XLOC_023357 (gene) - C. hemisphaerica

Overview
NameXLOC_023357
Unique NameXLOC_023357
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001956:9252..12751-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023357 ID=XLOC_023357|Name=XLOC_023357|organism=Clytia hemisphaerica|type=gene|length=3500bp|location=Sequence derived from alignment at sc0001956:9252..12751- (Clytia hemisphaerica)
ACATAGGATATATGGAATCTAAAGTCCGAACAATGGTCATTGTTTTGCAT
TGTTCTTAACAATGTCTTCGCATGCGCACACTTCGTCGGCGCGAATTCTA
GCGGGAAGTTCAAAATGGCGATTTTCTTACACTGATTAGTTCCTGCACTT
TTTTTGGTGACGCGGGAATTTTTTTCATATTTTGACTGATTTCATCGCAT
TGGAAAACCCAGTGAGGCTTTATTTAAAAGATTGTCTACCCCTTTGGGGT
TTCCCTTTGAAATTTGACAGATTGGACTCGTTTATCCAAAATTATTCAAA
TTTGTTTTTGTGGTAGTTGCACGAGGAGACACAAGTTAGAGAGAACTCAG
GTGAGTTTTGANCCTGGTCATATAATACAAGACTCTAAGGATCAAGGATT
ATTCTGAAAGGTACTCACTTGATTCTGGTTTCATTTTCTAAAAGATTTAC
TTTGGATTCAAAGTAATGTTCTATTTGAATAATTTGCTAAAAATGGCCAC
GTTTGTTATAATTTTATTGTAAAATGTCCTCTGAAAAGAGACATTTTTTT
CTCAACAAAGCCAATTCTATTAGCTGTTCCTAATTTGAGAAGAGCTTTTC
TGAGTGAGGACAAAGCAGTGAGCAATTATTGCCCTTGCCCAATCCAATAG
CAACCATTTAACTTGTTTTTCTTTATGAATTTCTAAGGTAGCCGCCAGGT
TTGGGCTCGACTATTTCCATGAGAAAACCAGGCTATACCCGACAGCTAGC
TTGACTTGAAAGTGACTTCTAGTGTCAAAGTAATAACAAAAATTACTTAT
TGCAAAAATTTTGGTTACATTTAATTTTATTTTTAAATTACCTCTGTAAA
ATTGATTTGCTTTTATTTTGATCTTTCAGAATGGCCGAAAACCATAATGC
TAAGTTGCAAAGGATTTGCAGAATATGTTGTATGGTGATCAAAACCGATA
AATCTTACACCGAAAAAAGACCTATCACCGACTTTACAACCGAGATGAAA
GCATTGTTTGACATTGATGTGTTGAGTGATATTCATGCCCCACCTTATCT
TTGTGGAAATTGTAAGAGAAAGCTTGAACTCAAGAGAAAACATCCGCAAT
TCTGAAACTGAATTGTTTAATTTTCTGGAACATCGTGATGAATGTGATGT
TTGCAAAAGATTGGTACCAATACGCTTTAGTTTAAAGACAGTTGCACCCT
CACTTCCTAAATTCGAGAAAATTGGTAATGATTATGGCTTCCTTAAATTG
AGGACTGATGAAGACTTTCTAGTACTCTCAAAACCAGTAAATCTAGAAAA
CACAGTTAAAATATATATTAACTGTCAAATTGATCCTAGTTGTCAATGGA
AGGTGTTTGTCAGTAATAGACAGCTTGCAGCTCAACATGAACTTTACCAA
AAGTTTGGTTCGGTATTGTCAATGAAAAATGCTAATGAATTTTTCGAAAT
GTTGGCATTGTACAATGTATGTGAGGGTAATACAAGATATCAGGAACTTG
TCAAGAAAAAAGTTGATAAAGGAAGTGATCTCACATTTCTCGACAAGCAA
GGAAAAGTTGCTGCTTGCATCGAAGCACCTGGATTCAACCAAATCCATCC
AGACAAGCTTACAATCCGCCATGTAAACTGTGAATTGATTTCCAAAGATA
ATATTAAATGTAAAGTTTGTGCAGACTATGGACGTAAAATTTTATCTTCC
ATGTCCAGCAGGGCTCAAAAACTTCCAACGACTAACCACCCAAACACTCC
AAATATTTATCTCACTCGCCAACAATTGGAAAACAAAGCCAAAACATTGC
