XLOC_023293 (gene) - C. hemisphaerica

Overview
NameXLOC_023293
Unique NameXLOC_023293
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001935:26863..30410+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023293 ID=XLOC_023293|Name=XLOC_023293|organism=Clytia hemisphaerica|type=gene|length=3548bp|location=Sequence derived from alignment at sc0001935:26863..30410+ (Clytia hemisphaerica)
CAAATACATGATTTTTGTCTTCTCGTTATTAAGACGGATCTCAGCAATGT
ACAAATGATTTCGGTCAACTAATCCAGGAAACATTATGATCTGGTTGCCA
TACGTTCTAAAATATTTAACGTTATATTTCTGACTGAAAAATGCCTGAAA
CGGCACTGAAACTCtgagtatcggaaaataaatttgtctctATTCTTGAC
TGATGAcgttatattttatattttcaaactttacagAGGTGAACCCCTAC
GATTACTGTTTGGGTTCACTGGATTGCCGTATCGAACATATGTCTGCTGA
AAGCGATGAAGCTAAACTTATCTCAAAATACATATACAGAGAAGGAAAAA
GCTGTGACGCAAAaggtattattttttcaaaattttattcatcAGTAATT
TAATTACTCTACTCAATGGTCGCCTCAGCTAGTCTAGATTCAGTTATATT
TAAATTGACCCACCAACGATTTTGAGTTCTTCAAAATCTTCAGTTTCCAG
CTCATAATCCTCTGGCTGCTGGTTCTCTATGTCCAATGTGCTATGAGCCA
TTGTTGAGTTGTAtatgttgttataaaaataacAGTTGTATATGTTGTTG
TAAAAATAACACTTGTGAGCAATGATTTGATGATAACAGTTTGAATTTCA
GAGATACTTCGAGTCAGTCAGCCAGTTTTCCTTGTGTTTTTGTACTGAAA
ccgcaatttttaaaaatcggaACATTGCTAGCCTCGTTTTCAAGTATTAc
gcaataatttatgaaaagccgTATTATTCAGCTGACAAATGATGTCATTC
AACTCTCATGTGATCTTGAGGAAGACCCTGGATGTTAGACGTTAGGTAAA
CGATATTTGATACTTGATGGAGCGGTAGAATGATTTTTAGCTTAATCTTG
ATTCTGATGTAATGTTGTACTAACTGCTTTTTGTTTTCGTTTGTTTTAAA
TTGCATCTTGGAGAAAGTGAAGATGAGACTGAAGAGCAGGAAGATGTTTG
AAAATAAGGAGAGTGATATATTTGACAATCAAGATGATGATTCCACAGAT
GTGGAGAATTACGAAGGCATATTCTCATTTCCTTGTTATTGTTTTCACTG
GTGCAATTTACTAAATTTAGCGTTTCAGTCGTAAAATTGTAATATTAACT
TATTAGCAGTCTCATTAAATACACAATGGAGTATGAAAAACTATAGAATA
ACACGTTAGTCGTGAGAAAAGCCCCacatgttttcttttataagaacaag
ctatataagaacagaagGCTTCGATgtccaaaatgctaagaacaagttaa
gaacattaaggCTTTGCAGATTCGAAAATACCCGATTCTGAAAATGGGTC
GAAATGGACACAAAATGAAGAAAGTAagaaacatgttaaaaacattttta
ggcttaaaatccaaaaagttaagaacgttcttaaaaaaagaaaaactgtc
ATTTTACCATTCTTGACACTGGATTAATTCATAACTCAAGAACGCTtaat
aaatttcaagaaaagatCTTGGTTATCTTTTTCAGGTGAggcacaaaatt
ttgaaattaatatgGTTTTAAACTTGCTGTCTCTTCACAAGGAAAATAAG
CAAAATTCCAATCTTGCGCGCACGAAAATTTACCTCTCTTTCTCTCGTTT
TTCTTAGTGACCGGAATGTTCCGCGTGGCATGTCAAGAAGACACTAAAAA
TTACCGAACAGATCTCAAGAACAAGCGTTTGCTATTCCACGGAACTAAAA
TGGCGCATATCATGAGTATTTTAAAGAATGGTCTGCAAATTGCACCCGAA
