XLOC_021895 (gene) - C. hemisphaerica

Overview
NameXLOC_021895
Unique NameXLOC_021895
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001562:24317..27879+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021895 ID=XLOC_021895|Name=XLOC_021895|organism=Clytia hemisphaerica|type=gene|length=3563bp|location=Sequence derived from alignment at sc0001562:24317..27879+ (Clytia hemisphaerica)
taAAAGAAGATGGCAATCCTAGCCCAATGAGGACCCCAAGGAAATCATGG
TCGACCGAAGAAGATGCCATAATACAATCTGCTTTGTCTAATGGGACTCC
ATTCAAAGACATTAACGTTGACGCAAGTCCTCGACAGATTCGTGACCACG
TGAGGCATATTAAACGTAAAGGCCGAAACAGCTCGGACAAAGAGAGAGTA
ACAATACCTGTATCTGCAACCCTTGTGAGttcaatttcattgtttcttta
agAATAAATATGATCAGGAAGGGTAGCATTTGTTGTGTATTTTCTACTGT
GGAATCGCGCAGTTCCAACTTTTATTCTTCGAACTAATTAGCCTATTTAA
TTCACTATACGGGGGTGGGTTTGACGACCTTTTCTTAGCTCAAAATCGTT
TTCGCCATCTTTCTAGAACATGCATTTAAACTGTGAATATATTATTTAAA
CCCCTGGAAAAAATTCTATACCCACTTTATTGAAGACCGTGCTTTGAGCT
CCGTCCCTTGTCGAAAAAAGGCAAAAGTGAAATAGAGCTAAAACGAtcaa
aaatcactaaaaagggCCAGAATTGGCCTACTTCAAAGGTTAATATCGTT
ACTAGGGACATAGCTAGAAGCCTGTTCTTTATCCAGAGTCTATGATAAAT
CCTTGATACAAACAGCTGCTATTGCCACAAACAGCatatttttttaagtt
tcttcattttcatgtacTTCTTGTAGAATGAAGAAGATGAACATGATCAC
AGCACGATACGGATGGCCCCTAGGTCTCCTCCAAGGATGGAAATATTTCA
CGTAAGTGCTTAGAAAAGATGATTTCCCGTCCCcatgaaactttttttaa
ttcgttatgtgcgttaaaatttttctttttccgtGCTACAACAACAtctt
caacatttttcaaatagtgTGCTTCTACAGTGTGTCCGGACAAAATTTAt
ctaaagaaaaatcttttacgTTCAATTTCTTTTAATGGCGTCtattaggc
tatttttctcactcaagtgagttacggcatgtccaaagaaaaagtgaacc
agttccactcattttcaaaatgtcgaacatagctggaaagaagcgccttg
tgatgtagatcaacgtgataggtgttagaaaaatttaacttaaggctata
agaagttatagcccaaaaacctgtattatgacgtcataaacattacataa
cattacgtcataaaactaaaaatttgaatatctcgtgaactaaaagtcat
ataaacgtcaaattttgaccacaaatagataTTGATGTTAGAAAATTTCT
GAGTTAAAAATCCTTTGaaaataatgatgacgtcatttatNAATAGATAT
TGATGTAAGAAAATTTCtgagttaaaaatcttttgaaaaaaatgatgacg
tcatttattatagccaaaaatcgaaaattgcttaaaaatgctgacgtcat
catttttcaggagatttcgaaaattttactTCTAGAGAATTACGATATAT
TTGTTCTGTCAAAGTTACATATTGATATCATTAATAGTTTATgagttatt
taaattttaaatttcgtgaCGAaatgttacgtaatgtttatgacgtcata
atataggtttttgggctataacttcttatagccttaagttaaatttttct
aacacccatcacgttgatctacatcaTATGGCGCTTCTTTTCAGCTaggt
ttgacattttgaaagtgagtggaactggttcacttttaccttggacatgc
cgtaactcacttgagcaCAAAGAATTAATAAAGCTACATAGATATCTTTT
GAATAATCAACGAATTTCCGTGTTGCAGCAATGCAGTAAAATTCCTGAGG