AAAGGGATAAAAGAGAACTGCAAAATGAAATTAGACGCTTGAAGACTAAA
GTAAAAAAGCTTATGACTAATGAAGCTGTGGCATTGCCTGATGAATGGAA
AGAAGTCATTCCAGCTGTTTTTGAAAGTAATGATGCAGGTTTTCCAGCTG
ACACACCCCAAGGAATCTTATGGGAACAAGAAACAAAAATATGCATCCTT
GAAAGATAAAAGGGGAATGCGCTGGCATCCTTTAATCATTCGATGGGCAA
TCAGTATCTTCTTGAAATCTCCAGGTATGTTTACAGATCAAGCTTGAAAA
AAAATACCGTAAAGGAAGAAATTTTGGCGGGAATTTAATTTGGTGGATGG
CCAAAAAAGTTTTTTCAGAGGGAATTTAATCTGATTTAATTTGGCGGATG
GACGAAAAAACTAAATTTGACGGGAATTTAATTTGGCGGTCGCTTAAAAA
TTTAACCTTAAGATGGCGTCAAAACAGCAAAAAAATGGCAAAAACGCCTT
AAAAGAGATCATATTTTCAAAATGTTTAATTTGGCGGGAATTTAATTTGG
CGGATTGCGGAAAAAAGAAATTTTGGCGGGAACTTAATTTGGCGGATTTC
AGTCAAATCCGCCAAATCCGCCAAATTTTCTTTCCGCCAAAATTTCTTCC
TTTAAGGTACATAGAATCTACAATGTTTTGAATTTTGAAAACATCAAATC
CATTGCAATTTTTTAAGAATAACTGTGGAAACTAATGATTTACATCCCAG
TGAGAATAAAGGGGCTTACTTCTGATATTAAAAACAGAATGACCTAAGCA
TAGACCTTTTTAATAGGGAGAGTGCCAAATTTTTAGGGGCCTTTGTAGGA
TGGCACCAACATTTACCAAAAAAATTGGAGGGAGTGGGAATGATGGATGA
TTGGTGGGATCAAAGTTTTGGTCAATTTAGTCATATACAAATGACTACAG
GCTGTTTTAAAGTAAAAGTATGTACCAGCAAATCAAAAATGTGCATCATG
TTAAATAAAATGCTAGTTATTGTTATATTGTGGAATTGTTTGCTTGTGTT
TGGTGATGCATTTAGAGCGAGTTCTTCTAAACAAATTTTTGCTGCAAAAA
AGGGGGAATTAGTATAATGGGGGGATGAAATAAACATAGGGGGGGTCATA
TCCCAATGCAAACTATGCTTAGCTCTACAAAGCTCAAAAAATTGACCTAT
CAAATTTTATTTGAAAATGTTCATTGTAAGCCTTTGTTTATTTTCAGCTA
CTTACAGGCATCTCAAAGCTGGAGCATTTCTCAACCTACCCAGTGAAACA
ACGCTGAATGCCTACAGCCAGTTTTGCAGCACGAATACCGGTTTTGATGT
TAAAAAGATAGAGCAACTCCTGAAAGAAATTAAGATAGACGATTGCAAGG
ATTATGAAAAGAATGTTGCTCTGGCGTTTGATGAAATGCATATCAAATCG
GGACTAGTGTATGACAAGGGATCAGGGAAGTTGATTGGGTTTACAGACCC
TGGTGACATCAACACTGAAATCGAAAAATTTGAGCAGCAGTTTGCTGGCA
GCCAAGAGCGTCCATTATCCACACAAATATTGTGCTTTATGGTGAGACAG
GCCCGGCGGAAGCGGGGAGACTGGGGAGACTTCAGCCTCCCCACTTTTGA
GCAATTGAGATTTTTTCACAAATCTTTAGCGAATTTTATCTCATTTTGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00038883TCONS_00038883Clytia hemisphaericatranscript
TCONS_00038882TCONS_00038882Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00038882-proteinTCONS_00038882-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001956supercontigsc0001956:9252..12751 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.13	0.87	0.72	1	5.24	4.62	2.43	1.9	1.71	2.55	2.17	1.88	1.19	1.17	1.64	1.6	1.83	1.12	1.05	1.26	1.7	2.2	0.95	1.47	0.58	0.74	2.51	1.26	0.35	0.51