GGATCGATCCGAAGCGGCAGCGCTTATGGAAAGGTAACAAACACGAAGCA
ATgtgctgttccattaaaaatccatcaaggaggggggggggtaaacaaac
cttttcaaataaaaaataattcgtGGAAATGTGTGGCAAAATGGCAACAT
TTATAAAGAAACTCTTAGAAAAATTAACTTCATACTTTGAGGtgacggtg
gacgaactaaaaccaGTCTTTTACCCTCTGGAGATTTTTGAATAGGTTTT
AACCcctagaaaaattttaaaacatttctttgacccctggaaattcttct
ctcGCTGTTTGGATACAAAATGGGATGGCAAGAAACATGGGAAATCCAAT
CCTTTATTTCATCGATGCAATACACCTAACAACCCTTACAATGCGGTCAG
TATTTGAGAGGATTGGTAATGAATTTGCAAAGGTTTGTGGGACGGCAAGT
CTACTGATGATATGATCTTTCTATTTTCCAGGGAATTTATTTCAGTTATG
ATTTTGAGACATCGAATAATTATGCACAAGGCAAACAGAACAAGTACATG
TTTTTATGTGAGGTAAGAATCTTCAAACAGTAtaaggccaaaatattaag
aacaagtcaatgaaatttaaagtccctgccaacaagaaactctcataaat
gacGCTTCCTTATTCGATAAGGTCCCTTTTATTCGGTGAAAATTCAATTt
cccttaaagatcgaattagggagcgtcaactgtaattatttttttgatta
tcGGACTTTTTGATAGAGTGGTTTCAAGATACCTTCTCCAAAAAAGAGTC
TCCGCGACCTTTTCCCTTGGATCTTAAGCGACACAAGAAAGCCTAAGCAG
CGTAAAGGCCCAGCAGTGTTGGCagtgtcaatatatttttcgtCGCAGAG
TATCGCCATACAACTCAATTTACAggagtgaaatttttcaatgtaTAGAC
TGGAGTCGGGAGAGAAATAAAGATTTAGATGCATTGATTTTTTTAGATAA
CTCTTACTAATCAAGCATGCGCACAGTAANTCAATGTATAGACTCGAGTC
GGGAGAGAAATAAAGATTTAGTTGCATTGATTTTTTTAGATAACTCTTAC
TAATCAAGAAAGGAAGATTTGAACATATAACTTAAGCATGCGCACAGTAG
AAAATTAGATAAttcgattttagcctggaatcgtcaattgataattgcgc
gcataggccccgacaaagtcaaATCTTTTCGACCAGTTGCGTTTTAAAGG
CCCATCCCGCTGCGCGCTGGGCCAATTACGGTCTATCATTCTTCGGCCTC
TTAAGGAATGTTCTTATTCACTTTACTATGCAGGTATCACTCGGCAAATC
GTACGACAAGGGGAGAAATCACAGAGGAGGATCATATCCAATGAAAACAA
CACAAAGTACTTGGGTACAGACACAAGAAATTCCTAACCCCGACAAACAT
GTGACCATGTCATACGGAGCTAGTCTATTGTTAGGAGAGAATATTCAAAA
CCCTGACTTAATCAATCGATATCATTATTCCCACAATCAACCAGAAATCA
TTGTGTACGATGCGAAACAAGTTAAGATTAGATACATCATCCAATACAAA
TAAACATGGCAAATTTGAGCCTTTGACCCTTAGGACCCATATAGATATAT
AAAACACTAGTTAGAGCTACTCTatatttcccaagcaacggcaggtgaag
caaaaaaatgcaccataTTTGCAGAAAGTAGGTCACAGTCACTAAGCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00038809TCONS_00038809Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00038809-proteinTCONS_00038809-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001935supercontigsc0001935:26863..30410 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.04	3.27	3.82	3.84	9.48	6.45	8.19	10.71	3.86	7.26	6.63	4.24	4.48	6.04	3.6	4.29	5.35	4.91	5.24	5.74	2.71	2.3	2.56	2.46	5.39	7.04	3.43	1.27	3.79	1.86