GCGACTTTTTTGAggtctttattttttttgcctcCTTCGTTTAGACTGAG
GGAGATAGACACTCTTTATGGCCGCCAGTTGATGTGCTAACACTTGAAAA
ATATGGTCAAGATTTCATTGACAAGAAACAGAAAATGAACGATAAATCNG
TGGTAACACTTGAAAAATATGGTCAAGATTTCATTGACAAGAAACAGAAA
ATGAACAATAAATTCATTAAACAACTGGGTTATctaagtgaaaaatattc
cttgCAACAGATTAGATCAAGAGTGCAACATCAAagaaacaagcaagcaa
aggaGAAGGTTGGTAACTTTTTAAGTGAGATGATTACCGCTGAACCTACC
GAAGTCTCTAAAATTAAAGTGAATCCTCTAAGAACTATTTGCTAACAAGT
GCCGTTTTTGGACGAAACTTGAAGTCCTGTAAATTAACCCATTCCCGTCC
GTTCGTCCATCCGCCTGaacgttcgtctgttaccagcttttctcgggatc
agcttagttttttttctaattttttgcacaatgattcAAAATGGCAATGT
CAAAAATGTGAATGATGCCCAATTTTagataacaatttttttttttttgg
agggGGGGGGCAAAAAACTGTCTAAAATGGagctttttggactttgtgcg
aaaaattgctttgtaagtttttcctgattttttgcacaaagatgacGGCT
CGGTTCTCTAAACGCTGGCTGAAACGATTTTTCACGGACATTTTATTGGC
CATAGAAATTGGATTTTCgtaattgaatttatttttgtttaactATTTAC
ATGAATAACCAGCTTCTCTCACTATTCGCTAACTATTTTTTCTGAATCTT
TGCATCTGTatcaatgcccaaaacttgcgGTGCCTGATTTCGGAAAAGAA
CTACCTTAAaataggttttttggacttaatTTCTGGATTTCTTCCCCATA
ATAGATATGCAGTAGTACATACTTCCGAAAATGTGCTGAAacctattttc
gaaaaaaaaaattttacgacCTGTAGAACTGGCTGGTTCAACTGATATAA
TTGTTCCGATATAGAAAAAGTTCTAAATGGTGATGACTAAATTTaataat
tatttcattttatttgcaGTGAAATAAATCTTTTGTATTCGTAAAATTCT
TAGTAATAAtggccggaacagccgaaagcTGTCATAAAACGGTTCTACTT
CATATTTACAAGCTCTAGTCTGTACTTCCTGTTGTTGTCATTTAATCATC
AGGCAGGTCCATTTAGCATATTGCTTGTTATACTTGGATCTGGTAGTTTA
AGTTCGACGGGGTTAAGTTCATTGAGATTCTACCTGAAGGTTAATTAATT
AAATGTAAATTATTTGTTTATAGGATGGAGAAAAGTGATTCTACAACAAA
GTGATTGGACATCATGATCCTGTTTTCTTATATTTGTAACATATTTCTTT
TGTCTATCGTGCGTTAAGGGAAGAAAATCTCTCGTTTTCGAGACTTACTC
CTAAAACTAGCAATCCCAAGTCAAAATAGGCTATTCTATTATAGGTGAAT
AGCATTGATAGGGCAATTTTTTCCGTCCATCCTTGGACTACGTTTTTGGT
ATAACTTGAATTGTTTTGCTACCAGGTTTTCCATTCTTTGGGAGANgcta
gtgcactgtaagggtaggaaattacaaaactgcactgaactgcactgtaa
gggtaggaaattg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00037046TCONS_00037046Clytia hemisphaericatranscript
TCONS_00037047TCONS_00037047Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00037046-proteinTCONS_00037046-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001562supercontigsc0001562:24317..27879 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.44	4.97	1.93	1.42	7.16	5.5	12.41	15.44	10.93	9.73	7.51	5.7	8.1	11.37	10.3	17.14	19.33	18.19	10.01	15.41	20.75	16.5	8.66	8.61	0	0.23	25.26	22.22	22.27	18.18