttttcttataagcatttactttaaaagaatcaaatc
aataactctcgatagacggtagtatacctttcggtaattagttcttacaa
agtaaacaaaggacggtgcacaatatgagcatatttatttttcttacaag
catttactttataagaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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ttgtttttgtgaaattgtttcatcaaggctcgatgtaaagtagatctcaa
gttcttatttttcccatgcagttcaaattctaggcgaaattttcgacttt
aagtcgtcttgttgtATTTATGATCTGGTCCTACAGTCAAAATTTTAGGT
CTGTAGCACCACTACAGTCGGAATTATGTGAATTCCGATTTGCGGGATCT
AAGAGTAAGAGGGgatttctagggattttgagggatctgagACAATGAAA
GTGCTCTGTTTCAAGAAACCTTATTATAGTTTTCggaaattttcgatttt
agTCTAATTCGTATTAAAACTCgagttataaaaaaaaacgagtcAAAGTT
TCCCCGATTGTTCATACTTCCAGTACCAGATCACCTTGGTTCATCGATGC
GGGGTTTGAACAAACTTGAATCCAGTCCcttatttcacttttttgtgatt
AGGAAGGCGCTCATAAATTGTATCACGTCCAccagtaaaatcaagaaaat
gaaAGTCTAGCGGGTGGCTCTAGGTACGAGACTGGGATTTGAAGCAGAAC
AAAATGCCAAATGAGTGCGGATTTATTTGATATATCTTTTTGCTAATCAA
CTCATGCAATGACATAAACCATTATGAGATCCATCCTCAATCATCTTAAA
TGGAGATGTGACAGGAGTCCGACCAACCTGACCCACTAGCTACTGAGCCT
TTGCCCGATGAAAACTGAGTGTCATCAATTTCAATAATCTCTGCTTCTTG
TTCTTGAGAACCACTTTCTTCCGAATGATCCTTCTCCAAATGTAATTCCG
ATTTCTTTCTCGCTAAAACCGTTCCATGTCGGTTTACATCTGATGAGGGG
AGCTGATTTTGAACATATTTATACGAAGAGATCTGTATTATATTGTCTCG
TTGTAAGTCTAAAGATATTTCACCGCCACTTGCGCTACCCGAGGTCGTTT
CTCCGTCACTTGCGCTACCCGAGGTCGTTTTGCCGTCACTTGCGCTACCC
GAGGTCATTTCACCGCCACTTGCGCTACCCGAGGTCGTTTTGCCGCCACT
TGCGCTACCCGAGGTCGTTTTGCCGTCGTCGGAATCTTCAGTCTTCAGTT
GTCCATCATCATTGCTTGAGAATGGTTTTCGCTGATAAGAAGAAGTTACA
GTTGTTGGTAGACAGTGGTAACAATCTTTGNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNGGGGCGTTTATTTAGCACCTAAGAGT
AAGCTTTTAAACACATCAATGTGGTTGCTCGAAATTACTAGCCTTAGGGA
TCATCGTGATTATAACAGGCGGTCAGAAGAAACACGAAGATCCTTTTAGT
ATCATACCGTACTTACCATTGagtttggatgggaaataagtggcttcatt
tcccatccagaagtcTATAGTAGTATCAAGCCctatagcccttcgggctt
ggactTCAATGCTATTTACGCATAACAATCTAAAATTTTACtaaacaatt
aaataaaaacttttccgcgaaaaaaaattaaatctccGAATTCGAGAGAC
GAACCGAGCTGACTTGCTTTGATTATCTCTTTTTTCAAAGCGAGGGTACC
GGCAGCACTATCcgcatttttgttattttggccCGTTTGATTGTTGAGAC
AGTTGAGGGAACTTTTTGACTTTCAGTgtaatttaaaaagtgaaaagtca
cAGTGAagcataaaaataataaaagaaaacaGCAAAACGAAGGAAGAACG
AGTGGAGGCCCCACTCCCCGACTTGAGTGATAAATTGAGAGGGCCAATTC
TCGGGTTGATTAATAGTAAAACCAACCATGGTTGCCTCGCCTTTAGAACG
ACGGATTCTATCTAGCAATTTCATCGTTTTTAGCTGGCATATTTCAAATC
TAGCGGTATGTTTTACTTTCAATACGACGTTAGTGTGAAAAAACACACGG
