XLOC_022130 (gene) - C. hemisphaerica

Overview
NameXLOC_022130
Unique NameXLOC_022130
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001616:15927..21274+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_022130 ID=XLOC_022130|Name=XLOC_022130|organism=Clytia hemisphaerica|type=gene|length=5348bp|location=Sequence derived from alignment at sc0001616:15927..21274+ (Clytia hemisphaerica)
gagaaaatggcggaaaatggagctgatttttttaaatcaactaAAGTTCT TCATCCACCATAATCAAGTGAATATTTGATGGATTTAGTGGAAGTCTCCA ATCACTGTTACGATGGAGATGTTTTGCAACTACTGGAAGTTTTATTTTGG TGAATAATTGTTTCAAAGACATTCATTTCCTGTCTTCTGTGGAGGTATGT TTTTCTTTCAGAGTGTTACCGATAATCACAttacattttgtttttaattg atACTAGGAAAGAAATGTAACTAAAGCTTTGAAGATAGTTTAAAAGTAGT GCCTAGGAATGATAAACTTTATTTACAAAGCTCATTTGTAACTTGAGTAC TTGTATTGAACCAACTGTAAACTTAAAGTCTCCCATCTGATGGAGCCATA TCCAAACTCAAAATTGCCAGGGAAAATGCCAATTGGATATTATTGGGGGA TGGTAGGTGTAGCTTGTGGACATTACTTTTgacaaagaaattttcacaag aAATATCAGTTTTAAAGTTAAGTTATTTTGTTTGGGTTCTCTTTGTTTGA CGGCCTGCACGCTCACAAATATTtgacgaccctggacaccgcctTACATT TTGCTGTGTTGTCCGGTGGGCGTTTTTAAATGTATGGTGGGATTTTAGGT TAGAATTCCAAAACACCGTACATTTTCCCACCGGAAGATGCATACGTACA GTTGCTTTTTTTCTATTAGATCGCTCGTAAAAACGGTCAAGGGCGGCTAT ATTGGACAAGTACTCCCATCGTTCATTGTACAGTGTAGCCGCCGTACCTT GCACAGTGGTCAAAATAGGTTGACTTGTTCCCAGCGTACGCCCATCGGAC AACACTGTacaatgtacggcagtgtcCAGGGTCATAATCTTTGCAGGTAG TTACCGGTTGCCGGTTTTGTTCTGTTGCTTTATACCAGACAGTCTTCATC GTTAAAATTGATCATGGATTTAAATCGATACAATAGATTTAAATCGATAc aatcgatattaatcgataGCTAACTGAGgttaaaaaatggaatatcAATT AGCCAGCATTTGATACAAATATCGATGAGCAATCAATTAAAATTTAAATG AGATATCAATTAATATTGATTACCTCAAAGTAGTGTCTATAATCAATCTT TCATCGATTATCTATCAATAAGCTACCTATTGTTATCGACAAACGATCAA TATCGATTACCTTATAGTATCGATGGTGTCGATTACTAATTGATACAAAA CATCTATCAATTAATGAATGTTATTGCTGACCcaaaaaatataagcactt TGATTGGTTTAGAACACAaaatatttgcgatatttcatatttctccaCAT TAAAAAACATCTCTGGAAACAATTGCAAGAACTTCTCATcttgttttgat aatttctcCCCTCTGAGAgttagttttttcaaaactcattttgaatattt tttttctcgaaaagttcATTTGAATGTTCAACAttcgaaaaaacaaaaaa atgcagaACACAATAATAGacagaatcaaaacaaacaaaaaattgacata aaagatttttttgggtgacaataaattagttatcgcaTAACTTCTTGTGC AATACTCAATGTTTTACTTGTTCTGATATTTTACCGATATTATGGAAAAA TCTcagaactttcaaaatatttcttgtattgcACTCAAAGTCATGTGATA AGGCTGGGCtttaaaaattgttggtttgccgtcacccaaccctagatttt ggaggtgggtccatcggaattattttttttttggcgatttatgaactttt tgtccatggaagggttaacagtctgtttacatttaggtaattttgaataa aaaacagaagtacTAGCAGGGAATtcacgattcttatgcttgagacaaac aagatacgagttttgattttttattgttcgaagtttttgaaggaaaaaaa atcttcttttaaaTGGCAATAAAATCCAGCCTAACCAGTACATcaattta tcattgattgttttttaaaacttaaaaatgataatcaaaCGACTGATTTA ATCAATCAAAAACAATAATGGATAAATAATCGACGTccaaaaaattgtga gtattccaATAATATTGATTTTATTATCCGACGTGCGTAAATAGCGNTAA ATTGTGAGTAttccaataaaattgattttattatcCGACGTGCGTAAATA GCGatatttgattggcttcttggctatccaatatttttgaatatatagct tccatggaggctacattttcaaaaattgacgtcacacaacaAGTTCAATG ACAATTGTGCATCTTTGTGATAAAgataagacttttgaataaaaaactgc caagaaaccagatttacAAGCTTACAGTATTATGAATTAtatttgaaaac gagaaattctcatacaatatgaaaaatattggattcgactttgtccaata actgcttaatatTGTTTGATATTATTGATTAGAAATTGATAGGGCCAAAG GGATAGAAAATTAAAAGGCAAAGTTTTTGTGTACTAGAAAGAGATAAGAC TTctaaataaatatatttatGTACAAAATTGCTAGGAACTGCCTATAAAA AAGTCAATTGTCACTACTTCACAAAATCATGTATAAAAATCTCAGGAACT