ATCACGTATTTTAGATGGGAAATAATTGACTTCTTTTCCCATTCAAGAGT
TCCATCTCTAGCCTAACCTCAAAATATCATGTAATTTTACTATTTCGTTT
TCATTATAGTTGGAAAACATGGTGAAAAAGCGAAGTCGGCGCTCCTTGAA
GAGGGATTGTAAAGCCATGATGTGCATCAAGAGTATTGTCTGTTTTCCTG
AACACACTGTCAAACACTCAATTCAAAAAGCCTCCTCCAAGAAGGCCTgt
cgaaaattgaaagcaaGCGCGCTCAACCAGATAAGAGATGCATTTTTAAA
CGGAGAAGCGATCGGCCATCCAGCGTTTTGGTTGCATTACCTGAAGCTCG
CACTACGCATGATCCATTTCCTGAAAACGTGGAGGAGAGGTTGATAGAAC
AACCAACAGACAGTATGGATGCCATCACTCACATCTTGAGCGTGGCCGCA
CGTTACGGTAGTAAAGTACAAATGTCGAGTAAAGGTACGGATAACGTATT
GGAATTACACTTGAATCAGCCGTCGGCTTCCGGGGAGGAGACTGGCTGAG
AGAAACATTGTTGGGATCAGTGCGTCTCGCACAAACAAAATGACGGAAGT
AACATGACGGAAACAAGTNCGGGAGGAGACTGGCTGAGAGAAACATTGTT
GGCATCAGTGCGTCTCGCACAAACAAAATAACGGAAGTAACATGACGGAA
ACAAGTTGAATGTTTTAAGTTTCGAAGTATGGTATAAGTTAGTGTAATTT
TCTAGTAGGAGCAACATCATTTGCCTCTCAAGGcatcttttatcattttc
tcaGTTGGTCGACCGAAATTGGGCCAAACTTGGTAAGCAATTTTCGAAGC
CCCCTattaaaatctttgtaaaaatgACGCGATCGGAGCGAGCACGCgca
caaattttttcttttgtgctGAATAAAACTGCTCATTTTAAGGCGCAAAA
AAGCAAAAGGGTCGCCGAAATTATTAAACAGAGGCCTTTTTGCACCCATT
CTCTATTGGCACCCCCTCCCAAAATTAATCGGCCTCTTGCGGTGGAGGCA
CGCTACTGGGTAAGTGGTTGCAACAAATCGATAATACGAGGGTTTAAACA
GAACTATGTATTCATTCTGAACAGTAAATCTTCAGGGTATGATAATTAAA
TGATTGTATTACTGTGTACATTGGGATGTTCCattaaaaaccatacaggg
gggtggacgaaccttttcaaaaattattgaaaatgtgtggataccccctg
gaaaatggcaaaatttgcaaaaacacccttggaaaaattctcttacacct
taaagtgagggtggaggaggtaaaatcagtcttttacccctggaaatttt
tacccctttggaaaaatgaaaaaacaccccctctcggattaccctctgga
aatgttcgtccaccccccctgtatggatataaaattgaATGACCCATTTG
AACATATCAGAGATGAAATGAACCCGTTGACTCggctttttcatcttcat
tcaaCAGATGAAAAGATGCCTAAATATTTATAGatctgaaaaaatttgaa
tttttattctgtaaatatatttatttcaaatatcaatattttattattct
AAAGATAAATGGTCCACGGATCCATGATAAGAATAATTTTCGTGTAGCTT
TGGTATTATGGTGagggttttttttcaaaaggtcaAATTTGATAGTCAAG
TTTTCGTCGTTTATATTTTTGCAATGTGTATTTCTCTGTTAATACAAGAA
TCATACGGGACTGGCTTCTCAAAAGTAGAAAGgaattttggaaatatttt
acaAGCTTGTTTTGTATTCTTCTTCAAATTTCATTAAGTTTGTTTCTATT
GGGTTTGAAAATAAGGAAGGCGtcgtgaaagaaaaaaatcactgtaTCCC
TAATGAGTGACTGCGAAGAATTCTCTCCCGTCTCtcaaaagaaagagttt
tttcttctttgttcaTTTTGGGGACTTGGTGTTTTTCCCTCctcctttca
aaacaaaactctAGGCCCTACTtataaaatgataattttcaatgtaaaaa
aaatgtagaaaatggCCTTCTAAATTACTTTATTATGCTCGGGCTGTAAA
GATTTTGGAAAAGAAGTTGACCGTGTAATTTTCCATGGATGGGGGAGTGA
CGAATTTTGATCACATTTTCATTTCATGGAAAATTACTTTGGGTGAAAGT
TTTTTTCCCTTGATTTTGTTGTTTGATTACACTTACATGgcatcacattt
tcaaaaactgcaaCACGAAATTACGTAATTGCAAACCACAGAGTTTGAAC
AACTCTCATTTTTTTTGacgattacacgttttttttttataagaacaaac
tatataagaacataaggcttcaNGCAAACCACAGACTTTGAACAATCAGA
ATATCGCATTAATAGTCgcattttgagagattttatgattttggttTCAA
GAGATGAATGTAGAAGTCAATGTCTACCTTCAAGCTGAATAATCAGTGAT
ATTTGTAACCTGGTGCTATTGTGAAGTTTTCCCTATCCTTTTTTTATTGG
CCAATCTCACGGTCGAAATgtatcatgggtaatcagGACTTTGCTTCAAT
AACGGTTACCGAAGCggtgattacccatgattccttTCGACCTTGAGATG
GCCTTCAACTGAGAGCTAAAACCACTTTGGTATGAAAGCTTTGTAGAAAT
TCAGTTTGTCTCCTTGAGGCTTTTAAATGTTGTATTTCTGTCGTCCTAAG
TGATGTAATTTAATACCGTTTGTTAAATCTGACTCTTAAGAGCAATTTAT
TAGTTCTTGTGTCTATGGCAACCAGATGAAATGCTAATATTACTTAAGAA
CACGTCTTACGATAATAAAACTGCAGTTGTATATTTAAAActggaaaatg
caaaatacCACAGCCTAAACTTCAGAACTAATCATTTGGAGAGAGATTTT
CCTTAAAATATGATGCTCAAATTGCTTTTGTTTGGGACTTGTGCCCCTCA
CAAAATTTCAGTTTTACTTCCTCGAAGATCAGAATAGATATTTATGCTTT
AAATGTTACAAGTtttataccgttgaaaagataagctAAAGACTCTAGGC
CGCTAGAGAGTTACCAAACTGTTTTTTGctgcttatttttttcacttcaa
caAACAGACGGGTACCATTTGAACTTACAATGCGAAAATTATTTGGAAAA
GATAACGAATaaaagaccttttcataaatcacgTCACGAACAACACTTAC
ctcgttttgaaaatattgccatggtgattaactcccagtggTTTTATTAA
AACTTTTACTATTAAAACtattctattcataaaaaaatcatttcatgtgt
caagggacataatcaccatggtaattgtttggaCACGAGGCAAGTTATGT
TAGTGGAAAAACATtcaatagtgaggttaagtaaatcggtaaaatcacga
cgacgaacgaaaatttaacaggctagtgagtttcaaccaatcaaatttcg
tttttccactagcctattacatttttcgtccgtcgtcgtgattatcccgg
tatacttaacctcactaatgaattaaaaaaacgaaaaagttaaaatttta
ttagATTGTTCATTTCGAtattttggtttgaatttctAATGCTTTATGAT
CACAAGATTTCATAGGCACAAATNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCATGATAACCAATTGTTA
AGTACATCTCTTCGTAACTTTCAGCCTCCGCATTGTAATGTTCCACAATA
TCCTTGGCATAAGGTTGAACCTTCCCTGACCATTGAGTCGTACGTTCTAC
AGCTGCTTTAACTGTCTCGTTCACTTTGGTAACATCGATGATTTCAACTG
TTTGCGCCATCTTTCCTCTGCTCTTTATTGTTATAATCTAGAacgaaaaa
aggttttttaagtTGATGTCAGTTCCGCAAGTTGCATAGTTCTGCAGCGC
TGCAATATTCCGTAAAGTTGCGTTTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00038929TCONS_00038929Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001969supercontigsc0001969:11331..21358 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.84	0.35	1.03	0.89	3.84	2.39	13.57	7.97	72.17	67.68	59.72	30.89	16.09	14.51	34.64	59.63	18.77	9.16	8.53	8.33	49.64	49.84	97.89	131.02	85.19	47.43	29.87	20.95	312.37	191.98