ATTTATATAGAAAGATAAATACTAATATTTATGTACAAAATTGCTAGGAA CTGCCTATAAAAAAGTCAATTGTCACTACTTCACAAAATCATGTATAAAA ATCTCAGGAACTATTTATAAAGAAAGATAAATACTAATATTTATGTACAA AATTGCTAGGAACTGCCTATAAAAAAAGTCAATTGTCACTACTTCACAAA ATCATTTATAACAATCTCAGGAACTATTTATATAGAAAGATAAATACTAG AAAAAATGATATTACATATGTACCTATTTTCTACGGTAAATTTATATTTA AACTTTAGGACAAGATGATAGTGGATGATACAAACTTGTCGTTATAGTCA AAATACTGTAATCACAAAAATGGattaagtaaataaataaaaaatacata aataaatataaaaaaacaggaACATTCCATGGacaaatagaaaaaacaag GAGACCCCAATTTTACAATGACACATTTCTCTTACATCGGGATTGAACTT TGGGCTTCCCTAAAATTATAAACAACTTACTTGGatctgaaatttttgaa aaatatgttttgttttataatgatagaaagaaaaagaattcaCTAAAATT ATCTAAATAATTGTCACTTTAAttatagaaattttagcgagactaatttt agcgttttagcgagttttccctattttcgctaaaataaatctcgctaaaa cacaccgaatcgacagatcgctaaaaNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNGCgctaaatttctggttatattgccttgatac atttttatcaataggaagggtttcagtgcatagaaatgctagaaaacgaa ctcagtcaataatgtaagtTCGCGAGTgttcgctaaaatttatacacgcg aaattttttgaaatcatgactcgctaaaataaatccaaaaaagacCAAGA TTTTCCTGCTGCTTCGCtgtacgctaaaattagtctcactaagatttcta cgattaaagtatttaaAGACATCTTTTAAGTGATTTGATCACTTTTAGTT TATTCATTAGGCTATTGTATTTCAGTTTTTGTTCTTCATCTTTTGGCACA GTTGAAATACCAGTGTTTTTCTTAAATGAGCAAATTTCCAAACTCTGAAG CTGAGATGCCAACTCTTCTTCCCTCTTCTTTAACAAAACCTCAAGTTGGG CACAAACGTCTTTAAAATTGTTTTGCATCTCTTCTGAAAACTTTGCCTTC AGGATACTCTTGAACTTGGCATACTGAGTGATCAAATCATTTTTTCCAAG AATATCCTGGAAATGCTTTGCTGTTTTTGAATTTGCAATGGGGTCTGTGA TTTCTAAAACAATACCTGTGGACAAGGgaaaaaattacaataatttaaat ttgTTGGGAATTcaataatttgtaaaatttagtTTAATGGAAACTTAATT TGGTGGTTGATTCAAATTTACCCTTTAAAttacttactttttttctttcc ttttgattggtttgatcTAGATGTGCGAGGGCATTGTTTTGCTTCAGCTA TAATATAAAAATGTTAGGattagaaaataaatgaaaCTTTGTACATGCTT TCAAACAGTTTTCCTTGAAAGAAAAGCTATATTCACCTTCTTGTTCATTT GTTGGTGCTTTTATTGTTGATTGTTGATCTGTCTGGGGATCAGCTTCATC TATACAAAGAAttttatgttaaagttgtttcTGATCCTTTTGAGATATAG AAAGGAAAATTTAATCTCAGctattaaataaaaaatgtgAAATAGTTGTG TACATTAATTTAAGTTGTTTTGGGAAGGTAAAGATAGAAAGAGGCAAGTG AAGTGCTCCTAGACAGTGGAGGGGAAAATTAACCAAGTTAATGTATAATC AAGTGATTCCCTACCTTCGCTCGAGTCTTCATTGGCATTGACAGGGAGTG ATTTCGAACAACATGGCATATCTTGATTTTCTAGGGAGTTTAAAATATTT AGCTTTTAGATATGATTCTTTGAACTTTCTAACTAGCATTGCCACTGTTA CACTTTTAAACAAttataaattgtttttgaaaaaaaaagattagcaATAA ACTCACCTGTATCATATTCATTATATTTAGATGTCAGTTCCATTCTTGCC AAAGGAGTAATTGGTGTTGTTGCTGAAGTAACTGGAATTCATGTGGTAAG AAATTAATTTCTAAATTACTTTTCTTTTCATATTACTATTTTTATACATG ACTATGGAAAGAGATTAAATGGGTTTGGGCAAAATCCTCAAAAAGCTTTG GAACTCTTCTTCCTCGTTATTTATATAGTTATTATCGTCAATCTGTAAGT TAGCTATTTCAGTTTGAAGCTGTGATCACTTACCttccaattttttgttt atagacTTGGGAGTTGAAGTTGTGCAGTCTGTTGTTAATCTAGCTACATC CTGATCTTGTTCACCGCATGCTGTCTCTTGTTCGACCATCACTGCTTGGT CTAAATATAATAAATTCAAATCAATTCGTTGTAAGCAAAAGGTTAGTATT TCTAGCAGCTGTCTACTTGGTTGAAACTGCTTTTAAAATAAATCTAGCAT TACCTTCGTCTCCCAGACTAAGGTTCTCTTCATCTCCAAATACCTGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00037347TCONS_00037347Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001616supercontigsc0001616:15927..21274 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.78 0.87 0 0 10.28 7.33 4.91 5.56 3.77 6.89 5.2 4.14 2.66 3.89 3.77 5.13 6.11 3.75 3.39 5.36 6.42 6.32 2.44 3.13 0.84 2.9 3.73 4.65 3.09 2.69